| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is recX [H]
Identifier: 57233616
GI number: 57233616
Start: 1439995
End: 1440639
Strand: Direct
Name: recX [H]
Synonym: DET1607
Alternate gene names: 57233616
Gene position: 1439995-1440639 (Clockwise)
Preceding gene: 57233617
Following gene: 57233607
Centisome position: 97.98
GC content: 50.7
Gene sequence:
>645_bases ATGCCAAGTATAACGGCAATAAGAAAAACCCGAGGTGCTAACCAGAGGTGCAAGATATCTCTGGACAACAAGGATTTCTT CAACCTGTCTTATAGCGTATGTGAGAGGGAAGGCCTGAAAATAGGCCAGGAATTGAGCCCCAGCCAGATTGAAACCTTAA AGCTCATTGATGACTGCCAAAGCTGTTACGAAGCTGCTTTGGGGTATCTGTCCTATCGCCCCCGCAGCCAGTCTGAGCTG GCCCAGAAACTGGTTAAGCGGGGATTTTGCAGCCGGGATATTGACTCCATACTGGCCAAGCTGAAGGAGCAGGGGCTGGT AGATGACCAGGCTTTTGCCCAGTTCTGGCATGAAAACCGCCAGTCATTCCGTCCCCGCAGCCGCAGCCTGACTTCACAGG AACTCAAGAAAAAGGGTATATCTAATGAGATAATTGAAAACGTGGTAAACACTGTTGATGACGTGGACAGTGCTTACCGG GCAGCCCTGACCAAGGCAAAAAACCTGCCCAAAGATAATTACCACCTGTTCCGCCAGCGCCTCAGCCAGTATTTGCTGCG CCGCGGATTCGGCTACGAGGTAATTAACCGTACCGTTTCCCGCCTGTGGGATGAATGCGGAAACGGTAACACAGACGAAT TGTAA
Upstream 100 bases:
>100_bases GTGATGGCGATTAATCCCTGGCTTTAAGTAAAAAGACATCTTTTTATATTGGGGCTGAGGCAGACTGTGTCTCGGCTTTG TCTTTTTTTTGGGGGATTAA
Downstream 100 bases:
>100_bases GTCTTACATAGTTACGGCTCTCTGATACCCCCGTTGAAGAGAGCTTCTAAAAGAAAGGGGTTTATATATATATGTTGGAA TTCTTTATGGAGACAGCGCC
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPSITAIRKTRGANQRCKISLDNKDFFNLSYSVCEREGLKIGQELSPSQIETLKLIDDCQSCYEAALGYLSYRPRSQSEL AQKLVKRGFCSRDIDSILAKLKEQGLVDDQAFAQFWHENRQSFRPRSRSLTSQELKKKGISNEIIENVVNTVDDVDSAYR AALTKAKNLPKDNYHLFRQRLSQYLLRRGFGYEVINRTVSRLWDECGNGNTDEL
Sequences:
>Translated_214_residues MPSITAIRKTRGANQRCKISLDNKDFFNLSYSVCEREGLKIGQELSPSQIETLKLIDDCQSCYEAALGYLSYRPRSQSEL AQKLVKRGFCSRDIDSILAKLKEQGLVDDQAFAQFWHENRQSFRPRSRSLTSQELKKKGISNEIIENVVNTVDDVDSAYR AALTKAKNLPKDNYHLFRQRLSQYLLRRGFGYEVINRTVSRLWDECGNGNTDEL >Mature_213_residues PSITAIRKTRGANQRCKISLDNKDFFNLSYSVCEREGLKIGQELSPSQIETLKLIDDCQSCYEAALGYLSYRPRSQSELA QKLVKRGFCSRDIDSILAKLKEQGLVDDQAFAQFWHENRQSFRPRSRSLTSQELKKKGISNEIIENVVNTVDDVDSAYRA ALTKAKNLPKDNYHLFRQRLSQYLLRRGFGYEVINRTVSRLWDECGNGNTDEL
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 24611; Mature: 24480
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSITAIRKTRGANQRCKISLDNKDFFNLSYSVCEREGLKIGQELSPSQIETLKLIDDCQ CCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SCYEAALGYLSYRPRSQSELAQKLVKRGFCSRDIDSILAKLKEQGLVDDQAFAQFWHENR HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH QSFRPRSRSLTSQELKKKGISNEIIENVVNTVDDVDSAYRAALTKAKNLPKDNYHLFRQR HHCCCHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LSQYLLRRGFGYEVINRTVSRLWDECGNGNTDEL HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PSITAIRKTRGANQRCKISLDNKDFFNLSYSVCEREGLKIGQELSPSQIETLKLIDDCQ CCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SCYEAALGYLSYRPRSQSELAQKLVKRGFCSRDIDSILAKLKEQGLVDDQAFAQFWHENR HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH QSFRPRSRSLTSQELKKKGISNEIIENVVNTVDDVDSAYRAALTKAKNLPKDNYHLFRQR HHCCCHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LSQYLLRRGFGYEVINRTVSRLWDECGNGNTDEL HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA