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The map label for this gene is 38234340

Identifier: 38234340

GI number: 38234340

Start: 1813394

End: 1814368

Strand: Reverse

Name: 38234340

Synonym: DIP1769

Alternate gene names: NA

Gene position: 1814368-1813394 (Counterclockwise)

Preceding gene: 38234341

Following gene: 38234339

Centisome position: 72.91

GC content: 58.56

Gene sequence:

>975_bases
ATGGGTCAGCAACTTCTACCAGTGCACCTCGTAGTTGGCGACGATGAATTCCTAGCCGAACGCGCACGACACAGCATCAT
CGCAGCCATCAACAAAACCATTGGCAGCGACGTCCCCGTGACCACCCTTCGGGCAGGCGAAGTCAACGCCTCCGAACTCA
TCCAACTCACCAGCCCGTCGCTCTTCGGCGAAGACCGCATCATTGTGCTGACCAACATGGAAGATGCTGGCAAAGAACCC
GCGGAACTCGTCCTCAACGTTGCCGTCGACCCAGCACCAGGAATCTACCTCATCATCGTGCACTCCGGCGGCGGACGGCA
AAAAGCACTAGTACCAAAACTCAGCAAAATCAGCCAAGTCCACGAAGCCAACAAACTCAAACCTAAAGACCGCGTGGGCT
GGGTCACCAACGAATTCAAACGCCACGGAGTACGCCCCACCCCAGACGTGGTCCACGCCCTGCTCGAAGGCGTAGGATCC
GACCTCCGCGAACTCGCCTCCGCCATCGGCCAGCTTGTTGCTGACAACAATGGCGACGTCACCCTCGCCACCGTCCGCGA
CTACTACGTGGGAGTAGCAGAAGTCTCCGGTTTCGACGTGGCAGATCTTGCCTGCTCAGGACAAACCCAACGTGCCGTCG
CCAGCGCGCGCCGGGCACTGCAACTAGGAGTCTCACCGGTGGCACTTGCCGCCGCATTGAGCATGAAAGTTAGCGCTATC
GCGCGGTTGTATTCCACACGAGGGCGTATTGACTCCCGTAAACTCGCAGGAGAGCTGGGCATGCACCCCTTCGTTGTTGA
AAAAACCGCCAAAGTTGCGCGCATGTGGACGGGTAATGCTGTGAGCCAAGCGGTGATCTTGATGGCGGATGTGGATTCCA
GTCTTAAGGGCCACGGCCTCGATGGCGAACTCGGCGGTGACCCCGACTACGAAATCGAGGATGCTATCCGCAGGATCTCT
GAGCTCGCAGGCTAA

Upstream 100 bases:

>100_bases
CGCCGCACCCGCGAGACAATGACCACCGATGGCACACCCGTCTACTATGCAACCGTGCCGGATCGAATCAGTATCGACCG
CATATGGCACGATAGACACC

Downstream 100 bases:

>100_bases
TCTAGAAGGCGTGAATCAATCCGAAATTCCACAAGACGTGCAAGAACTCGTATCCCAGTTGTTTGACATGGCACGTCGTG
GCGATACAGAAACCCTCGCC

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III; DNA Polymerase III Delta; DNA-Directed DNA Polymerase III Subunit Delta; DNA Polymerase III Delta Subunit HolA; DNA Polymerase III Subunit Delta-Like Protein; LOW QUALITY PROTEIN DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MGQQLLPVHLVVGDDEFLAERARHSIIAAINKTIGSDVPVTTLRAGEVNASELIQLTSPSLFGEDRIIVLTNMEDAGKEP
AELVLNVAVDPAPGIYLIIVHSGGGRQKALVPKLSKISQVHEANKLKPKDRVGWVTNEFKRHGVRPTPDVVHALLEGVGS
DLRELASAIGQLVADNNGDVTLATVRDYYVGVAEVSGFDVADLACSGQTQRAVASARRALQLGVSPVALAAALSMKVSAI
ARLYSTRGRIDSRKLAGELGMHPFVVEKTAKVARMWTGNAVSQAVILMADVDSSLKGHGLDGELGGDPDYEIEDAIRRIS
ELAG

Sequences:

>Translated_324_residues
MGQQLLPVHLVVGDDEFLAERARHSIIAAINKTIGSDVPVTTLRAGEVNASELIQLTSPSLFGEDRIIVLTNMEDAGKEP
AELVLNVAVDPAPGIYLIIVHSGGGRQKALVPKLSKISQVHEANKLKPKDRVGWVTNEFKRHGVRPTPDVVHALLEGVGS
DLRELASAIGQLVADNNGDVTLATVRDYYVGVAEVSGFDVADLACSGQTQRAVASARRALQLGVSPVALAAALSMKVSAI
ARLYSTRGRIDSRKLAGELGMHPFVVEKTAKVARMWTGNAVSQAVILMADVDSSLKGHGLDGELGGDPDYEIEDAIRRIS
ELAG
>Mature_323_residues
GQQLLPVHLVVGDDEFLAERARHSIIAAINKTIGSDVPVTTLRAGEVNASELIQLTSPSLFGEDRIIVLTNMEDAGKEPA
ELVLNVAVDPAPGIYLIIVHSGGGRQKALVPKLSKISQVHEANKLKPKDRVGWVTNEFKRHGVRPTPDVVHALLEGVGSD
LRELASAIGQLVADNNGDVTLATVRDYYVGVAEVSGFDVADLACSGQTQRAVASARRALQLGVSPVALAAALSMKVSAIA
RLYSTRGRIDSRKLAGELGMHPFVVEKTAKVARMWTGNAVSQAVILMADVDSSLKGHGLDGELGGDPDYEIEDAIRRISE
LAG

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 34385; Mature: 34254

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQQLLPVHLVVGDDEFLAERARHSIIAAINKTIGSDVPVTTLRAGEVNASELIQLTSPS
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHEECCCC
LFGEDRIIVLTNMEDAGKEPAELVLNVAVDPAPGIYLIIVHSGGGRQKALVPKLSKISQV
CCCCCCEEEEECCHHHCCCHHHEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
HEANKLKPKDRVGWVTNEFKRHGVRPTPDVVHALLEGVGSDLRELASAIGQLVADNNGDV
HHHHCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCE
TLATVRDYYVGVAEVSGFDVADLACSGQTQRAVASARRALQLGVSPVALAAALSMKVSAI
EEEEEHHHHEEHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ARLYSTRGRIDSRKLAGELGMHPFVVEKTAKVARMWTGNAVSQAVILMADVDSSLKGHGL
HHHHHHCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCC
DGELGGDPDYEIEDAIRRISELAG
CCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GQQLLPVHLVVGDDEFLAERARHSIIAAINKTIGSDVPVTTLRAGEVNASELIQLTSPS
CCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHEECCCC
LFGEDRIIVLTNMEDAGKEPAELVLNVAVDPAPGIYLIIVHSGGGRQKALVPKLSKISQV
CCCCCCEEEEECCHHHCCCHHHEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
HEANKLKPKDRVGWVTNEFKRHGVRPTPDVVHALLEGVGSDLRELASAIGQLVADNNGDV
HHHHCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCE
TLATVRDYYVGVAEVSGFDVADLACSGQTQRAVASARRALQLGVSPVALAAALSMKVSAI
EEEEEHHHHEEHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ARLYSTRGRIDSRKLAGELGMHPFVVEKTAKVARMWTGNAVSQAVILMADVDSSLKGHGL
HHHHHHCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCC
DGELGGDPDYEIEDAIRRISELAG
CCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA