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The map label for this gene is farR [C]

Identifier: 38234816

GI number: 38234816

Start: 2377172

End: 2377558

Strand: Reverse

Name: farR [C]

Synonym: DIP2280

Alternate gene names: 38234816

Gene position: 2377558-2377172 (Counterclockwise)

Preceding gene: 38234818

Following gene: 38234815

Centisome position: 95.54

GC content: 59.95

Gene sequence:

>387_bases
GTGGTGGTGAGGGTGGACGAAACAACGGCCCCCCTGTTTCGGCAGATCGCGGCGCTGATTGAAGACTCCATCGTGGAAGG
CTCCCTCTCCTCCGGCGAGCGCGCACCCTCCACCAACGAGCTCGCAGCGTTTCACTCCATCAACCCCGCCACCGCACGCA
AAGGCCTCCAATTGCTTGTCGACGCCGGCGTGCTGGAAAAGAAACGAGGACTAGGCATGTTTGTCACAGACAACGCCGTC
GAACTGATCCGCGGCAGGCGGCGCGACGACTTCGCAGCTGCCTATCTCGCCCCGCTTGTCGACGAAGCCGTCAAACTCAC
CATCTCTAAAACCGAACTCCACAACCTCATTGACCGAGTAGCAGAAAGCCGAGGACTCTACGAATGA

Upstream 100 bases:

>100_bases
TTTGGGGCGCTGGGTTCTTTTGGGGTGTGCGTGGTCACTTTTTATTGTCGGGTGGCGCCTTTGGTTCTATGGTTAGTTAC
ATGAGTAACCAACCAACTGG

Downstream 100 bases:

>100_bases
CCACGATTCATGTCAGTGACCTGTCCAAAACCTACGGCACGGACACCAATGTGCCAGTTCTGAGCGGCGTCTCCTTCGAC
CTCACCTCGCCTGCTATCCA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator; Transcriptional Regulator Gntr Family; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MVVRVDETTAPLFRQIAALIEDSIVEGSLSSGERAPSTNELAAFHSINPATARKGLQLLVDAGVLEKKRGLGMFVTDNAV
ELIRGRRRDDFAAAYLAPLVDEAVKLTISKTELHNLIDRVAESRGLYE

Sequences:

>Translated_128_residues
MVVRVDETTAPLFRQIAALIEDSIVEGSLSSGERAPSTNELAAFHSINPATARKGLQLLVDAGVLEKKRGLGMFVTDNAV
ELIRGRRRDDFAAAYLAPLVDEAVKLTISKTELHNLIDRVAESRGLYE
>Mature_128_residues
MVVRVDETTAPLFRQIAALIEDSIVEGSLSSGERAPSTNELAAFHSINPATARKGLQLLVDAGVLEKKRGLGMFVTDNAV
ELIRGRRRDDFAAAYLAPLVDEAVKLTISKTELHNLIDRVAESRGLYE

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13962; Mature: 13962

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRVDETTAPLFRQIAALIEDSIVEGSLSSGERAPSTNELAAFHSINPATARKGLQLLV
CEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
DAGVLEKKRGLGMFVTDNAVELIRGRRRDDFAAAYLAPLVDEAVKLTISKTELHNLIDRV
HCCHHHHHCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESRGLYE
HHHCCCCC
>Mature Secondary Structure
MVVRVDETTAPLFRQIAALIEDSIVEGSLSSGERAPSTNELAAFHSINPATARKGLQLLV
CEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
DAGVLEKKRGLGMFVTDNAVELIRGRRRDDFAAAYLAPLVDEAVKLTISKTELHNLIDRV
HCCHHHHHCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESRGLYE
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA