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The map label for this gene is yoaR [H]

Identifier: 38234714

GI number: 38234714

Start: 2244892

End: 2246574

Strand: Reverse

Name: yoaR [H]

Synonym: DIP2171

Alternate gene names: 38234714

Gene position: 2246574-2244892 (Counterclockwise)

Preceding gene: 38234715

Following gene: 38234713

Centisome position: 90.27

GC content: 54.72

Gene sequence:

>1683_bases
GTGTGCACTAAATTGGGTCAGGTGAGTTCTAAGAAAGTAGCCAAGTTTAGTGCGGGTGTGATCCTGGGGCTGGGAGTCCT
CGGCGGTATCGCATACGGCGCTGACTACGTGACGTCGCAAGGCGAAGTGCCTCGTGGCACAACTGTGGGAGGCATCGCAA
TCGGTGGAATGGCTAAAGAAGACGCCATTTCCACCCTGCAAAAGCAACTGAAATTGACCGACCAGGTCACCGTCACCGCT
GGCGAGCGCACAGCTACTTTCTCCCCAGAGGTTGCAGGGCTGAGCGTGGATTGGAACGAAACAATCCGTGCCGCCGGTAA
GCAATCCGCCAACCCCATTACTCGTCTGAGCAGTTTTTTTACCACCCACGAGGTAGAGATCGTCTCCGAGCGCGATGATT
CTAAGCTCATCCCTGAGTTAGAGCGCGTACAAAAAGAACTCAGCCCAGCACCCGCCGATGCCGCTATTCGTCTTACCGAC
GGAAAAGTGGAAGTCATCCCAGCTGTTAACGGCCAAGAGCTGGATAAAAAAGAACTAGATAAGGCTGTTGTTTCCTCGTG
GCTACACCCTGAGGGAGTAAGCGTTGACCCGAAGGTGACTAAGCCGCGCATCGGTGAATCCGCTGTGGAAGAGGCACGCC
CTGCTGCCGAAGCCGCCGTCAGCAGCCCCATCGTGGCACACGGCCGCGACAAAATCGACGGTGTCATTGAACCAACCCGC
ATGGGCGAGGTAGTGACCTTCGAACCTGATGGCAAGAAGTTCCGCGTTGCCGTGAACACCGATGCCGCACGCGCAATTTT
GAACGAGACACTCAACGTGACCGAGGTGCAGCGGAGAAACGCTGACATTCAATTCTCTGGTTCAGCAAAGACCGTGATCC
CGCACATGGACGGCGTGCGAATCGAATGGGACAAGACGCTGGAGCACTTTGATAAGCGTGTGACCGGCAAGGACAGCCGC
ACATTCGACGTCGCCTACACCGATGAGCCAGCCACCTTCACCACCGAGCAAGCAGAGGCTGCAACCTTCGATCAAGTTGT
CGGTGAATTTACTACCGGTGGCTACTCACAAGCATCGGGTATCAATATTGCACGCGTTGCTCAGATGGTCAACGGTGCTA
TTGTAGCCCCCGGAGATACCTTCTCACTCAATGGGTACACTGGCCCGCGTGGTATTGCCCAAGGATTTGTGGAATCCGGC
ATTATCCTCAATGGTCACGCTGATAAAGCCGTTGGCGGTGGCATTAGCCAGTTCGCTACTACTTTGTATAACGCTGCGTA
CTTCGCGGGCATGGAAGACGTAGCCCATACTCCACATAGCTATTACATCTCTCGTTACCCTGCTGGACGCGAAGCTACCG
TATTTGAAGGTGCTATCGACTTGCAGTTTAAAAACACCTCACCATACCCCGTCCGCATTGTCACCTCCGCCGGCGGCGGT
TCGGTAACAGTACAGCTCACTGGTGTGAAAACGGTGAATGTGGAATCGATCAACGGTGGTCGCTGGAACTACACACCACC
GCGTCCGATCACACTTTCTGGCCCAGATTGTGCCGCTTCTTCCGGTGCACAGGGCTTTACCACCAGCGATACTCGTATCA
TCCGTTCGCTTTCTGGCTCCGAGATCTCTCGTGAGACAAAAACCACCGTGTATGATCCTTCGCCTATCGTGACTTGTTCC
TAA

Upstream 100 bases:

>100_bases
TGGTCGAAGCCATTGATGCCACTGTGGCTGCAGTCTCGGAGGGGCGTTACCCCGTCGAACAGTTCAAGGCTTCAGTTGCG
CGAGTCGCAGGCTAAGGCGT

Downstream 100 bases:

>100_bases
TGCGGGGCGTAGGGTTAGGGGTCATGCCACATTCGACGTCGACACGCTTGGTCATCCCTAACCAACATGGCGCTTGGGCC
ATGCTTATTACCCCAGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MCTKLGQVSSKKVAKFSAGVILGLGVLGGIAYGADYVTSQGEVPRGTTVGGIAIGGMAKEDAISTLQKQLKLTDQVTVTA
GERTATFSPEVAGLSVDWNETIRAAGKQSANPITRLSSFFTTHEVEIVSERDDSKLIPELERVQKELSPAPADAAIRLTD
GKVEVIPAVNGQELDKKELDKAVVSSWLHPEGVSVDPKVTKPRIGESAVEEARPAAEAAVSSPIVAHGRDKIDGVIEPTR
MGEVVTFEPDGKKFRVAVNTDAARAILNETLNVTEVQRRNADIQFSGSAKTVIPHMDGVRIEWDKTLEHFDKRVTGKDSR
TFDVAYTDEPATFTTEQAEAATFDQVVGEFTTGGYSQASGINIARVAQMVNGAIVAPGDTFSLNGYTGPRGIAQGFVESG
IILNGHADKAVGGGISQFATTLYNAAYFAGMEDVAHTPHSYYISRYPAGREATVFEGAIDLQFKNTSPYPVRIVTSAGGG
SVTVQLTGVKTVNVESINGGRWNYTPPRPITLSGPDCAASSGAQGFTTSDTRIIRSLSGSEISRETKTTVYDPSPIVTCS

Sequences:

>Translated_560_residues
MCTKLGQVSSKKVAKFSAGVILGLGVLGGIAYGADYVTSQGEVPRGTTVGGIAIGGMAKEDAISTLQKQLKLTDQVTVTA
GERTATFSPEVAGLSVDWNETIRAAGKQSANPITRLSSFFTTHEVEIVSERDDSKLIPELERVQKELSPAPADAAIRLTD
GKVEVIPAVNGQELDKKELDKAVVSSWLHPEGVSVDPKVTKPRIGESAVEEARPAAEAAVSSPIVAHGRDKIDGVIEPTR
MGEVVTFEPDGKKFRVAVNTDAARAILNETLNVTEVQRRNADIQFSGSAKTVIPHMDGVRIEWDKTLEHFDKRVTGKDSR
TFDVAYTDEPATFTTEQAEAATFDQVVGEFTTGGYSQASGINIARVAQMVNGAIVAPGDTFSLNGYTGPRGIAQGFVESG
IILNGHADKAVGGGISQFATTLYNAAYFAGMEDVAHTPHSYYISRYPAGREATVFEGAIDLQFKNTSPYPVRIVTSAGGG
SVTVQLTGVKTVNVESINGGRWNYTPPRPITLSGPDCAASSGAQGFTTSDTRIIRSLSGSEISRETKTTVYDPSPIVTCS
>Mature_560_residues
MCTKLGQVSSKKVAKFSAGVILGLGVLGGIAYGADYVTSQGEVPRGTTVGGIAIGGMAKEDAISTLQKQLKLTDQVTVTA
GERTATFSPEVAGLSVDWNETIRAAGKQSANPITRLSSFFTTHEVEIVSERDDSKLIPELERVQKELSPAPADAAIRLTD
GKVEVIPAVNGQELDKKELDKAVVSSWLHPEGVSVDPKVTKPRIGESAVEEARPAAEAAVSSPIVAHGRDKIDGVIEPTR
MGEVVTFEPDGKKFRVAVNTDAARAILNETLNVTEVQRRNADIQFSGSAKTVIPHMDGVRIEWDKTLEHFDKRVTGKDSR
TFDVAYTDEPATFTTEQAEAATFDQVVGEFTTGGYSQASGINIARVAQMVNGAIVAPGDTFSLNGYTGPRGIAQGFVESG
IILNGHADKAVGGGISQFATTLYNAAYFAGMEDVAHTPHSYYISRYPAGREATVFEGAIDLQFKNTSPYPVRIVTSAGGG
SVTVQLTGVKTVNVESINGGRWNYTPPRPITLSGPDCAASSGAQGFTTSDTRIIRSLSGSEISRETKTTVYDPSPIVTCS

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 59365; Mature: 59365

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTKLGQVSSKKVAKFSAGVILGLGVLGGIAYGADYVTSQGEVPRGTTVGGIAIGGMAKE
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCEECCEEECCCCHH
DAISTLQKQLKLTDQVTVTAGERTATFSPEVAGLSVDWNETIRAAGKQSANPITRLSSFF
HHHHHHHHHHHCCCEEEEEECCCEEECCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHH
TTHEVEIVSERDDSKLIPELERVQKELSPAPADAAIRLTDGKVEVIPAVNGQELDKKELD
HHEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHH
KAVVSSWLHPEGVSVDPKVTKPRIGESAVEEARPAAEAAVSSPIVAHGRDKIDGVIEPTR
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCCEEECCCCCCCCCCCCCC
MGEVVTFEPDGKKFRVAVNTDAARAILNETLNVTEVQRRNADIQFSGSAKTVIPHMDGVR
CCCEEEECCCCCEEEEEECCHHHHHHHHCCCCHHHHHHCCCCEEECCCCCEEEECCCCEE
IEWDKTLEHFDKRVTGKDSRTFDVAYTDEPATFTTEQAEAATFDQVVGEFTTGGYSQASG
EEHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCC
INIARVAQMVNGAIVAPGDTFSLNGYTGPRGIAQGFVESGIILNGHADKAVGGGISQFAT
CHHHHHHHHHCCEEECCCCEEEECCCCCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHH
TLYNAAYFAGMEDVAHTPHSYYISRYPAGREATVFEGAIDLQFKNTSPYPVRIVTSAGGG
HHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCEEEECEEEEEECCCCCCCEEEEEECCCC
SVTVQLTGVKTVNVESINGGRWNYTPPRPITLSGPDCAASSGAQGFTTSDTRIIRSLSGS
EEEEEEECEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCC
EISRETKTTVYDPSPIVTCS
CCCCCCCCEEECCCCCEEEC
>Mature Secondary Structure
MCTKLGQVSSKKVAKFSAGVILGLGVLGGIAYGADYVTSQGEVPRGTTVGGIAIGGMAKE
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCEECCEEECCCCHH
DAISTLQKQLKLTDQVTVTAGERTATFSPEVAGLSVDWNETIRAAGKQSANPITRLSSFF
HHHHHHHHHHHCCCEEEEEECCCEEECCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHH
TTHEVEIVSERDDSKLIPELERVQKELSPAPADAAIRLTDGKVEVIPAVNGQELDKKELD
HHEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHH
KAVVSSWLHPEGVSVDPKVTKPRIGESAVEEARPAAEAAVSSPIVAHGRDKIDGVIEPTR
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCCEEECCCCCCCCCCCCCC
MGEVVTFEPDGKKFRVAVNTDAARAILNETLNVTEVQRRNADIQFSGSAKTVIPHMDGVR
CCCEEEECCCCCEEEEEECCHHHHHHHHCCCCHHHHHHCCCCEEECCCCCEEEECCCCEE
IEWDKTLEHFDKRVTGKDSRTFDVAYTDEPATFTTEQAEAATFDQVVGEFTTGGYSQASG
EEHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCC
INIARVAQMVNGAIVAPGDTFSLNGYTGPRGIAQGFVESGIILNGHADKAVGGGISQFAT
CHHHHHHHHHCCEEECCCCEEEECCCCCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHH
TLYNAAYFAGMEDVAHTPHSYYISRYPAGREATVFEGAIDLQFKNTSPYPVRIVTSAGGG
HHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCEEEECEEEEEECCCCCCCEEEEEECCCC
SVTVQLTGVKTVNVESINGGRWNYTPPRPITLSGPDCAASSGAQGFTTSDTRIIRSLSGS
EEEEEEECEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCC
EISRETKTTVYDPSPIVTCS
CCCCCCCCEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]