| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is pncB2 [H]
Identifier: 57233798
GI number: 57233798
Start: 1289063
End: 1290064
Strand: Direct
Name: pncB2 [H]
Synonym: DET1418
Alternate gene names: 57233798
Gene position: 1289063-1290064 (Clockwise)
Preceding gene: 57233807
Following gene: 57233797
Centisome position: 87.71
GC content: 55.09
Gene sequence:
>1002_bases ATGCCTGTTAAACCGAAGTTCAATATACCCGGGAACCTGCTCTCAGGTGATACCACTGATATTTATTTTGCCCGTACGGT GGAAATACTGGCTAAGGAAAACCAGAACCCGGAGACGGTAATGGAAGTATTTACCACCCGCCCCGGTATTCTGTGCGGCC TGAGCGAGGCTGTAGAGCTTCTGCAGGCGGTATTACCGGCGGGTGAGGGTGAAATATGGGCTTTGGAAGATGGCGACCAG ATTTCCGCCAAGGAAGTTGTGATGCGTATCAAAGCTCCTTACCTGAGCTTCGGTCTTTACGAGACTGTTTATTTGGGTAT GCTGGCATCCGGCACAGGCTGGGCAACCGCCGCCCGTGAATGTGTTGAAGCGGCCGGGGATATACCCGTTACCAGTTTTG GTGCCCGCCATATTCACCCGCTGGTTGCCGGACGGATGGATTATGCCGCCATGATAGGCGGGTGCAAAGGCTGTTCGTCT ATTGAAGGGGCGCGCCTCTGGGGCATCAGCCCTTCGGGCACTATTCCCCATTCCCTGATACTGGTTATGGGTGATACCCT GAAAGCTACCCTGGCCTTTGACAAACACATGCCGCCCCAAGTACCCAGAGTAGCTCTGGTGGACACCTTCAAGGACGAGG TGGAAGAAAGCCTGCGGGTAGCCGAAGCCATGGGACAAAGGCTGGACAGTGTCAGACTGGACACCCCCTTTGAGAGAGGC AGGGTCACGGCTGACCTGGTTAAAGAAGTGCGGGCTAATCTGGATATGGCCGGACACAATCACGTCAAGATATTCGTTTC CGGCGGCCTTACCCCGGAACGTATCCGCTACTTCGCAGAGAATAACGCCCCGGTAGACGGCTACGGCACAGGCAGTTATA TAAGCGGCGCCCGCCCCATTGACTTCACTGCAGACCTGCACGAAATTGCGGGCAAAGCGGTAGCCAAGCGGGGACGTATT CCCGGTCTATCCCAAAATCCCCGCCTTAAAAAAGTGCGTTAA
Upstream 100 bases:
>100_bases TCCGTGACCAGGAATCTATTGACGCTGCCAACAAGTACAATATAGCTATGGTATTTACCGGTACCCGCCACTTCCGCCAT TAGAAAGAACCGGAGGAATT
Downstream 100 bases:
>100_bases TATTCCCCGTGATACTGCTTAAAGCGGCTCTAACCAGCCGCTTTTTTATTTGACAGAAAAGCCCGCCTGAAGTATTATTC AGTATATTCTGATTTTTCTG
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase pncB2 [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPVKPKFNIPGNLLSGDTTDIYFARTVEILAKENQNPETVMEVFTTRPGILCGLSEAVELLQAVLPAGEGEIWALEDGDQ ISAKEVVMRIKAPYLSFGLYETVYLGMLASGTGWATAARECVEAAGDIPVTSFGARHIHPLVAGRMDYAAMIGGCKGCSS IEGARLWGISPSGTIPHSLILVMGDTLKATLAFDKHMPPQVPRVALVDTFKDEVEESLRVAEAMGQRLDSVRLDTPFERG RVTADLVKEVRANLDMAGHNHVKIFVSGGLTPERIRYFAENNAPVDGYGTGSYISGARPIDFTADLHEIAGKAVAKRGRI PGLSQNPRLKKVR
Sequences:
>Translated_333_residues MPVKPKFNIPGNLLSGDTTDIYFARTVEILAKENQNPETVMEVFTTRPGILCGLSEAVELLQAVLPAGEGEIWALEDGDQ ISAKEVVMRIKAPYLSFGLYETVYLGMLASGTGWATAARECVEAAGDIPVTSFGARHIHPLVAGRMDYAAMIGGCKGCSS IEGARLWGISPSGTIPHSLILVMGDTLKATLAFDKHMPPQVPRVALVDTFKDEVEESLRVAEAMGQRLDSVRLDTPFERG RVTADLVKEVRANLDMAGHNHVKIFVSGGLTPERIRYFAENNAPVDGYGTGSYISGARPIDFTADLHEIAGKAVAKRGRI PGLSQNPRLKKVR >Mature_332_residues PVKPKFNIPGNLLSGDTTDIYFARTVEILAKENQNPETVMEVFTTRPGILCGLSEAVELLQAVLPAGEGEIWALEDGDQI SAKEVVMRIKAPYLSFGLYETVYLGMLASGTGWATAARECVEAAGDIPVTSFGARHIHPLVAGRMDYAAMIGGCKGCSSI EGARLWGISPSGTIPHSLILVMGDTLKATLAFDKHMPPQVPRVALVDTFKDEVEESLRVAEAMGQRLDSVRLDTPFERGR VTADLVKEVRANLDMAGHNHVKIFVSGGLTPERIRYFAENNAPVDGYGTGSYISGARPIDFTADLHEIAGKAVAKRGRIP GLSQNPRLKKVR
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 35975; Mature: 35844
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKPKFNIPGNLLSGDTTDIYFARTVEILAKENQNPETVMEVFTTRPGILCGLSEAVEL CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECHHHHHHH LQAVLPAGEGEIWALEDGDQISAKEVVMRIKAPYLSFGLYETVYLGMLASGTGWATAARE HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH CVEAAGDIPVTSFGARHIHPLVAGRMDYAAMIGGCKGCSSIEGARLWGISPSGTIPHSLI HHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEE LVMGDTLKATLAFDKHMPPQVPRVALVDTFKDEVEESLRVAEAMGQRLDSVRLDTPFERG EEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC RVTADLVKEVRANLDMAGHNHVKIFVSGGLTPERIRYFAENNAPVDGYGTGSYISGARPI CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DFTADLHEIAGKAVAKRGRIPGLSQNPRLKKVR CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PVKPKFNIPGNLLSGDTTDIYFARTVEILAKENQNPETVMEVFTTRPGILCGLSEAVEL CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECHHHHHHH LQAVLPAGEGEIWALEDGDQISAKEVVMRIKAPYLSFGLYETVYLGMLASGTGWATAARE HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH CVEAAGDIPVTSFGARHIHPLVAGRMDYAAMIGGCKGCSSIEGARLWGISPSGTIPHSLI HHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEE LVMGDTLKATLAFDKHMPPQVPRVALVDTFKDEVEESLRVAEAMGQRLDSVRLDTPFERG EEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC RVTADLVKEVRANLDMAGHNHVKIFVSGGLTPERIRYFAENNAPVDGYGTGSYISGARPI CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DFTADLHEIAGKAVAKRGRIPGLSQNPRLKKVR CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]