| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234778
Identifier: 38234778
GI number: 38234778
Start: 2332109
End: 2333101
Strand: Direct
Name: 38234778
Synonym: DIP2242
Alternate gene names: NA
Gene position: 2332109-2333101 (Clockwise)
Preceding gene: 38234777
Following gene: 38234779
Centisome position: 93.71
GC content: 60.02
Gene sequence:
>993_bases ATGAGTTCGAAAAAGGTTGCAGGTTTTGCAGGTGTGGCTGCCCTCGTAGTGGCTAGTGGCGTAGGCGCGTACACGTACAC GGCGTCGCAACACGACAACGCGCCCCGCCCGCAGACCGCAACGTCTAGCGCACCAGCCGCTTCCGTCGGGTCGTTTACCA GCGCTGACGCTGGCGCATGCCTGACATGGGCAGATAACGGCGGCAAAGTATCCAAGTTCGAACAAACCGATTGCGCGGGC GAGCACCGCTTCGAGGTGTCCTCCCGCGAGGACCTCAACGCCTACCCATCCAAGGAGTTTTCCAACAACGCCGCCAAACC AGACCTGACCCGCCAGGCGCAGCTGCGTGAAGAGCTCTGCCTCAACCCCACCTTGCAGTACTTGGGTGGCACCTATGATC CGCTGGGACGTTACTCGGTCGCATCGATCCTGCCACCGCAGGATGCGTGGGATAAAGGTGACCGCACGTTGCTATGTGGT GTGCAGGCCACGGATGATTCCGGCAAGGTGATCATCACCTCTGGTAAGGCCGCCGAGCAGGATCAATCTCGTATTTTCGG CGCTGGGCAATGCCTGCTGATCGACGCCGCCAAGGCCACCCGCGTGGTCGATTGCCAGCAGGATCACCAGCTAGAGATCA CCTCGGTAGTAGACCTGCAACCTGTTTTCCCACAGGTCATTCCGTCAATTGAGGACCAAGACAACCACCTACAACAGGTG TGCACTCAGGCAGCCCGCGACTACCTTGGTGGCGACGACCCCCTCTACTACTCAACCTTGCAGCCCTTCTGGACTACTCT GCCCGATAATTCTTGGTCGGGCGGTTCTCACAGCGTGAACTGTGCACTCGTGTTCGGCCAAGAGGACGGCAACTTCGGGG TGCTGCACGGCACCGCCAAGCACGGTTTTACTATCAACGGCCAGCCCCCTGCTCCTCGCCCCGAACGTGCTCCGATTGTC AACCCCGAGGTGCTCGAAGGTACGGCTCCTTAA
Upstream 100 bases:
>100_bases CACGCACACGCAGGAGAAAACCCCATCGAGTGGTGTTCCTCGCTCTACCGCACCGACCGCTTCGCGTTAAGGACGTTTAT CACGAAGTAGTATGGGCGAA
Downstream 100 bases:
>100_bases ATCATCATGGTTAAGATTTCCCACGAGGAGTTTGAAACGCTTGTCGACGAAGCCCTCGCCGCCATCCCCGATCCCGTCGC CGACCGCATTACCAACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSSKKVAGFAGVAALVVASGVGAYTYTASQHDNAPRPQTATSSAPAASVGSFTSADAGACLTWADNGGKVSKFEQTDCAG EHRFEVSSREDLNAYPSKEFSNNAAKPDLTRQAQLREELCLNPTLQYLGGTYDPLGRYSVASILPPQDAWDKGDRTLLCG VQATDDSGKVIITSGKAAEQDQSRIFGAGQCLLIDAAKATRVVDCQQDHQLEITSVVDLQPVFPQVIPSIEDQDNHLQQV CTQAARDYLGGDDPLYYSTLQPFWTTLPDNSWSGGSHSVNCALVFGQEDGNFGVLHGTAKHGFTINGQPPAPRPERAPIV NPEVLEGTAP
Sequences:
>Translated_330_residues MSSKKVAGFAGVAALVVASGVGAYTYTASQHDNAPRPQTATSSAPAASVGSFTSADAGACLTWADNGGKVSKFEQTDCAG EHRFEVSSREDLNAYPSKEFSNNAAKPDLTRQAQLREELCLNPTLQYLGGTYDPLGRYSVASILPPQDAWDKGDRTLLCG VQATDDSGKVIITSGKAAEQDQSRIFGAGQCLLIDAAKATRVVDCQQDHQLEITSVVDLQPVFPQVIPSIEDQDNHLQQV CTQAARDYLGGDDPLYYSTLQPFWTTLPDNSWSGGSHSVNCALVFGQEDGNFGVLHGTAKHGFTINGQPPAPRPERAPIV NPEVLEGTAP >Mature_329_residues SSKKVAGFAGVAALVVASGVGAYTYTASQHDNAPRPQTATSSAPAASVGSFTSADAGACLTWADNGGKVSKFEQTDCAGE HRFEVSSREDLNAYPSKEFSNNAAKPDLTRQAQLREELCLNPTLQYLGGTYDPLGRYSVASILPPQDAWDKGDRTLLCGV QATDDSGKVIITSGKAAEQDQSRIFGAGQCLLIDAAKATRVVDCQQDHQLEITSVVDLQPVFPQVIPSIEDQDNHLQQVC TQAARDYLGGDDPLYYSTLQPFWTTLPDNSWSGGSHSVNCALVFGQEDGNFGVLHGTAKHGFTINGQPPAPRPERAPIVN PEVLEGTAP
Specific function: May play a role in septum formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential). Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35087; Mature: 34956
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKKVAGFAGVAALVVASGVGAYTYTASQHDNAPRPQTATSSAPAASVGSFTSADAGAC CCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LTWADNGGKVSKFEQTDCAGEHRFEVSSREDLNAYPSKEFSNNAAKPDLTRQAQLREELC EEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH LNPTLQYLGGTYDPLGRYSVASILPPQDAWDKGDRTLLCGVQATDDSGKVIITSGKAAEQ CCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCC DQSRIFGAGQCLLIDAAKATRVVDCQQDHQLEITSVVDLQPVFPQVIPSIEDQDNHLQQV HHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHHHH CTQAARDYLGGDDPLYYSTLQPFWTTLPDNSWSGGSHSVNCALVFGQEDGNFGVLHGTAK HHHHHHHHCCCCCCEEEHHHCHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCC HGFTINGQPPAPRPERAPIVNPEVLEGTAP CCEEECCCCCCCCCCCCCCCCCHHCCCCCC >Mature Secondary Structure SSKKVAGFAGVAALVVASGVGAYTYTASQHDNAPRPQTATSSAPAASVGSFTSADAGAC CCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LTWADNGGKVSKFEQTDCAGEHRFEVSSREDLNAYPSKEFSNNAAKPDLTRQAQLREELC EEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH LNPTLQYLGGTYDPLGRYSVASILPPQDAWDKGDRTLLCGVQATDDSGKVIITSGKAAEQ CCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCC DQSRIFGAGQCLLIDAAKATRVVDCQQDHQLEITSVVDLQPVFPQVIPSIEDQDNHLQQV HHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHHHH CTQAARDYLGGDDPLYYSTLQPFWTTLPDNSWSGGSHSVNCALVFGQEDGNFGVLHGTAK HHHHHHHHCCCCCCEEEHHHCHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCC HGFTINGQPPAPRPERAPIVNPEVLEGTAP CCEEECCCCCCCCCCCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]