Click here to switch to the map view.

The map label for this gene is 57233833

Identifier: 57233833

GI number: 57233833

Start: 1270486

End: 1272015

Strand: Direct

Name: 57233833

Synonym: DET1403

Alternate gene names: NA

Gene position: 1270486-1272015 (Clockwise)

Preceding gene: 57233843

Following gene: 57233832

Centisome position: 86.44

GC content: 49.35

Gene sequence:

>1530_bases
ATGCACTGCCTGAAACGGATTGCTATTTCCGCCATTCTGGCTTTGGGGCTTTTGGCAGGCCTCCTGCCCCAAACACCGCT
TAGTGCTGCCTCCACCCATGAATACTGGGCGGTAGTAGTGGGCATTTCGGATTACCAGAAAATTACAGATGTATCAGGCT
TGGCCAACGGCGCCCAAAAATTCGCAGCTTCCCTAAAGCAAGCTTGGGGCGATGACCATGTAAAGCTGCTGACCAACAGC
AACGCTGATAAATCTTCTATAAAGTCCGCCCTGGACTGGATGATAGGCCAGGAAGATGACAATGATACAGTGGTCTTTTT
CTTTGCCGGACACGGTGACAGCCAATCATATATAGCCCCTTATGACGCTTATTATGTTTCGGAATGGATTTCAAGCCAGG
AGCTTTCCAACTGGCTCGCGCCGCTGGAATCCCATTATCAGGCTGTAATACTGGAATCCTGCTATTCGGCCGGATTTGCT
GATGATTTAAACCAAACCGGGCGGGTAGTTCTCTATTCGTCACTGGCAGAAGAAGTCTCCTGGGCAGACGGGGACAGCGG
CCTTTTTTCCGGATACATAAATGACGGTCTCAGCTATGTGCCGAATGCGGACATAAACGGTGACGGTCTGATATCTCTGG
AAGAGCTCTTCTTCTATGCCCAGCCCCGCACTACAAATGAGTCCCGCTTAGCTTTATCTCTGCAGCATCCCTTCCTGTCA
GACGGCATAGGCGGAGAGCTTAGCCTTATCGGCAAGCTGCTTCTGACCACCTCCATACCTATAAGCGGCAACTATAACTA
CATAATAGTAGACGGCCAAACCTATTCACTCAGCTACACGCAATTAAATTTCACTCCCGGTACTACCCATGAGATTACCG
CTTTGAACATAGATGCCCTGCCAGGGGTGCGTTATTTTTTCAATAGCTGGGCAGACGGGGTTACCTCTGCCAGCCGTTCA
TTTGTCAGCGGGGCTAACCTTGAGGCAGTTTATTCCCGCCAGTATCTTTTAACAATAGACTCCCCTACCACCGCAGTCAG
CGGCAGCGGATGGTATGACCAGTACACCTTTGCCAACCTTTCAGCCCCGGATATAGAAGAAGGCGGTATCCGTTATACAT
TTACCGGCTGGAGCGGTGATATAACAGGACCTTTTGACAGTACCCGTATTGTGATGGACAAGCCCAAAACTGTAAAAGCG
AACTATGATATTGAATACCTGCTGAATTTGTCTTCCCCGTACGGCACACCTGAAGGCAGCGGCTGGTATGCCGCCGGCAG
CACAGTGAAACTAAGCGCACCTAAAGCGGAAGGCTTTTTAATCCGCCAGGTATTTGAAAGCTGGAGCGGAGACTATACCG
GTACAAATGCCAATGCTGTTATCACCCTTAACAAACCCCTGAATATCTCCGCCAATTTCAAGGCAGACTATACTTTCCTG
TATATTGCCATTGGACTGGGGGCAATTGTGATTGGCTGGATAATACTGGCCGTATCCAGACGCCGGAAAATCTATTACAA
TACTATCTGA

Upstream 100 bases:

>100_bases
CTGAATATCACCAGAGGCAATTTGCCTGTAACCACTCAGGTTATGTTACTGCAGCCCTGAAACCCGGAAAACAAGAGCTG
CGCGGAAGGATAAGCGCTGA

Downstream 100 bases:

>100_bases
CAATATTCCCTGTTTTTTGAGAAAAGGATAATACAAAGCCCGCATGGAAGCATATTTAGATATTGAAACAACCGGCCTTT
CGCCTTATCAGTCAGAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MHCLKRIAISAILALGLLAGLLPQTPLSAASTHEYWAVVVGISDYQKITDVSGLANGAQKFAASLKQAWGDDHVKLLTNS
NADKSSIKSALDWMIGQEDDNDTVVFFFAGHGDSQSYIAPYDAYYVSEWISSQELSNWLAPLESHYQAVILESCYSAGFA
DDLNQTGRVVLYSSLAEEVSWADGDSGLFSGYINDGLSYVPNADINGDGLISLEELFFYAQPRTTNESRLALSLQHPFLS
DGIGGELSLIGKLLLTTSIPISGNYNYIIVDGQTYSLSYTQLNFTPGTTHEITALNIDALPGVRYFFNSWADGVTSASRS
FVSGANLEAVYSRQYLLTIDSPTTAVSGSGWYDQYTFANLSAPDIEEGGIRYTFTGWSGDITGPFDSTRIVMDKPKTVKA
NYDIEYLLNLSSPYGTPEGSGWYAAGSTVKLSAPKAEGFLIRQVFESWSGDYTGTNANAVITLNKPLNISANFKADYTFL
YIAIGLGAIVIGWIILAVSRRRKIYYNTI

Sequences:

>Translated_509_residues
MHCLKRIAISAILALGLLAGLLPQTPLSAASTHEYWAVVVGISDYQKITDVSGLANGAQKFAASLKQAWGDDHVKLLTNS
NADKSSIKSALDWMIGQEDDNDTVVFFFAGHGDSQSYIAPYDAYYVSEWISSQELSNWLAPLESHYQAVILESCYSAGFA
DDLNQTGRVVLYSSLAEEVSWADGDSGLFSGYINDGLSYVPNADINGDGLISLEELFFYAQPRTTNESRLALSLQHPFLS
DGIGGELSLIGKLLLTTSIPISGNYNYIIVDGQTYSLSYTQLNFTPGTTHEITALNIDALPGVRYFFNSWADGVTSASRS
FVSGANLEAVYSRQYLLTIDSPTTAVSGSGWYDQYTFANLSAPDIEEGGIRYTFTGWSGDITGPFDSTRIVMDKPKTVKA
NYDIEYLLNLSSPYGTPEGSGWYAAGSTVKLSAPKAEGFLIRQVFESWSGDYTGTNANAVITLNKPLNISANFKADYTFL
YIAIGLGAIVIGWIILAVSRRRKIYYNTI
>Mature_509_residues
MHCLKRIAISAILALGLLAGLLPQTPLSAASTHEYWAVVVGISDYQKITDVSGLANGAQKFAASLKQAWGDDHVKLLTNS
NADKSSIKSALDWMIGQEDDNDTVVFFFAGHGDSQSYIAPYDAYYVSEWISSQELSNWLAPLESHYQAVILESCYSAGFA
DDLNQTGRVVLYSSLAEEVSWADGDSGLFSGYINDGLSYVPNADINGDGLISLEELFFYAQPRTTNESRLALSLQHPFLS
DGIGGELSLIGKLLLTTSIPISGNYNYIIVDGQTYSLSYTQLNFTPGTTHEITALNIDALPGVRYFFNSWADGVTSASRS
FVSGANLEAVYSRQYLLTIDSPTTAVSGSGWYDQYTFANLSAPDIEEGGIRYTFTGWSGDITGPFDSTRIVMDKPKTVKA
NYDIEYLLNLSSPYGTPEGSGWYAAGSTVKLSAPKAEGFLIRQVFESWSGDYTGTNANAVITLNKPLNISANFKADYTFL
YIAIGLGAIVIGWIILAVSRRRKIYYNTI

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55435; Mature: 55435

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCLKRIAISAILALGLLAGLLPQTPLSAASTHEYWAVVVGISDYQKITDVSGLANGAQK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
FAASLKQAWGDDHVKLLTNSNADKSSIKSALDWMIGQEDDNDTVVFFFAGHGDSQSYIAP
HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEECC
YDAYYVSEWISSQELSNWLAPLESHYQAVILESCYSAGFADDLNQTGRVVLYSSLAEEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEHHHHHHC
WADGDSGLFSGYINDGLSYVPNADINGDGLISLEELFFYAQPRTTNESRLALSLQHPFLS
CCCCCCCEEEHHHHCCCCCCCCCCCCCCCEEEEEHEEEEECCCCCCCCEEEEEECCCCCC
DGIGGELSLIGKLLLTTSIPISGNYNYIIVDGQTYSLSYTQLNFTPGTTHEITALNIDAL
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEEEECCCCCCEEEEEEECCC
PGVRYFFNSWADGVTSASRSFVSGANLEAVYSRQYLLTIDSPTTAVSGSGWYDQYTFANL
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEECCCCCCCCEEEECC
SAPDIEEGGIRYTFTGWSGDITGPFDSTRIVMDKPKTVKANYDIEYLLNLSSPYGTPEGS
CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEECCCEEEEEECCCCCCCCCCC
GWYAAGSTVKLSAPKAEGFLIRQVFESWSGDYTGTNANAVITLNKPLNISANFKADYTFL
CEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCEEEE
YIAIGLGAIVIGWIILAVSRRRKIYYNTI
EEHHHHHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MHCLKRIAISAILALGLLAGLLPQTPLSAASTHEYWAVVVGISDYQKITDVSGLANGAQK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
FAASLKQAWGDDHVKLLTNSNADKSSIKSALDWMIGQEDDNDTVVFFFAGHGDSQSYIAP
HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEECC
YDAYYVSEWISSQELSNWLAPLESHYQAVILESCYSAGFADDLNQTGRVVLYSSLAEEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEHHHHHHC
WADGDSGLFSGYINDGLSYVPNADINGDGLISLEELFFYAQPRTTNESRLALSLQHPFLS
CCCCCCCEEEHHHHCCCCCCCCCCCCCCCEEEEEHEEEEECCCCCCCCEEEEEECCCCCC
DGIGGELSLIGKLLLTTSIPISGNYNYIIVDGQTYSLSYTQLNFTPGTTHEITALNIDAL
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEEEECCCCCCEEEEEEECCC
PGVRYFFNSWADGVTSASRSFVSGANLEAVYSRQYLLTIDSPTTAVSGSGWYDQYTFANL
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEECCCCCCCCEEEECC
SAPDIEEGGIRYTFTGWSGDITGPFDSTRIVMDKPKTVKANYDIEYLLNLSSPYGTPEGS
CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEECCCEEEEEECCCCCCCCCCC
GWYAAGSTVKLSAPKAEGFLIRQVFESWSGDYTGTNANAVITLNKPLNISANFKADYTFL
CEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCEEEE
YIAIGLGAIVIGWIILAVSRRRKIYYNTI
EEHHHHHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA