| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234539
Identifier: 38234539
GI number: 38234539
Start: 2022342
End: 2022944
Strand: Reverse
Name: 38234539
Synonym: DIP1975
Alternate gene names: NA
Gene position: 2022944-2022342 (Counterclockwise)
Preceding gene: 38234540
Following gene: 38234538
Centisome position: 81.29
GC content: 59.54
Gene sequence:
>603_bases GTGGCTGTGGTTAGCGTGCTCGCCACCGACCTGGCGGTCGTGCTGGCCGGATTCCAGAACTGGGGCGGCGATGGTGGCGT CGAGAGCAATGTCGCCGGAGTCGAAGGAGAAGACAACGTTCTTGCTGCCGCCAACTGCCAAGCCCTTGTTCTCAACCGAA GTGATCACGTGGGTGATGCAACCGGACTTTGGCTCGGTCAGTCGAGACATCTCGGCTTTGATGCCGCCGACGATGGAGCA GTCGCTAGCAAGCTTGGTGTCGCCGTCGATGGTCGCCTTGGTGCCGTCGACAGTAATGCTCTTCAAGACGTGCTCTTTGT TGCTGTTGTCTTGGTTGATGGCGGTGAACTTCACACCTGCCTGGCCCTGTTCGGTGAGGCTGATGGTCACGTCGCGCAGT GCGATGGTGCCGTTGGCGTTATCGACCTCCGAGCCGTCGACAGCCGCTACCTGATCGGAGGTTTGGGTGATCTGGCCAGC GCTGCACGATGCGAGAGCAAGCGCAGAAGCTGCTGCAACAGAGATCATTGCGCCACGGCGAGCGGCGGACTTCAGGGACT TCACGTGTACGTCCTCCATAAGGTGAGACTGTTAGTCGATTAA
Upstream 100 bases:
>100_bases ACCGTTGTCATAGTAGCTATAGAAAATCCGCCGCCACGCTGGAATTATTCCAAGCGTGACGACGGATTTATTGCTGCGAT AAGCGGTAATTAGAGGCTTA
Downstream 100 bases:
>100_bases GGGCTAAATTTTCTTTCCTTACTTTAGTAGGCTGCGGTGGAGTTCACACAGTTGCTGGTGTGATCGGGGAGCCAAAAGGG GGGAAACTTTAGGAGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MAVVSVLATDLAVVLAGFQNWGGDGGVESNVAGVEGEDNVLAAANCQALVLNRSDHVGDATGLWLGQSRHLGFDAADDGA VASKLGVAVDGRLGAVDSNALQDVLFVAVVLVDGGELHTCLALFGEADGHVAQCDGAVGVIDLRAVDSRYLIGGLGDLAS AARCESKRRSCCNRDHCATASGGLQGLHVYVLHKVRLLVD
Sequences:
>Translated_200_residues MAVVSVLATDLAVVLAGFQNWGGDGGVESNVAGVEGEDNVLAAANCQALVLNRSDHVGDATGLWLGQSRHLGFDAADDGA VASKLGVAVDGRLGAVDSNALQDVLFVAVVLVDGGELHTCLALFGEADGHVAQCDGAVGVIDLRAVDSRYLIGGLGDLAS AARCESKRRSCCNRDHCATASGGLQGLHVYVLHKVRLLVD >Mature_199_residues AVVSVLATDLAVVLAGFQNWGGDGGVESNVAGVEGEDNVLAAANCQALVLNRSDHVGDATGLWLGQSRHLGFDAADDGAV ASKLGVAVDGRLGAVDSNALQDVLFVAVVLVDGGELHTCLALFGEADGHVAQCDGAVGVIDLRAVDSRYLIGGLGDLASA ARCESKRRSCCNRDHCATASGGLQGLHVYVLHKVRLLVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20431; Mature: 20300
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVSVLATDLAVVLAGFQNWGGDGGVESNVAGVEGEDNVLAAANCQALVLNRSDHVGDA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCC TGLWLGQSRHLGFDAADDGAVASKLGVAVDGRLGAVDSNALQDVLFVAVVLVDGGELHTC CEEEECCCCCCCCCCCCCCCHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH LALFGEADGHVAQCDGAVGVIDLRAVDSRYLIGGLGDLASAARCESKRRSCCNRDHCATA HHHHCCCCCCEEECCCCEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCC SGGLQGLHVYVLHKVRLLVD CCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AVVSVLATDLAVVLAGFQNWGGDGGVESNVAGVEGEDNVLAAANCQALVLNRSDHVGDA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCC TGLWLGQSRHLGFDAADDGAVASKLGVAVDGRLGAVDSNALQDVLFVAVVLVDGGELHTC CEEEECCCCCCCCCCCCCCCHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH LALFGEADGHVAQCDGAVGVIDLRAVDSRYLIGGLGDLASAARCESKRRSCCNRDHCATA HHHHCCCCCCEEECCCCEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCC SGGLQGLHVYVLHKVRLLVD CCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA