| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233689
Identifier: 38233689
GI number: 38233689
Start: 1077807
End: 1078934
Strand: Direct
Name: 38233689
Synonym: DIP1095
Alternate gene names: NA
Gene position: 1077807-1078934 (Clockwise)
Preceding gene: 38233688
Following gene: 38233692
Centisome position: 43.31
GC content: 51.51
Gene sequence:
>1128_bases ATGGCCGACAACAATATCCCCGATCGCGCGAGCGATTTTGACGATGACATCCCCACCTATAACGGTGGGGGAAACAACGG CGCAGAGACTTCGTCTGCACCTAATTCAGCGCATCAGGGCGCACCTAAAAAGCTAGGCAGTGGGCTTTCGGCGGCCGAAA TTTATGCTCGTGCCGGTCGTGCTGCACCGCAATCTATTAGCCCGCAACGGCCAGCGGCCAAAGTGGTAGCCAACAGTGAA AACGAAAATAAAAAAGACACTGAAGTAGTGGCTCCAGATACGCAGCCAGAAGATAGTTACAAAACGACTATCATCGAGCG CCCAGCTGTAGCACCTCAACCAGTGCTCAACGACGATCCTCATAGCAAACCATTAGCTTCAGATGCGCCGACTACGGTTT ATCCCGTTGCCCAGCCACAACCAGCTGAGCCGGAACCAGCGCCTGTGACGGACTATCATGACGAAGATTTTGCTCCGACG CCCGCAACACCAGTAGCGCCTGCAACTGCTATTGCTGAACCTGTGCCGGCGCCAGTAGCCGCTCCAGCAGTTGCCCCAGC CGTAGCACCAATGGTAACTGCTTCGAATCAACCAGTGCACAATGGAGAACCACATCGACGTGGAACTATCGACTTTGGCA TTTTGGTTTTGCGCCTATTTTTTGGCACTTGGCTCATCCTTAAGTCAGTGACGGTATTTTTTGCCATGGGATCCCATGGT GGAATCAACGCACTCCAAGAACAATTTGGTGCCTATCCTTATGCCAGCACTTTAGCGGTAGCTATTCCAGCACTTGAGCT GGCAGCAGGTGTGTTCTTAGTCTTCGGATTGCTTACTCCGGTAGCGTCCGCGTTAGCTATCATTGCCACTTCATTCATGG CGCTTCACGGTATTACTAAAGCCGGCGGAATTGATATTTTTGATCATGAAAGCTCAGTGTGGTTTGCCATATTCCTCCTG ATTATTGCGGTTGTTTTGCAATTTACAGGGCCAGGAAAATACTCCTTTGACATTTCTCGCACGTGGGCGATTCGTCCACT TGCATCCTCGTGGGTATTTGTAGTCGTAGCAGTCGCAGCTGCAGTAGCGCTGTGGTGGTTTGGAGCAGCAGTTAACCCAT TCGCATAG
Upstream 100 bases:
>100_bases GCATTGGCAACCTGCTCCTAAAATACGGTTATCAGTTTGTAATAGGTGGCGCGCCGAGGAAATACTACGTCAACTCGGCA AAACCCCTACGCTGGTCTAC
Downstream 100 bases:
>100_bases TTTTATCACAACAAGATAGTCAAAGGCCCTGGTTCCCTCTGGAATTAGAGAGGGTTAGGGCCTTTAACTTAGTGGGTTAG TCTAACTGACGTACGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MADNNIPDRASDFDDDIPTYNGGGNNGAETSSAPNSAHQGAPKKLGSGLSAAEIYARAGRAAPQSISPQRPAAKVVANSE NENKKDTEVVAPDTQPEDSYKTTIIERPAVAPQPVLNDDPHSKPLASDAPTTVYPVAQPQPAEPEPAPVTDYHDEDFAPT PATPVAPATAIAEPVPAPVAAPAVAPAVAPMVTASNQPVHNGEPHRRGTIDFGILVLRLFFGTWLILKSVTVFFAMGSHG GINALQEQFGAYPYASTLAVAIPALELAAGVFLVFGLLTPVASALAIIATSFMALHGITKAGGIDIFDHESSVWFAIFLL IIAVVLQFTGPGKYSFDISRTWAIRPLASSWVFVVVAVAAAVALWWFGAAVNPFA
Sequences:
>Translated_375_residues MADNNIPDRASDFDDDIPTYNGGGNNGAETSSAPNSAHQGAPKKLGSGLSAAEIYARAGRAAPQSISPQRPAAKVVANSE NENKKDTEVVAPDTQPEDSYKTTIIERPAVAPQPVLNDDPHSKPLASDAPTTVYPVAQPQPAEPEPAPVTDYHDEDFAPT PATPVAPATAIAEPVPAPVAAPAVAPAVAPMVTASNQPVHNGEPHRRGTIDFGILVLRLFFGTWLILKSVTVFFAMGSHG GINALQEQFGAYPYASTLAVAIPALELAAGVFLVFGLLTPVASALAIIATSFMALHGITKAGGIDIFDHESSVWFAIFLL IIAVVLQFTGPGKYSFDISRTWAIRPLASSWVFVVVAVAAAVALWWFGAAVNPFA >Mature_374_residues ADNNIPDRASDFDDDIPTYNGGGNNGAETSSAPNSAHQGAPKKLGSGLSAAEIYARAGRAAPQSISPQRPAAKVVANSEN ENKKDTEVVAPDTQPEDSYKTTIIERPAVAPQPVLNDDPHSKPLASDAPTTVYPVAQPQPAEPEPAPVTDYHDEDFAPTP ATPVAPATAIAEPVPAPVAAPAVAPAVAPMVTASNQPVHNGEPHRRGTIDFGILVLRLFFGTWLILKSVTVFFAMGSHGG INALQEQFGAYPYASTLAVAIPALELAAGVFLVFGLLTPVASALAIIATSFMALHGITKAGGIDIFDHESSVWFAIFLLI IAVVLQFTGPGKYSFDISRTWAIRPLASSWVFVVVAVAAAVALWWFGAAVNPFA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39217; Mature: 39085
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNNIPDRASDFDDDIPTYNGGGNNGAETSSAPNSAHQGAPKKLGSGLSAAEIYARAGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCHHHHHHHHHCC AAPQSISPQRPAAKVVANSENENKKDTEVVAPDTQPEDSYKTTIIERPAVAPQPVLNDDP CCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHEEEECCCCCCCCCCCCCC HSKPLASDAPTTVYPVAQPQPAEPEPAPVTDYHDEDFAPTPATPVAPATAIAEPVPAPVA CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC APAVAPAVAPMVTASNQPVHNGEPHRRGTIDFGILVLRLFFGTWLILKSVTVFFAMGSHG CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GINALQEQFGAYPYASTLAVAIPALELAAGVFLVFGLLTPVASALAIIATSFMALHGITK CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGGIDIFDHESSVWFAIFLLIIAVVLQFTGPGKYSFDISRTWAIRPLASSWVFVVVAVAA CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHH AVALWWFGAAVNPFA HHHHHHHHCCCCCCC >Mature Secondary Structure ADNNIPDRASDFDDDIPTYNGGGNNGAETSSAPNSAHQGAPKKLGSGLSAAEIYARAGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCHHHHHHHHHCC AAPQSISPQRPAAKVVANSENENKKDTEVVAPDTQPEDSYKTTIIERPAVAPQPVLNDDP CCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHEEEECCCCCCCCCCCCCC HSKPLASDAPTTVYPVAQPQPAEPEPAPVTDYHDEDFAPTPATPVAPATAIAEPVPAPVA CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC APAVAPAVAPMVTASNQPVHNGEPHRRGTIDFGILVLRLFFGTWLILKSVTVFFAMGSHG CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GINALQEQFGAYPYASTLAVAIPALELAAGVFLVFGLLTPVASALAIIATSFMALHGITK CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGGIDIFDHESSVWFAIFLLIIAVVLQFTGPGKYSFDISRTWAIRPLASSWVFVVVAVAA CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHH AVALWWFGAAVNPFA HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA