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The map label for this gene is 38234818

Identifier: 38234818

GI number: 38234818

Start: 2379236

End: 2380000

Strand: Reverse

Name: 38234818

Synonym: DIP2282

Alternate gene names: NA

Gene position: 2380000-2379236 (Counterclockwise)

Preceding gene: 38234819

Following gene: 38234816

Centisome position: 95.63

GC content: 55.42

Gene sequence:

>765_bases
ATGCCGAATCCGTTTTCCAAGGGTTGGAAGTACCTAACCGCATCACTGGACAACAAGATCGAAGAAAACGCTGATCCCGT
TATCCAGATCAAACAGGCCGCCGAGGCTGCCAAAAAGCAGCATGCGGACATCGAGCAACAAGCAGCTTCTGTGATCGGCA
ATCGCAACCAGCTGCAGATGAAACTCAATCGACTGCTCAAGGATCAACAGTCCATCCAAGAAAAAGCCCGCCAAGCCCTC
TCGCTGAGCGACAGCGCAACAGACCCCGCAGAGCAGCACAAATACCTCAACGCAGCCGAGGTATATGCCTCGCAGCTGGT
GGGTGTGGAATCAGAGATCGAGCAGACCACCACGCTGCATCAGCAAGCTGAACAGGCCGCAGAGCAAGCAACCCAGCAGG
TTAAACAGTCAGAAGCTCGCCTACACGAGCAGCTGTCCCAGATCAATGAGCTGACCACCCAGGCGCAGCAGGCAAAAATG
CAGGAAGCTGCCGTAGCTGCAAGCGATCAGATCAACAGCATTGATCCTGACCGCGATGTGCCCACGATGGACAGCATTCG
GGAAAAGATTGAGCGTCGTTACGCCGATGCTTTAGGCTCCCAAGAGCTCATGCAGTCCTCGATGAATGAGCGCATCCACG
AGATCGAAGCCACCACCAGTGAGCGTGACATGCGTGCAAACGCCAAGCTTGATGCCATTCGTGCCCAGATGCGTGGCGAG
CTCCCCGCCGGATCGGAAGAAACCGAGCCACCAGCGGATAAATAA

Upstream 100 bases:

>100_bases
GGTTCATGTCATACAAAAACGTCGTAAACTGGTGGGCAAGGCTGTGCGCAGGCACCCAACCCACTTTCGCGTGGGGGTCC
CGTAGAAGAATCGAGGAACA

Downstream 100 bases:

>100_bases
AGCTCAAGCCTCCTTCCTAGCGGGTTAAACCCAGCAGGGGAGGGAGGCTTTTTACTATGTTGCGTAGAGGTTTTAAGAAT
TCTGATTATTAATCAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPNPFSKGWKYLTASLDNKIEENADPVIQIKQAAEAAKKQHADIEQQAASVIGNRNQLQMKLNRLLKDQQSIQEKARQAL
SLSDSATDPAEQHKYLNAAEVYASQLVGVESEIEQTTTLHQQAEQAAEQATQQVKQSEARLHEQLSQINELTTQAQQAKM
QEAAVAASDQINSIDPDRDVPTMDSIREKIERRYADALGSQELMQSSMNERIHEIEATTSERDMRANAKLDAIRAQMRGE
LPAGSEETEPPADK

Sequences:

>Translated_254_residues
MPNPFSKGWKYLTASLDNKIEENADPVIQIKQAAEAAKKQHADIEQQAASVIGNRNQLQMKLNRLLKDQQSIQEKARQAL
SLSDSATDPAEQHKYLNAAEVYASQLVGVESEIEQTTTLHQQAEQAAEQATQQVKQSEARLHEQLSQINELTTQAQQAKM
QEAAVAASDQINSIDPDRDVPTMDSIREKIERRYADALGSQELMQSSMNERIHEIEATTSERDMRANAKLDAIRAQMRGE
LPAGSEETEPPADK
>Mature_253_residues
PNPFSKGWKYLTASLDNKIEENADPVIQIKQAAEAAKKQHADIEQQAASVIGNRNQLQMKLNRLLKDQQSIQEKARQALS
LSDSATDPAEQHKYLNAAEVYASQLVGVESEIEQTTTLHQQAEQAAEQATQQVKQSEARLHEQLSQINELTTQAQQAKMQ
EAAVAASDQINSIDPDRDVPTMDSIREKIERRYADALGSQELMQSSMNERIHEIEATTSERDMRANAKLDAIRAQMRGEL
PAGSEETEPPADK

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 28303; Mature: 28171

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNPFSKGWKYLTASLDNKIEENADPVIQIKQAAEAAKKQHADIEQQAASVIGNRNQLQM
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH
KLNRLLKDQQSIQEKARQALSLSDSATDPAEQHKYLNAAEVYASQLVGVESEIEQTTTLH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
QQAEQAAEQATQQVKQSEARLHEQLSQINELTTQAQQAKMQEAAVAASDQINSIDPDRDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PTMDSIREKIERRYADALGSQELMQSSMNERIHEIEATTSERDMRANAKLDAIRAQMRGE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPAGSEETEPPADK
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PNPFSKGWKYLTASLDNKIEENADPVIQIKQAAEAAKKQHADIEQQAASVIGNRNQLQM
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH
KLNRLLKDQQSIQEKARQALSLSDSATDPAEQHKYLNAAEVYASQLVGVESEIEQTTTLH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
QQAEQAAEQATQQVKQSEARLHEQLSQINELTTQAQQAKMQEAAVAASDQINSIDPDRDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PTMDSIREKIERRYADALGSQELMQSSMNERIHEIEATTSERDMRANAKLDAIRAQMRGE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPAGSEETEPPADK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2119046 [H]