| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233619
Identifier: 38233619
GI number: 38233619
Start: 1002199
End: 1003020
Strand: Direct
Name: 38233619
Synonym: DIP1024
Alternate gene names: NA
Gene position: 1002199-1003020 (Clockwise)
Preceding gene: 38233618
Following gene: 38233620
Centisome position: 40.27
GC content: 52.92
Gene sequence:
>822_bases ATGGCACAGCAGGAAACACCCCAGGACAAGAGACGTCGACACGCGCGAGTGGACAACGTTATTTATGCAAATTTCGGGGC AAAAACAACGGTTCGCACTGAACCCGAGGCGCCAGAGATCGTCGAGTCCCGCAATTTTTCCCCAGTTGCTTTGCGAATCC GCGACTTGGCTACGCAGGAAGCAGACGCCGGCAGGTTAAAACGCGGGCGTGATTATGCACGTTCCGGCCATGTGCTCAAC GTGAAGTTTGGGAACTCGCTCATTACTGCCGACGTCGCCGGATCCCAAAACCTCCCATTCCAAGTCAGCATCGCATTTCC GTATTTAAGCACCGACGGTTTAAGCCAGATCACCCAATACATTGCTGCTTCGCCTGATGGCCTTAACGCTGCACGTCATG GTCAGCTATCAGAAGATATTTTGGATTTGTTGCTTGGCACCCAAGTGACGTTTCGTTGTGACTGCCCAGATCACGTCGTG TGCTGTAAACATTCAGTCGCTGTGGTGACGGTGGCCTCTGAAAAAGTTGAAGCGGATCCGTTGCTGGCCTTTCGACTTCG CGGGCTAGATCTAGCCCAGTTGGAGCAGGCCGTAACGATGCAAGCACGTGCGGCGAGCACTCAAGACCTGAAAGAAAGAT TCTGGCAAGGCCGCGATTTACCGTCCTTGCCGGAGCCTAAAATCGCCCCAGCTTTAGACGATTCTGATGCATCGTTGCTG CATAAAGCTATGAGGCTCGTGTCTTACACCAACATTGATGAGCTTCGGGCAGTGAGCGACATCGAAGACATCTACTACCA TCTCACCCACGAAAAGGGGTAA
Upstream 100 bases:
>100_bases TCAATTGGCTTCAGCTGTAGTCAGTGAAGGCGAAGGCTGGCTCACCGAGCTGTCTGCGGAAGAACTCGCTATGCTCATGA GTTATCGAGGACGGGAATAG
Downstream 100 bases:
>100_bases GCGTGTCACAGGCGAATGATAGAACAATTTCATGACAGTTAGGTTCCTTCACACCTCCGATCTCCAGATCGGCATGATTC GGCGATTCCTCGATTCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; Swim Zinc Finger Domain Protein; Non-Specific Serine/Threonine Protein Kinase; Snf2 Family Protein
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MAQQETPQDKRRRHARVDNVIYANFGAKTTVRTEPEAPEIVESRNFSPVALRIRDLATQEADAGRLKRGRDYARSGHVLN VKFGNSLITADVAGSQNLPFQVSIAFPYLSTDGLSQITQYIAASPDGLNAARHGQLSEDILDLLLGTQVTFRCDCPDHVV CCKHSVAVVTVASEKVEADPLLAFRLRGLDLAQLEQAVTMQARAASTQDLKERFWQGRDLPSLPEPKIAPALDDSDASLL HKAMRLVSYTNIDELRAVSDIEDIYYHLTHEKG
Sequences:
>Translated_273_residues MAQQETPQDKRRRHARVDNVIYANFGAKTTVRTEPEAPEIVESRNFSPVALRIRDLATQEADAGRLKRGRDYARSGHVLN VKFGNSLITADVAGSQNLPFQVSIAFPYLSTDGLSQITQYIAASPDGLNAARHGQLSEDILDLLLGTQVTFRCDCPDHVV CCKHSVAVVTVASEKVEADPLLAFRLRGLDLAQLEQAVTMQARAASTQDLKERFWQGRDLPSLPEPKIAPALDDSDASLL HKAMRLVSYTNIDELRAVSDIEDIYYHLTHEKG >Mature_272_residues AQQETPQDKRRRHARVDNVIYANFGAKTTVRTEPEAPEIVESRNFSPVALRIRDLATQEADAGRLKRGRDYARSGHVLNV KFGNSLITADVAGSQNLPFQVSIAFPYLSTDGLSQITQYIAASPDGLNAARHGQLSEDILDLLLGTQVTFRCDCPDHVVC CKHSVAVVTVASEKVEADPLLAFRLRGLDLAQLEQAVTMQARAASTQDLKERFWQGRDLPSLPEPKIAPALDDSDASLLH KAMRLVSYTNIDELRAVSDIEDIYYHLTHEKG
Specific function: Unknown
COG id: COG4279
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30206; Mature: 30075
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQETPQDKRRRHARVDNVIYANFGAKTTVRTEPEAPEIVESRNFSPVALRIRDLATQE CCCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHHHCC ADAGRLKRGRDYARSGHVLNVKFGNSLITADVAGSQNLPFQVSIAFPYLSTDGLSQITQY CCHHHHHCCCHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHH IAASPDGLNAARHGQLSEDILDLLLGTQVTFRCDCPDHVVCCKHSVAVVTVASEKVEADP HHCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCEEEEEEECCCCCCCC LLAFRLRGLDLAQLEQAVTMQARAASTQDLKERFWQGRDLPSLPEPKIAPALDDSDASLL EEEEHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH HKAMRLVSYTNIDELRAVSDIEDIYYHLTHEKG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQQETPQDKRRRHARVDNVIYANFGAKTTVRTEPEAPEIVESRNFSPVALRIRDLATQE CCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHHHCC ADAGRLKRGRDYARSGHVLNVKFGNSLITADVAGSQNLPFQVSIAFPYLSTDGLSQITQY CCHHHHHCCCHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHH IAASPDGLNAARHGQLSEDILDLLLGTQVTFRCDCPDHVVCCKHSVAVVTVASEKVEADP HHCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCEEEEEEECCCCCCCC LLAFRLRGLDLAQLEQAVTMQARAASTQDLKERFWQGRDLPSLPEPKIAPALDDSDASLL EEEEHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH HKAMRLVSYTNIDELRAVSDIEDIYYHLTHEKG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA