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The map label for this gene is oxaA [H]

Identifier: 38234912

GI number: 38234912

Start: 2485931

End: 2486884

Strand: Reverse

Name: oxaA [H]

Synonym: DIP2379

Alternate gene names: 38234912

Gene position: 2486884-2485931 (Counterclockwise)

Preceding gene: 38234913

Following gene: 38234911

Centisome position: 99.93

GC content: 51.57

Gene sequence:

>954_bases
GTGCTCAACTTCATTTATTGGCCAATCTCGGCCATCTTGTGGTTCTGGCATAAAGTTGTGAGCTTTGTGCTTGACCCAGG
TTCTGGCCTGTCATGGGTCTTGGCCATCGTGTTGCTGACCTTCACCATCCGAGCTTTGTTGGTCAAGCCGATGCTCAACC
AGATGCGTTCCATGCGCAAGATGCAGGAACTGCAGCCGTTGATGCAGGAGATCCGTAAAAAGTATCCCAATGATCAGCAG
AAGCTGATGGAAGAAACCCGCAAGCTGCAAAAGGAAATGGGTGTTAACCCAGTTGCTGGTTGCTTGCCGGTTTTGGTTCA
GATGCCAGTGTTCATTGGTCTGTTCCACGTGCTGCGTTCGTTTAACCGTACCGGTACCGGTACGGGTCAGCTGGGCCTGA
GCCCAGAGGTGAACCGCGAAACCGCCAACTACATCTTTAGTGCTGCTGATGTGCAGTCCTTCTTGGATGCCCGCTTGTTC
GGTGTGCCGCTGTCGGCGTTTATTTCTATGCCGAAGGAAATGTATCAAGCATTCCAGCCGGTTGATTTTACCCGTACTGA
TATTGCGCTGGTGGCAGCACCACTTATCGTGATCATTGTGCTGGCTACTCACTTTAACGCTCGGTTGTCTGTGGATCGCC
AAAAGGCTCGTCGTGAGTCTGGGCTGCAGAAGCCGCCGGCGAATGATCAGATGCAGATGCAGATGGATATGATGAACCGC
ATGATGCTGTGGTTTATGCCGTTGACTATTTTGTTCACCGGTGTTCTGTGGCACCTCGGCCTGTTGTTCTACATGGTGTC
GAATAACATCTGGACGTTCTTCCAGCAGCGTTGGATCTTTGACAAGATCGATGCTGAGGAAGCTGCCGAGATTGAGGCTA
AGAAAGCTGCCAAGCGTGCGACTGCGCCTCGTCCAGGTCAACGCCCACAGCAGAGTAAGAAGAAAAAGAAATAA

Upstream 100 bases:

>100_bases
CAAGTGCGGACCATGGCATCCCGGCGGCTACGATCCTGTGCCGGCGCGACGATCTGAGGTTCCACGTACCACTTCGACCA
CCAAGGAGTTCTGACTCACA

Downstream 100 bases:

>100_bases
CAGTTAATTCCCTGCATACCAAGCCGCCTTCCAGATTATCTGGGGGCGGCTTTGCGCTGCTGGGGGTAGGTGTTGGGTGC
TCATGCTAGCGTTATTGCGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLNFIYWPISAILWFWHKVVSFVLDPGSGLSWVLAIVLLTFTIRALLVKPMLNQMRSMRKMQELQPLMQEIRKKYPNDQQ
KLMEETRKLQKEMGVNPVAGCLPVLVQMPVFIGLFHVLRSFNRTGTGTGQLGLSPEVNRETANYIFSAADVQSFLDARLF
GVPLSAFISMPKEMYQAFQPVDFTRTDIALVAAPLIVIIVLATHFNARLSVDRQKARRESGLQKPPANDQMQMQMDMMNR
MMLWFMPLTILFTGVLWHLGLLFYMVSNNIWTFFQQRWIFDKIDAEEAAEIEAKKAAKRATAPRPGQRPQQSKKKKK

Sequences:

>Translated_317_residues
MLNFIYWPISAILWFWHKVVSFVLDPGSGLSWVLAIVLLTFTIRALLVKPMLNQMRSMRKMQELQPLMQEIRKKYPNDQQ
KLMEETRKLQKEMGVNPVAGCLPVLVQMPVFIGLFHVLRSFNRTGTGTGQLGLSPEVNRETANYIFSAADVQSFLDARLF
GVPLSAFISMPKEMYQAFQPVDFTRTDIALVAAPLIVIIVLATHFNARLSVDRQKARRESGLQKPPANDQMQMQMDMMNR
MMLWFMPLTILFTGVLWHLGLLFYMVSNNIWTFFQQRWIFDKIDAEEAAEIEAKKAAKRATAPRPGQRPQQSKKKKK
>Mature_317_residues
MLNFIYWPISAILWFWHKVVSFVLDPGSGLSWVLAIVLLTFTIRALLVKPMLNQMRSMRKMQELQPLMQEIRKKYPNDQQ
KLMEETRKLQKEMGVNPVAGCLPVLVQMPVFIGLFHVLRSFNRTGTGTGQLGLSPEVNRETANYIFSAADVQSFLDARLF
GVPLSAFISMPKEMYQAFQPVDFTRTDIALVAAPLIVIIVLATHFNARLSVDRQKARRESGLQKPPANDQMQMQMDMMNR
MMLWFMPLTILFTGVLWHLGLLFYMVSNNIWTFFQQRWIFDKIDAEEAAEIEAKKAAKRATAPRPGQRPQQSKKKKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=115, Percent_Identity=33.9130434782609, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 36528; Mature: 36528

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCHHHHCCCC
>Mature Secondary Structure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CCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]