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The map label for this gene is 38234233

Identifier: 38234233

GI number: 38234233

Start: 1696679

End: 1696888

Strand: Reverse

Name: 38234233

Synonym: DIP1660

Alternate gene names: NA

Gene position: 1696888-1696679 (Counterclockwise)

Preceding gene: 38234234

Following gene: 38234232

Centisome position: 68.19

GC content: 48.57

Gene sequence:

>210_bases
ATGAGTGATTTTGAGAACAAGATCGAAGAATTGGGCGGCAAAGCAAAAGAGGCAGTAGGAGAGGCTACTGAGAACGAGCA
GCTTGCCGACGAAGGTCGCGCCGATCAAACTAAAGCCGATGTTAAGCAGGCTGTTAGCGATGCCGGCGATAAGATCAAGG
GCGCTGCAGATAAGGTCCTTGGATCTTTCCAAAAAGATGAAGAGAACTAA

Upstream 100 bases:

>100_bases
GGGTTGATAACAATGTGTGTACATGGTGGCGGGCATCTTTAAGGCGACCTACGGTGGGAATTAGTATTAATCCCACTACG
CCTTAAGGAGGCACGTCACC

Downstream 100 bases:

>100_bases
TGCTTAACGCTTGAGTAAGAATAAAACCGAGACATTCCTTTGAGGGAGGGAATGTCTCGGTTTTGCTTTGTGGATTTATT
CAAAATCAAGAGTGTAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MSDFENKIEELGGKAKEAVGEATENEQLADEGRADQTKADVKQAVSDAGDKIKGAADKVLGSFQKDEEN

Sequences:

>Translated_69_residues
MSDFENKIEELGGKAKEAVGEATENEQLADEGRADQTKADVKQAVSDAGDKIKGAADKVLGSFQKDEEN
>Mature_68_residues
SDFENKIEELGGKAKEAVGEATENEQLADEGRADQTKADVKQAVSDAGDKIKGAADKVLGSFQKDEEN

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1660_CORDI (Q6NG70)

Other databases:

- EMBL:   BX248358
- RefSeq:   NP_940000.1
- ProteinModelPortal:   Q6NG70
- GeneID:   2648705
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1660
- NMPDR:   fig|257309.1.peg.1591
- HOGENOM:   HBG704474
- OMA:   EGFGEAT
- ProtClustDB:   CLSK632748
- BioCyc:   CDIP257309:DIP1660-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 7356; Mature: 7225

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFENKIEELGGKAKEAVGEATENEQLADEGRADQTKADVKQAVSDAGDKIKGAADKVL
CCHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
GSFQKDEEN
HHHHCCCCC
>Mature Secondary Structure 
SDFENKIEELGGKAKEAVGEATENEQLADEGRADQTKADVKQAVSDAGDKIKGAADKVL
CHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
GSFQKDEEN
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910