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The map label for this gene is ydhO [C]

Identifier: 38234196

GI number: 38234196

Start: 1654437

End: 1655450

Strand: Reverse

Name: ydhO [C]

Synonym: DIP1621

Alternate gene names: 38234196

Gene position: 1655450-1654437 (Counterclockwise)

Preceding gene: 38234197

Following gene: 38234195

Centisome position: 66.52

GC content: 51.97

Gene sequence:

>1014_bases
ATGCTTTCAACTTTTGTGTCGGCTTCCTTGTTGTTGGGTGGCGTAGCAGAGATAGCTGCACCACAGGGGATTGCTCAAGC
GGATCCTGTGGATGAACTCATTGCATCGATGACGGATACTTCTCGGCGTGCTAATGAGAAAAACGAAGAAGTTAAGCAGT
TAGAAGTTGGCTTGGAATACGGCCAGGCCAAGCTAGGGGAGCTTAATCAGTGGGCGGCTGACCTGACTGCTCAGGCAGAG
CAAGCGGCCGCTACTGAACGTGAATCGCGACAGGTAGTTAATCGCTTGGCTTTATCACGTTATCGGGGCGCGCTCACGGA
TCCGCTTACGAGTGCATTTGCTGCGCGAAATCCCCAGAATGCGATTGATCGTACGGCGTATTTGGCTACGTTGTCTCAGA
AGGCGAATGATACGGTGGCTCGCTTGGGGGCAGTTACTAAGGATGCGGCTGATCGTCGTAATGAGGCCACAATGGCTATT
GCGGAGTCTAAGTTCAAACAATCTGAGTTGGAAAAGAAGCATCGTGAGTTGCTGCAAGAACAAGAGGAACTCAAGCGAAT
CTCTGAGGATCTTCGTCGCCGTGTGGAATCATTGAACGCTGCGGATCGTCAGCGGTGGATTGATAAAAATGGTCCAGTTG
CTTACAACTTGGATGGTGTGGCGGGCTCGCCTTCGGGGATGAGCGCGCTTGAAGCGGCTATGTCGAAGTTGGGTTCGCCC
TATGGGTGGGGTTCTGCTGGGCCATCGCAGTTCGATTGCTCGGGGCTAGTGTATTGGTCTTATCAGCAGCAGGGAAAGAC
TCTTCCTCGAACTTCGCAGGCTCAAATGGCTGGTGGTACGCCAGTGTCGATTAATGATCTTCAGCCTGGGGATGTTGTTG
GATATTTCCCCGGTGCTACGCACGTGGGTATCTATGCTGGTAATGGCATGTTAGTTCATGCTTCGGATTATGGAATTCCA
GTGCAAGTTGTGCCGGTTAACTCTATGCCGATTTATGGGGCGCGTCGTTACTAG

Upstream 100 bases:

>100_bases
AGCCACATCGATGATGGCATGTCTATAGTGGGATAATCGCTTAAGACTGTGTAGATATCGGGGACCGTTCGTGGCTTTTT
CAAAAATGACCCATAGGGTC

Downstream 100 bases:

>100_bases
CTGTTTGCTACAGTGTTGGCGTGCCAAGGCTGTTATTAGTAACCAACGATTTTCCTCCGACTGTGGGAGGTATTCAGTCC
TATTTGCGGGATTTTGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLSTFVSASLLLGGVAEIAAPQGIAQADPVDELIASMTDTSRRANEKNEEVKQLEVGLEYGQAKLGELNQWAADLTAQAE
QAAATERESRQVVNRLALSRYRGALTDPLTSAFAARNPQNAIDRTAYLATLSQKANDTVARLGAVTKDAADRRNEATMAI
AESKFKQSELEKKHRELLQEQEELKRISEDLRRRVESLNAADRQRWIDKNGPVAYNLDGVAGSPSGMSALEAAMSKLGSP
YGWGSAGPSQFDCSGLVYWSYQQQGKTLPRTSQAQMAGGTPVSINDLQPGDVVGYFPGATHVGIYAGNGMLVHASDYGIP
VQVVPVNSMPIYGARRY

Sequences:

>Translated_337_residues
MLSTFVSASLLLGGVAEIAAPQGIAQADPVDELIASMTDTSRRANEKNEEVKQLEVGLEYGQAKLGELNQWAADLTAQAE
QAAATERESRQVVNRLALSRYRGALTDPLTSAFAARNPQNAIDRTAYLATLSQKANDTVARLGAVTKDAADRRNEATMAI
AESKFKQSELEKKHRELLQEQEELKRISEDLRRRVESLNAADRQRWIDKNGPVAYNLDGVAGSPSGMSALEAAMSKLGSP
YGWGSAGPSQFDCSGLVYWSYQQQGKTLPRTSQAQMAGGTPVSINDLQPGDVVGYFPGATHVGIYAGNGMLVHASDYGIP
VQVVPVNSMPIYGARRY
>Mature_337_residues
MLSTFVSASLLLGGVAEIAAPQGIAQADPVDELIASMTDTSRRANEKNEEVKQLEVGLEYGQAKLGELNQWAADLTAQAE
QAAATERESRQVVNRLALSRYRGALTDPLTSAFAARNPQNAIDRTAYLATLSQKANDTVARLGAVTKDAADRRNEATMAI
AESKFKQSELEKKHRELLQEQEELKRISEDLRRRVESLNAADRQRWIDKNGPVAYNLDGVAGSPSGMSALEAAMSKLGSP
YGWGSAGPSQFDCSGLVYWSYQQQGKTLPRTSQAQMAGGTPVSINDLQPGDVVGYFPGATHVGIYAGNGMLVHASDYGIP
VQVVPVNSMPIYGARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=107, Percent_Identity=33.6448598130841, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 36363; Mature: 36363

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTFVSASLLLGGVAEIAAPQGIAQADPVDELIASMTDTSRRANEKNEEVKQLEVGLEY
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GQAKLGELNQWAADLTAQAEQAAATERESRQVVNRLALSRYRGALTDPLTSAFAARNPQN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
AIDRTAYLATLSQKANDTVARLGAVTKDAADRRNEATMAIAESKFKQSELEKKHRELLQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QEELKRISEDLRRRVESLNAADRQRWIDKNGPVAYNLDGVAGSPSGMSALEAAMSKLGSP
HHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCC
YGWGSAGPSQFDCSGLVYWSYQQQGKTLPRTSQAQMAGGTPVSINDLQPGDVVGYFPGAT
CCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEECCCCC
HVGIYAGNGMLVHASDYGIPVQVVPVNSMPIYGARRY
EEEEEECCEEEEEECCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLSTFVSASLLLGGVAEIAAPQGIAQADPVDELIASMTDTSRRANEKNEEVKQLEVGLEY
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GQAKLGELNQWAADLTAQAEQAAATERESRQVVNRLALSRYRGALTDPLTSAFAARNPQN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
AIDRTAYLATLSQKANDTVARLGAVTKDAADRRNEATMAIAESKFKQSELEKKHRELLQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QEELKRISEDLRRRVESLNAADRQRWIDKNGPVAYNLDGVAGSPSGMSALEAAMSKLGSP
HHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCC
YGWGSAGPSQFDCSGLVYWSYQQQGKTLPRTSQAQMAGGTPVSINDLQPGDVVGYFPGAT
CCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEECCCCC
HVGIYAGNGMLVHASDYGIPVQVVPVNSMPIYGARRY
EEEEEECCEEEEEECCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]