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The map label for this gene is scpA [H]

Identifier: 38233778

GI number: 38233778

Start: 1186579

End: 1187397

Strand: Direct

Name: scpA [H]

Synonym: DIP1188

Alternate gene names: 38233778

Gene position: 1186579-1187397 (Clockwise)

Preceding gene: 38233777

Following gene: 38233779

Centisome position: 47.68

GC content: 47.37

Gene sequence:

>819_bases
ATGGCGAGAACTGCTGTTCCGGATAATCAACCTGAGATAACGGGTTTTCGTATCGTCCTGAATAATTTCGAAGGTCCGTT
TGACCTCTTGCTTCAGCTGATTAGTGCGAAAAAACTAGACGTAACTGATGTAGCTTTGCATAAAGTTACAGATGATTTTG
TAGCGTACACGCGTGCGTTAGGGGAATTTGCTGAGCTGGATGAAGTCACGGAGTTTCTTGTTGTAGCAGCCACGTTATTG
GACCTCAAAGCTGCTCGACTGCTTCCACGGGGTGAAGTGGATGATCTGTCTGATCTGGAGCTTTTAGAGTCGCGCGATCT
TTTGTTTGCTAGGTTGCTCCAGTACAAAGCATATAAACAGGTTGCAGATCAGTTTGCCCGCTGGCAATTGGCTGCGCAGC
GACGTTATCCGCGGGCAGTAGGCATGGAAGAACAATTTTCTTCATTACTTCCTCCGGTTAAAATTAGTCATACACCTAAG
TCTTTCGCTGAATTGGCTGCAAGTGTTTTTAGGCCAAAACCTCCGGATACAGTTGGCACAAGTCATGTGCATGGTGTTGA
AGTGTCTGTTCCAGAACAAGCTGGCAAGGTTTTGGATCTGCTCGTTGAGTGTGGCGAGGGCGTCTGGATGGATTTTCCGG
ATCTGATTACTGGTTGCAGAGTTTCATTAGAAGTTGTTGGGCGCTTCCTTGCTCTACTCGAGTTGTATAAGGCCCGAGCG
GTTTCTTTAGAACAAGAGGAATCATTAGGCGCTTTGCGGGTGTCGTGGACAGGAATTCATGTGGATCCCGCAATAGTCGC
AGCAAGTAACTGGGCATAG

Upstream 100 bases:

>100_bases
TCAAGGTGCTCAGCAATATCGGCAGCTTGCACGCGAAGTAATCGAGCGTACCGCCTAGCTCATACGCTTAGGCATAAAAG
GTTTGAAAATTTGAGGATTT

Downstream 100 bases:

>100_bases
ATCCGGAGTGAGGTTACATATGGGGGAGGCTCACATAAAAGGTTTTGTAGTGTTCTACCATCGGTAAAAATGTGGTTCTG
TCACGCGCGGATTAAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MARTAVPDNQPEITGFRIVLNNFEGPFDLLLQLISAKKLDVTDVALHKVTDDFVAYTRALGEFAELDEVTEFLVVAATLL
DLKAARLLPRGEVDDLSDLELLESRDLLFARLLQYKAYKQVADQFARWQLAAQRRYPRAVGMEEQFSSLLPPVKISHTPK
SFAELAASVFRPKPPDTVGTSHVHGVEVSVPEQAGKVLDLLVECGEGVWMDFPDLITGCRVSLEVVGRFLALLELYKARA
VSLEQEESLGALRVSWTGIHVDPAIVAASNWA

Sequences:

>Translated_272_residues
MARTAVPDNQPEITGFRIVLNNFEGPFDLLLQLISAKKLDVTDVALHKVTDDFVAYTRALGEFAELDEVTEFLVVAATLL
DLKAARLLPRGEVDDLSDLELLESRDLLFARLLQYKAYKQVADQFARWQLAAQRRYPRAVGMEEQFSSLLPPVKISHTPK
SFAELAASVFRPKPPDTVGTSHVHGVEVSVPEQAGKVLDLLVECGEGVWMDFPDLITGCRVSLEVVGRFLALLELYKARA
VSLEQEESLGALRVSWTGIHVDPAIVAASNWA
>Mature_271_residues
ARTAVPDNQPEITGFRIVLNNFEGPFDLLLQLISAKKLDVTDVALHKVTDDFVAYTRALGEFAELDEVTEFLVVAATLLD
LKAARLLPRGEVDDLSDLELLESRDLLFARLLQYKAYKQVADQFARWQLAAQRRYPRAVGMEEQFSSLLPPVKISHTPKS
FAELAASVFRPKPPDTVGTSHVHGVEVSVPEQAGKVLDLLVECGEGVWMDFPDLITGCRVSLEVVGRFLALLELYKARAV
SLEQEESLGALRVSWTGIHVDPAIVAASNWA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30098; Mature: 29967

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTAVPDNQPEITGFRIVLNNFEGPFDLLLQLISAKKLDVTDVALHKVTDDFVAYTRAL
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GEFAELDEVTEFLVVAATLLDLKAARLLPRGEVDDLSDLELLESRDLLFARLLQYKAYKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VADQFARWQLAAQRRYPRAVGMEEQFSSLLPPVKISHTPKSFAELAASVFRPKPPDTVGT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCC
SHVHGVEVSVPEQAGKVLDLLVECGEGVWMDFPDLITGCRVSLEVVGRFLALLELYKARA
CCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLEQEESLGALRVSWTGIHVDPAIVAASNWA
CCCHHHHCCCEEEEEEEEEEECCCEEECCCCC
>Mature Secondary Structure 
ARTAVPDNQPEITGFRIVLNNFEGPFDLLLQLISAKKLDVTDVALHKVTDDFVAYTRAL
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GEFAELDEVTEFLVVAATLLDLKAARLLPRGEVDDLSDLELLESRDLLFARLLQYKAYKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VADQFARWQLAAQRRYPRAVGMEEQFSSLLPPVKISHTPKSFAELAASVFRPKPPDTVGT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCC
SHVHGVEVSVPEQAGKVLDLLVECGEGVWMDFPDLITGCRVSLEVVGRFLALLELYKARA
CCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLEQEESLGALRVSWTGIHVDPAIVAASNWA
CCCHHHHCCCEEEEEEEEEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA