Click here to switch to the map view.

The map label for this gene is yutI [H]

Identifier: 57233705

GI number: 57233705

Start: 1462222

End: 1462440

Strand: Direct

Name: yutI [H]

Synonym: DET1632

Alternate gene names: 57233705

Gene position: 1462222-1462440 (Clockwise)

Preceding gene: 57233572

Following gene: 57233691

Centisome position: 99.49

GC content: 49.32

Gene sequence:

>219_bases
ATGCTGGAAAAAGTGGAAGCCGTTCTGGATAAAATCAGACCGGCCCTGGAAGCCGATGGCGGCAATGTTGAACTGGTAGA
AGTTGTGGACGGAGTAGTAAAAGTAAAACTGGTGGGCGCCTGCGCCGGCTGCCCCATGTCTACAATGACCCTGAAAAACG
GCATTGAAAAAATCTTGAAGCGCGAAATACCCGAAGTCAAAGAAGTAGTGGCTGCTTAA

Upstream 100 bases:

>100_bases
AATTCGCTTATTTCAGGGGCAAATTGACACCATTTCCGGGCTATGGTACTGTAAATTATAGGTGTTTTAATAATTTTTAT
ACTGCTGGAAGGAGCTACTA

Downstream 100 bases:

>100_bases
GGCAGCCACTCTCTTTTTATATTCAGTTTAAACCCCGGTTTATACCCTCTTACAAACCCCTAGTCTTTTTCCATCTCAAA
GGCCTTGTGTATAGCCTTAA

Product: NifU-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MLEKVEAVLDKIRPALEADGGNVELVEVVDGVVKVKLVGACAGCPMSTMTLKNGIEKILKREIPEVKEVVAA

Sequences:

>Translated_72_residues
MLEKVEAVLDKIRPALEADGGNVELVEVVDGVVKVKLVGACAGCPMSTMTLKNGIEKILKREIPEVKEVVAA
>Mature_72_residues
MLEKVEAVLDKIRPALEADGGNVELVEVVDGVVKVKLVGACAGCPMSTMTLKNGIEKILKREIPEVKEVVAA

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593023, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI50593019, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI50593021, Length=66, Percent_Identity=46.969696969697, Blast_Score=64, Evalue=2e-11,
Organism=Homo sapiens, GI50593025, Length=66, Percent_Identity=46.969696969697, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541876, Length=60, Percent_Identity=55, Blast_Score=75, Evalue=6e-15,
Organism=Drosophila melanogaster, GI45551492, Length=66, Percent_Identity=43.9393939393939, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643765, Length=66, Percent_Identity=43.9393939393939, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45556188, Length=66, Percent_Identity=43.9393939393939, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 7645; Mature: 7645

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKVEAVLDKIRPALEADGGNVELVEVVDGVVKVKLVGACAGCPMSTMTLKNGIEKILK
CHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
REIPEVKEVVAA
HCCHHHHHHHCC
>Mature Secondary Structure
MLEKVEAVLDKIRPALEADGGNVELVEVVDGVVKVKLVGACAGCPMSTMTLKNGIEKILK
CHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
REIPEVKEVVAA
HCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]