| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234746
Identifier: 38234746
GI number: 38234746
Start: 2293316
End: 2294341
Strand: Reverse
Name: 38234746
Synonym: DIP2205
Alternate gene names: NA
Gene position: 2294341-2293316 (Counterclockwise)
Preceding gene: 38234747
Following gene: 38234745
Centisome position: 92.19
GC content: 47.76
Gene sequence:
>1026_bases ATGACCACTATGCGAACTGGCTCGCAAATATTCATGCGCTCGGGGCAATGGAACGAGTTATGGAAAGAAAAAAATGTTCC ACTGCGATTTACCAACCCCAACATCAGTTTTGATGGATCGGAGCGGACAAAAGCTGAAATTGAAGTAGTCGATTCACAAG AGAAAAGCCTTGTTACACGGAATATGCAGATCATTCCGTGGCAGCATGACATAGCGAATCTTCACCTGCCAGAAAGAGAT TCGCTCATACTAATGCCATGCGCCACTAGAACAGTAGGACGGCGGCTTACGGCAAGAAATATCGGATTAGCTGACACACG TGGCAATTGCGATATTTCATGGCCAGGCGTGATGATTAAAATCTATGGTCAGCAAGCTGTTACTAGTGCGCGATCCCACC AAAAAACCGCAGTGCTTTTTAGCGTGCGACGTGCCCAAGTCGCCGCGATGATATTGACGTATCCATGGCTACTGTCGGAG CCAGTTCGAGTGATAGCCCGATACTCGGGAGTCTCCGTAGGCACCGTAAGCAACGCCCTCAAGATTTTCCAAAAAGCAGG TTATCTTGCCGAAACCATGGACGGGCACCGACTAGTCAACGCGGAATTATTTCTTAGCGCTTGGGCCCGTGCGTATCCCA CAGGGCTGGGAGCAGATCTAGAGTTGCTGCGCGGAAAAGCACAACAACTGCCTCCATATAACCTTGAACATTTGGGTGTT AAGGCAAGCGAAAGCGCAGTATCAGACCACATTTCTGATGGACAATCTGCTTCGCTATACCTAGGAGAAGAAACCTTTTC ACCCAAAGTGATCAAGGAACTTAGACTGGTAAAAAACCCAGCTGGAACAATAACTTTGCGACGAGCTTTTTGGAATACGA TAGATGTCAAAGAGATTCCAGAGGCGATTGTGTACGCCGATCTTCTTAATTCTGACGATGCCCGCCTTTGGGATGTTGCT CAAATAATAAAAGCCATTATCCTTAAACGCGCAAGGGGAGACTGGTTAGGGGACCAAGATGGATGA
Upstream 100 bases:
>100_bases GTCAAAACATGCGGGCGCATCATCGTACCACGGCGATGAACAGCACTGTTCAGGAATAATGAACGTTCACTATTCCTGAA CAGTGCTGTAGGGTTGCTTT
Downstream 100 bases:
>100_bases TATTAAACGAGTTGTAACGGCACTCAGCAGTGTGGTTTCAACTGAGAAAATAATGCTCGTAGGAGCTCGATGTCGAGATA TACATCAGAAGAACATTGTC
Product: putative DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTTMRTGSQIFMRSGQWNELWKEKNVPLRFTNPNISFDGSERTKAEIEVVDSQEKSLVTRNMQIIPWQHDIANLHLPERD SLILMPCATRTVGRRLTARNIGLADTRGNCDISWPGVMIKIYGQQAVTSARSHQKTAVLFSVRRAQVAAMILTYPWLLSE PVRVIARYSGVSVGTVSNALKIFQKAGYLAETMDGHRLVNAELFLSAWARAYPTGLGADLELLRGKAQQLPPYNLEHLGV KASESAVSDHISDGQSASLYLGEETFSPKVIKELRLVKNPAGTITLRRAFWNTIDVKEIPEAIVYADLLNSDDARLWDVA QIIKAIILKRARGDWLGDQDG
Sequences:
>Translated_341_residues MTTMRTGSQIFMRSGQWNELWKEKNVPLRFTNPNISFDGSERTKAEIEVVDSQEKSLVTRNMQIIPWQHDIANLHLPERD SLILMPCATRTVGRRLTARNIGLADTRGNCDISWPGVMIKIYGQQAVTSARSHQKTAVLFSVRRAQVAAMILTYPWLLSE PVRVIARYSGVSVGTVSNALKIFQKAGYLAETMDGHRLVNAELFLSAWARAYPTGLGADLELLRGKAQQLPPYNLEHLGV KASESAVSDHISDGQSASLYLGEETFSPKVIKELRLVKNPAGTITLRRAFWNTIDVKEIPEAIVYADLLNSDDARLWDVA QIIKAIILKRARGDWLGDQDG >Mature_340_residues TTMRTGSQIFMRSGQWNELWKEKNVPLRFTNPNISFDGSERTKAEIEVVDSQEKSLVTRNMQIIPWQHDIANLHLPERDS LILMPCATRTVGRRLTARNIGLADTRGNCDISWPGVMIKIYGQQAVTSARSHQKTAVLFSVRRAQVAAMILTYPWLLSEP VRVIARYSGVSVGTVSNALKIFQKAGYLAETMDGHRLVNAELFLSAWARAYPTGLGADLELLRGKAQQLPPYNLEHLGVK ASESAVSDHISDGQSASLYLGEETFSPKVIKELRLVKNPAGTITLRRAFWNTIDVKEIPEAIVYADLLNSDDARLWDVAQ IIKAIILKRARGDWLGDQDG
Specific function: Unknown
COG id: COG4861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38084; Mature: 37953
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMRTGSQIFMRSGQWNELWKEKNVPLRFTNPNISFDGSERTKAEIEVVDSQEKSLVTR CCCCCCCCHHEEECCCHHHHHHHCCCCEEECCCCCEECCCCCCEEEEEEECCCHHHHHHC NMQIIPWQHDIANLHLPERDSLILMPCATRTVGRRLTARNIGLADTRGNCDISWPGVMIK CCEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEECCCEEEE IYGQQAVTSARSHQKTAVLFSVRRAQVAAMILTYPWLLSEPVRVIARYSGVSVGTVSNAL EECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KIFQKAGYLAETMDGHRLVNAELFLSAWARAYPTGLGADLELLRGKAQQLPPYNLEHLGV HHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHCCHHHCCCCCCHHHCCC KASESAVSDHISDGQSASLYLGEETFSPKVIKELRLVKNPAGTITLRRAFWNTIDVKEIP CCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEHHHCCCCCHHHHH EAIVYADLLNSDDARLWDVAQIIKAIILKRARGDWLGDQDG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTMRTGSQIFMRSGQWNELWKEKNVPLRFTNPNISFDGSERTKAEIEVVDSQEKSLVTR CCCCCCCHHEEECCCHHHHHHHCCCCEEECCCCCEECCCCCCEEEEEEECCCHHHHHHC NMQIIPWQHDIANLHLPERDSLILMPCATRTVGRRLTARNIGLADTRGNCDISWPGVMIK CCEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEECCCEEEE IYGQQAVTSARSHQKTAVLFSVRRAQVAAMILTYPWLLSEPVRVIARYSGVSVGTVSNAL EECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KIFQKAGYLAETMDGHRLVNAELFLSAWARAYPTGLGADLELLRGKAQQLPPYNLEHLGV HHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHCCHHHCCCCCCHHHCCC KASESAVSDHISDGQSASLYLGEETFSPKVIKELRLVKNPAGTITLRRAFWNTIDVKEIP CCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEHHHCCCCCHHHHH EAIVYADLLNSDDARLWDVAQIIKAIILKRARGDWLGDQDG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA