| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is mrp [H]
Identifier: 57233531
GI number: 57233531
Start: 101430
End: 102416
Strand: Direct
Name: mrp [H]
Synonym: DET0104
Alternate gene names: 57233531
Gene position: 101430-102416 (Clockwise)
Preceding gene: 57233542
Following gene: 57235080
Centisome position: 6.9
GC content: 49.04
Gene sequence:
>987_bases ATGTCTACTGAAGCTGAAATACGGGAAATACTGGGGAAAGTAAAGGTCGCAGCGGCTGGAACTACCCTGGCCGAGCTTAA TCTGTTGCGGGAGGTTACGGTTCAGCCGGATAAAATAGCAGTCAAAGTAGCCAGCGCCGGTTTATCCGAAGACAGCCGGC AGATTTTGCGGCAGGAAATAGAGCTGGCTCTAAAGCCGGTACTTAAAAAACAAACCCTTGAGATTGAGTATATTACAGTG CCTCTGAAAGATCTCAACCGGGTTAAAAAAGTAGTGGCTGTTATGAGCGGCAAGGGCGGGGTAGGGAAATCCCTTATAAC AGGTTTGTGTGCGGTGGCCTTAAACCGTCAGGGGTACAGGGTGGGCATACTGGATGCCGATATAACCGGCTCAAGTATAC CCAAAATGTTTGGTGCCAACCAGAAGATTATAGGTAACGAAGAGGCTATTTTGCCGGTTCAATCCCGCGGGGGTATTTCT TTGGTATCCACCAGCTTATTATTGACTAATCAGGATGATGCCGTTATCTGGCGCGGGCCGCTTATTTCCAAGATGATTAA CCAGTTCTGGGATGATGTACTCTGGGGAGAGCTGGATTACATGGTGGTGGATTTGCCTCCCGGTACCAGTGATGCCGCAC TTACGGTCTTACAGGCGCTGCCTATTTCGGGTATTCTGGTTGTTTTCACCCCTCAGGGTCTGGTGGAGATGGTGGCCAGA AAAGCGGTGAGCATGGCCAAAAAAATGGAAAAACCCATTATCGGTTTAGTGGAGAATATGGCTTATCTGAAAGTCCCCGA ACTGGATAAAAAGATTGAGGTTTTCGGTGCCGGACACGGCGAAGAGTTGGCCAAATCAATAGGCGTGCCTTTTATAGGTC AAATGCCCTTGGACCCTGCTCTGGCGGCCTTATGCGATAACGGGAATATTGAAAAGTACCAGCACCCCTTGCTGGATGAG CTGGAAAAGGCTATTTCCCGCTCATAA
Upstream 100 bases:
>100_bases ACTGGTATTTATTGATGTGGTGCAGTTATGCTAAGTGAACCTGACGGCGGGGCTGGCAGGTGTAGGTTTTAAATAAAATA CACGGGAGAATATCTGGATT
Downstream 100 bases:
>100_bases TAAAGTCATAATCAAGATAAAAGGGCAGACCTAAGAAGGTCTGCCCTTTTTTTATATTCGTTTAAAACTGAGGCTAAACC TGTTTTAACCATGTTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSTEAEIREILGKVKVAAAGTTLAELNLLREVTVQPDKIAVKVASAGLSEDSRQILRQEIELALKPVLKKQTLEIEYITV PLKDLNRVKKVVAVMSGKGGVGKSLITGLCAVALNRQGYRVGILDADITGSSIPKMFGANQKIIGNEEAILPVQSRGGIS LVSTSLLLTNQDDAVIWRGPLISKMINQFWDDVLWGELDYMVVDLPPGTSDAALTVLQALPISGILVVFTPQGLVEMVAR KAVSMAKKMEKPIIGLVENMAYLKVPELDKKIEVFGAGHGEELAKSIGVPFIGQMPLDPALAALCDNGNIEKYQHPLLDE LEKAISRS
Sequences:
>Translated_328_residues MSTEAEIREILGKVKVAAAGTTLAELNLLREVTVQPDKIAVKVASAGLSEDSRQILRQEIELALKPVLKKQTLEIEYITV PLKDLNRVKKVVAVMSGKGGVGKSLITGLCAVALNRQGYRVGILDADITGSSIPKMFGANQKIIGNEEAILPVQSRGGIS LVSTSLLLTNQDDAVIWRGPLISKMINQFWDDVLWGELDYMVVDLPPGTSDAALTVLQALPISGILVVFTPQGLVEMVAR KAVSMAKKMEKPIIGLVENMAYLKVPELDKKIEVFGAGHGEELAKSIGVPFIGQMPLDPALAALCDNGNIEKYQHPLLDE LEKAISRS >Mature_327_residues STEAEIREILGKVKVAAAGTTLAELNLLREVTVQPDKIAVKVASAGLSEDSRQILRQEIELALKPVLKKQTLEIEYITVP LKDLNRVKKVVAVMSGKGGVGKSLITGLCAVALNRQGYRVGILDADITGSSIPKMFGANQKIIGNEEAILPVQSRGGISL VSTSLLLTNQDDAVIWRGPLISKMINQFWDDVLWGELDYMVVDLPPGTSDAALTVLQALPISGILVVFTPQGLVEMVARK AVSMAKKMEKPIIGLVENMAYLKVPELDKKIEVFGAGHGEELAKSIGVPFIGQMPLDPALAALCDNGNIEKYQHPLLDEL EKAISRS
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI6912540, Length=233, Percent_Identity=44.206008583691, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI118572611, Length=232, Percent_Identity=39.2241379310345, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI157384956, Length=280, Percent_Identity=33.2142857142857, Blast_Score=155, Evalue=6e-38, Organism=Escherichia coli, GI87082045, Length=226, Percent_Identity=42.9203539823009, Blast_Score=169, Evalue=3e-43, Organism=Caenorhabditis elegans, GI25143050, Length=232, Percent_Identity=41.3793103448276, Blast_Score=167, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6322188, Length=243, Percent_Identity=39.0946502057613, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321347, Length=238, Percent_Identity=37.3949579831933, Blast_Score=152, Evalue=7e-38, Organism=Drosophila melanogaster, GI24667611, Length=226, Percent_Identity=38.9380530973451, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI19921440, Length=258, Percent_Identity=34.8837209302326, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI221511043, Length=222, Percent_Identity=34.6846846846847, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR000808 [H]
Pfam domain/function: PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 35354; Mature: 35223
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEAEIREILGKVKVAAAGTTLAELNLLREVTVQPDKIAVKVASAGLSEDSRQILRQEI CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH ELALKPVLKKQTLEIEYITVPLKDLNRVKKVVAVMSGKGGVGKSLITGLCAVALNRQGYR HHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCE VGILDADITGSSIPKMFGANQKIIGNEEAILPVQSRGGISLVSTSLLLTNQDDAVIWRGP EEEEECCCCCCCCHHHHCCCCCEECCCCEEEEECCCCCEEEEEEEEEEECCCCEEEECCH LISKMINQFWDDVLWGELDYMVVDLPPGTSDAALTVLQALPISGILVVFTPQGLVEMVAR HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHH KAVSMAKKMEKPIIGLVENMAYLKVPELDKKIEVFGAGHGEELAKSIGVPFIGQMPLDPA HHHHHHHHHHCHHHHHHHCHHHEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCHH LAALCDNGNIEKYQHPLLDELEKAISRS HHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STEAEIREILGKVKVAAAGTTLAELNLLREVTVQPDKIAVKVASAGLSEDSRQILRQEI CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH ELALKPVLKKQTLEIEYITVPLKDLNRVKKVVAVMSGKGGVGKSLITGLCAVALNRQGYR HHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCE VGILDADITGSSIPKMFGANQKIIGNEEAILPVQSRGGISLVSTSLLLTNQDDAVIWRGP EEEEECCCCCCCCHHHHCCCCCEECCCCEEEEECCCCCEEEEEEEEEEECCCCEEEECCH LISKMINQFWDDVLWGELDYMVVDLPPGTSDAALTVLQALPISGILVVFTPQGLVEMVAR HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHH KAVSMAKKMEKPIIGLVENMAYLKVPELDKKIEVFGAGHGEELAKSIGVPFIGQMPLDPA HHHHHHHHHHCHHHHHHHCHHHEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCHH LAALCDNGNIEKYQHPLLDELEKAISRS HHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842; 7559358 [H]