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The map label for this gene is 38234343

Identifier: 38234343

GI number: 38234343

Start: 1816728

End: 1817549

Strand: Reverse

Name: 38234343

Synonym: DIP1772

Alternate gene names: NA

Gene position: 1817549-1816728 (Counterclockwise)

Preceding gene: 38234344

Following gene: 38234342

Centisome position: 73.03

GC content: 56.08

Gene sequence:

>822_bases
ATGGCTGTTCGCATTGTCACGGATTCCTCGTCGGGATTGCCCGCGGAGATAGCAGAGGAACTGGGGATCACGGTGGTGGA
TTTACACCTTGTGGCCTCAGAAAACCAAGTCAGTACAGCGGGGTTGTCTGCGTTAGAGCTCACCGCTGCCTATGCGCGCC
AGCTTGAGCGTGGTGGCGACGCCGGCGTGGTGGCCTTGCATCTTTCCAAGGAGTTATCGTCTACGTGGTCTGCTGCACAT
ACTGCGGCCGCCGTATTCGATGGAACGGTTGACGTAGTAGACACCCAGTCTGTGGGAATGTGTGTAGGTGCTGCAGCAAT
GGCTGCAGCACGGTTGGCTCAAGGCGGGGCAAGTTTGCGGGAGTGCGCAGACATGGCTCGCGATACGTTACGACGCTCTG
AAACATGGTTGTATCTGCATCGTATGGAAGAGATGCGTCGTTCTGGCCGGATCACCACGGCAACAGCTGTGGTGTCTGCA
GCACTAGCCACCAAGCCGATTATGCAGCTGCGCGGGGGCCATGTAGAACTAGCAGTGAAAACTCGCACGCAGTCCAAAGC
TTTCGCTCGGTTGGTTGCTGTCATCTCTGATCGCTGCGCTGGCGAGCCTGCCTTCGTGGCGATCCAACATCATCAGGCGT
TAGAAGCTGCACATTCACTGCAGTCTCAGTTGACTGCGGCGCTGCCCAAGGGCTCTAGCTTCATGATTATGGACATGGAC
CAAGCCTTAAGCGTTCATTGTGGTGTAGGGGCACTGGGAATCTCGGTGGTTTTTAGCAGCTATTCCGATACTGCTCCCAT
CGATTTGTCAACCACCTCCTAA

Upstream 100 bases:

>100_bases
CAGCTCTCTGCGCGTTTTACCCCGCAAACGGTGACTGATGCGCAGTGGTACCTCGAAGGCTGGAACATGGGCGTGGCGTT
AGGGAGCAACCTTTAGCGCT

Downstream 100 bases:

>100_bases
AAGTTATCCACAGATGCCCCGCGCAGCGGGTGCCCCCGACGCAGTTATCCACAGGTTTATCATGACTGCGTCCCGAGCAA
CGTGAGGTCGTATCTCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAVRIVTDSSSGLPAEIAEELGITVVDLHLVASENQVSTAGLSALELTAAYARQLERGGDAGVVALHLSKELSSTWSAAH
TAAAVFDGTVDVVDTQSVGMCVGAAAMAAARLAQGGASLRECADMARDTLRRSETWLYLHRMEEMRRSGRITTATAVVSA
ALATKPIMQLRGGHVELAVKTRTQSKAFARLVAVISDRCAGEPAFVAIQHHQALEAAHSLQSQLTAALPKGSSFMIMDMD
QALSVHCGVGALGISVVFSSYSDTAPIDLSTTS

Sequences:

>Translated_273_residues
MAVRIVTDSSSGLPAEIAEELGITVVDLHLVASENQVSTAGLSALELTAAYARQLERGGDAGVVALHLSKELSSTWSAAH
TAAAVFDGTVDVVDTQSVGMCVGAAAMAAARLAQGGASLRECADMARDTLRRSETWLYLHRMEEMRRSGRITTATAVVSA
ALATKPIMQLRGGHVELAVKTRTQSKAFARLVAVISDRCAGEPAFVAIQHHQALEAAHSLQSQLTAALPKGSSFMIMDMD
QALSVHCGVGALGISVVFSSYSDTAPIDLSTTS
>Mature_272_residues
AVRIVTDSSSGLPAEIAEELGITVVDLHLVASENQVSTAGLSALELTAAYARQLERGGDAGVVALHLSKELSSTWSAAHT
AAAVFDGTVDVVDTQSVGMCVGAAAMAAARLAQGGASLRECADMARDTLRRSETWLYLHRMEEMRRSGRITTATAVVSAA
LATKPIMQLRGGHVELAVKTRTQSKAFARLVAVISDRCAGEPAFVAIQHHQALEAAHSLQSQLTAALPKGSSFMIMDMDQ
ALSVHCGVGALGISVVFSSYSDTAPIDLSTTS

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 28507; Mature: 28376

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRIVTDSSSGLPAEIAEELGITVVDLHLVASENQVSTAGLSALELTAAYARQLERGGD
CEEEEEECCCCCCCHHHHHHCCCEEEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHCCCC
AGVVALHLSKELSSTWSAAHTAAAVFDGTVDVVDTQSVGMCVGAAAMAAARLAQGGASLR
CCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHH
ECADMARDTLRRSETWLYLHRMEEMRRSGRITTATAVVSAALATKPIMQLRGGHVELAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
TRTQSKAFARLVAVISDRCAGEPAFVAIQHHQALEAAHSLQSQLTAALPKGSSFMIMDMD
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHH
QALSVHCGVGALGISVVFSSYSDTAPIDLSTTS
HHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCC
>Mature Secondary Structure 
AVRIVTDSSSGLPAEIAEELGITVVDLHLVASENQVSTAGLSALELTAAYARQLERGGD
EEEEEECCCCCCCHHHHHHCCCEEEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHCCCC
AGVVALHLSKELSSTWSAAHTAAAVFDGTVDVVDTQSVGMCVGAAAMAAARLAQGGASLR
CCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHH
ECADMARDTLRRSETWLYLHRMEEMRRSGRITTATAVVSAALATKPIMQLRGGHVELAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
TRTQSKAFARLVAVISDRCAGEPAFVAIQHHQALEAAHSLQSQLTAALPKGSSFMIMDMD
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHH
QALSVHCGVGALGISVVFSSYSDTAPIDLSTTS
HHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]