| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234405
Identifier: 38234405
GI number: 38234405
Start: 1876508
End: 1878073
Strand: Direct
Name: 38234405
Synonym: DIP1834
Alternate gene names: NA
Gene position: 1876508-1878073 (Clockwise)
Preceding gene: 38234404
Following gene: 38234406
Centisome position: 75.4
GC content: 53.83
Gene sequence:
>1566_bases ATGGCGGGTAAATCTGCTATTCTGTCCGTCCGCATTATCGCGGACGCGACAAAGGCTAAAGCCGGACTGGATAGCGCCGC TAAGTCCGTGGGAGATTTTGAAAAATCAACCGGAAATAAGCTGGCCGCCGCCAAAGGCCACATTGACAAAATAGCGGGGG CGGCCACTGTAGCCGGTGGAGCGTATGCCGCTTTTGCTAAAAAAACATTAGGCGCAGCTAGCGAAATGCAGCAATCCAGC GGCGCGGTTGAAGCTGTATTTAAAAAGGAAGCTGACGCAGTAAAGCACCTTGCCGCTAATGCCGCTCAATCCGTGGGCCT ATCCGCTAGCCAATACCAGCAAATGGCCGCCGTTATGGGGAGTCAATTGGGCAATTTGGGCATTGCCCAAAAAGACGTTA TTGGCACAACGGATAAGCTGATTACCCTTGGCGCTGATCTCGCTAGTATGTTCGGCGGCACCACCTCGGAAGCGGTGGAA GCGCTCAGCTCGCTTTTGCGTGGAGAGCGTGACCCTATCGAACGTTATGCCGTCTCGATTAATCAAGCTGCCATTGACGC GCATTTAGCGTCTAAGGGGCTCGGCAAGCTGGAGGGCGAAGCTAAAAAGCAGGCTGAGACTCAAGCAACCCTAGAGCTGC TTTTTAAGCAAACCGCGGACGCTACGGGCAACTTTGCCAGGGAGACAGATACCGCCGCCGGTAGTGCCCAAATTGCCGCC GCTAAATGGGAGGACGCTAAAGCCAAGCTGGGCGAGGGCCTTTTGCCAGTGGCGACCGCCGCCGCGGACGTTATGGGCGA CCTCGCCCAATCCGCGGGTGAGCACCCCCGGTTGTTCACCGCGGCCGGTCTGGCCATTGCTGCGTTTGTTGGCACAGCCT GGACGATCTCGACCGCGATTAAAGCGGCGACGGGCGCGCAAGTCCTTTTCAATCTCGCATTGAATGCTAACCCCATTGGC CTTGTCGTTACCTTGCTAACCGCCGCTGGCACTGCATTTTATTTGCTTTATCAAAAGTGCGATAGGTTCCGCATTGCCGT GCAAATCAGCATCCAGGTTGCTAAGAATTTTGGCACCGCCATTAAAACAGCTATCGAAAATGCTATGAAATGGGTTGATA AATTAATTGGCAAGTGGATTAGCTTTAAGAATGAGCATAAAACTATATCCAATAGTGTCACCGCCGCAATTAAAGCGTGG TTTAACCCAATTGGCACAATGATTAACCTTGTCAAAAAGCTCATTGGCTGGATTAGTGAGATTGATTGGCCGCAACCCCC GGCATTTTTGCGCGGTGGTGGGCGTAGCGTTAAGCGACTGTATGCGGCGGCCCCCGCGCCTGCTTTGCTCGGAACACCCG CGGCTAGTGCAATCCTCACCGCCGCCGCCGTTCCCGCGCTCACCGCAGCATATGCCCCACCAGACGCAGGCTATTTATCA CACCGCAATACAACAAGTCAAGGCACAACGGTAAATATCACAGTTAATGGCGCTATTGACCCCGATAGCACCGCCCGGCA AATCAAAAAGCTATTGGAGCAATACGATAGGCGGCAAGCATGGTAA
Upstream 100 bases:
>100_bases CTGAACCTCGCCATCGCACTTAGAGTCGCGCCGCGCGAAATTTATGCGCTTTCACATGAGGAAATAGCAACGCTGGAAGA AATACTAATGGAGTCTAATA
Downstream 100 bases:
>100_bases ACAAAAGCCCCATAGCGCAGTCCACAATTGTCACCATTGACCGCGACAGCCTGAAATTCCGCCCCGGTTCCATTCTGTCC GGTCTAACGATCACATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MAGKSAILSVRIIADATKAKAGLDSAAKSVGDFEKSTGNKLAAAKGHIDKIAGAATVAGGAYAAFAKKTLGAASEMQQSS GAVEAVFKKEADAVKHLAANAAQSVGLSASQYQQMAAVMGSQLGNLGIAQKDVIGTTDKLITLGADLASMFGGTTSEAVE ALSSLLRGERDPIERYAVSINQAAIDAHLASKGLGKLEGEAKKQAETQATLELLFKQTADATGNFARETDTAAGSAQIAA AKWEDAKAKLGEGLLPVATAAADVMGDLAQSAGEHPRLFTAAGLAIAAFVGTAWTISTAIKAATGAQVLFNLALNANPIG LVVTLLTAAGTAFYLLYQKCDRFRIAVQISIQVAKNFGTAIKTAIENAMKWVDKLIGKWISFKNEHKTISNSVTAAIKAW FNPIGTMINLVKKLIGWISEIDWPQPPAFLRGGGRSVKRLYAAAPAPALLGTPAASAILTAAAVPALTAAYAPPDAGYLS HRNTTSQGTTVNITVNGAIDPDSTARQIKKLLEQYDRRQAW
Sequences:
>Translated_521_residues MAGKSAILSVRIIADATKAKAGLDSAAKSVGDFEKSTGNKLAAAKGHIDKIAGAATVAGGAYAAFAKKTLGAASEMQQSS GAVEAVFKKEADAVKHLAANAAQSVGLSASQYQQMAAVMGSQLGNLGIAQKDVIGTTDKLITLGADLASMFGGTTSEAVE ALSSLLRGERDPIERYAVSINQAAIDAHLASKGLGKLEGEAKKQAETQATLELLFKQTADATGNFARETDTAAGSAQIAA AKWEDAKAKLGEGLLPVATAAADVMGDLAQSAGEHPRLFTAAGLAIAAFVGTAWTISTAIKAATGAQVLFNLALNANPIG LVVTLLTAAGTAFYLLYQKCDRFRIAVQISIQVAKNFGTAIKTAIENAMKWVDKLIGKWISFKNEHKTISNSVTAAIKAW FNPIGTMINLVKKLIGWISEIDWPQPPAFLRGGGRSVKRLYAAAPAPALLGTPAASAILTAAAVPALTAAYAPPDAGYLS HRNTTSQGTTVNITVNGAIDPDSTARQIKKLLEQYDRRQAW >Mature_520_residues AGKSAILSVRIIADATKAKAGLDSAAKSVGDFEKSTGNKLAAAKGHIDKIAGAATVAGGAYAAFAKKTLGAASEMQQSSG AVEAVFKKEADAVKHLAANAAQSVGLSASQYQQMAAVMGSQLGNLGIAQKDVIGTTDKLITLGADLASMFGGTTSEAVEA LSSLLRGERDPIERYAVSINQAAIDAHLASKGLGKLEGEAKKQAETQATLELLFKQTADATGNFARETDTAAGSAQIAAA KWEDAKAKLGEGLLPVATAAADVMGDLAQSAGEHPRLFTAAGLAIAAFVGTAWTISTAIKAATGAQVLFNLALNANPIGL VVTLLTAAGTAFYLLYQKCDRFRIAVQISIQVAKNFGTAIKTAIENAMKWVDKLIGKWISFKNEHKTISNSVTAAIKAWF NPIGTMINLVKKLIGWISEIDWPQPPAFLRGGGRSVKRLYAAAPAPALLGTPAASAILTAAAVPALTAAYAPPDAGYLSH RNTTSQGTTVNITVNGAIDPDSTARQIKKLLEQYDRRQAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53976; Mature: 53845
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKSAILSVRIIADATKAKAGLDSAAKSVGDFEKSTGNKLAAAKGHIDKIAGAATVAGG CCCCCCEEEEEEEECHHHHHHCHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHCCC AYAAFAKKTLGAASEMQQSSGAVEAVFKKEADAVKHLAANAAQSVGLSASQYQQMAAVMG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SQLGNLGIAQKDVIGTTDKLITLGADLASMFGGTTSEAVEALSSLLRGERDPIERYAVSI HHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH NQAAIDAHLASKGLGKLEGEAKKQAETQATLELLFKQTADATGNFARETDTAAGSAQIAA HHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEH AKWEDAKAKLGEGLLPVATAAADVMGDLAQSAGEHPRLFTAAGLAIAAFVGTAWTISTAI HCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KAATGAQVLFNLALNANPIGLVVTLLTAAGTAFYLLYQKCDRFRIAVQISIQVAKNFGTA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHH IKTAIENAMKWVDKLIGKWISFKNEHKTISNSVTAAIKAWFNPIGTMINLVKKLIGWISE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDWPQPPAFLRGGGRSVKRLYAAAPAPALLGTPAASAILTAAAVPALTAAYAPPDAGYLS CCCCCCCHHHCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC HRNTTSQGTTVNITVNGAIDPDSTARQIKKLLEQYDRRQAW CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGKSAILSVRIIADATKAKAGLDSAAKSVGDFEKSTGNKLAAAKGHIDKIAGAATVAGG CCCCCEEEEEEEECHHHHHHCHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHCCC AYAAFAKKTLGAASEMQQSSGAVEAVFKKEADAVKHLAANAAQSVGLSASQYQQMAAVMG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SQLGNLGIAQKDVIGTTDKLITLGADLASMFGGTTSEAVEALSSLLRGERDPIERYAVSI HHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH NQAAIDAHLASKGLGKLEGEAKKQAETQATLELLFKQTADATGNFARETDTAAGSAQIAA HHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEH AKWEDAKAKLGEGLLPVATAAADVMGDLAQSAGEHPRLFTAAGLAIAAFVGTAWTISTAI HCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KAATGAQVLFNLALNANPIGLVVTLLTAAGTAFYLLYQKCDRFRIAVQISIQVAKNFGTA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHH IKTAIENAMKWVDKLIGKWISFKNEHKTISNSVTAAIKAWFNPIGTMINLVKKLIGWISE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDWPQPPAFLRGGGRSVKRLYAAAPAPALLGTPAASAILTAAAVPALTAAYAPPDAGYLS CCCCCCCHHHCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC HRNTTSQGTTVNITVNGAIDPDSTARQIKKLLEQYDRRQAW CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA