| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233576
Identifier: 38233576
GI number: 38233576
Start: 952671
End: 953582
Strand: Reverse
Name: 38233576
Synonym: DIP0981
Alternate gene names: NA
Gene position: 953582-952671 (Counterclockwise)
Preceding gene: 38233584
Following gene: 38233575
Centisome position: 38.32
GC content: 53.18
Gene sequence:
>912_bases ATGAGTCAATTCGGTGCCACTGCCATCGGTATCGCCAATATTGCCATGAACGGCGAAGTCCTTGATACCTGGTACCCAAC CCCAGAATTAGTCCCTGCCAGCACTTCTCCCTCCTACTCGGAAAGGCTTGGAGCTCAGGATCTGCCACCTAAGCTTTTGA GCCTTGTGCGTCTCGACGAAGACCGTTTGGTGGAGCAAGTTGCCGTGCGAACCTACATTGGCGATTTAGATACCCCGCCT ATCGACGCCCACGATGTGTTCCTGCGTCTGCATCTGTTGTCGCATCGTTTGGTGCGACCTCTCGAAATCAACATGGATAA TGCGATGAGCATTCTTTCTCGAGTGGTGTGGACGAACAAGGGTCCTTGTTTGCCGGAAAATTTTGAAAACATCAGAATGT CACTGCGCAACCGTGGCCTTATTCACGTCTATGGTATTGATCGTTTACCCCGCATGGTCGATTATGTGGTTCCCACAGGG GTAGAAATCACCGAAGCGGAACGTGTCCGCTTGGGCGCCTATCTTGCAGAAGGCACCAAGGTTTTGCGAGAAGGATATGT TTCTTTCAATGCAGGCACCCTTGGCGCTGGTCGAATTGAAGGCCGTTTGTATTCCGGAACAGTGGTAGGTGACAACGTCG ATCTCGGCATTTCAGCCTCGATTGTTCCTGATAAGCCCCATGCTCAGCTGCGCGTTGGTGCTAATTGCGTGTTCGGATTG GGTTCTGCTGTCATGGGGATCAACCTTGGCGACAACGTCCGCGTGGGCAACAATGTGGTGATCGACAAGGAGACGATGGT GTACTTTGCAGACCGCGACATCACCGCCGCCGCTGCGATTCTTGATGGTCAATCGGACTGGCAAATTCATGCCGAAAGTG GCCGACCGGAGCCCGTCGTTCGCCCCACATAG
Upstream 100 bases:
>100_bases ATTCGTAGTCAAATCGAGCATGGCATCGACAATACCGCGCCTCTAGGAGAAGAAGCGCTAACTTCTTCAAATCATGCCTG CTCCGTTAAGGTATTTAATT
Downstream 100 bases:
>100_bases ACACCCCCGCATAAAATTAACTTGCCGTAGATTATATGCAACGGACCTTGGGAGTTTATTCTCAGATCTATGACACAAGC AACCACTGAGACCGAGCTTG
Product: putative succinyltransferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSQFGATAIGIANIAMNGEVLDTWYPTPELVPASTSPSYSERLGAQDLPPKLLSLVRLDEDRLVEQVAVRTYIGDLDTPP IDAHDVFLRLHLLSHRLVRPLEINMDNAMSILSRVVWTNKGPCLPENFENIRMSLRNRGLIHVYGIDRLPRMVDYVVPTG VEITEAERVRLGAYLAEGTKVLREGYVSFNAGTLGAGRIEGRLYSGTVVGDNVDLGISASIVPDKPHAQLRVGANCVFGL GSAVMGINLGDNVRVGNNVVIDKETMVYFADRDITAAAAILDGQSDWQIHAESGRPEPVVRPT
Sequences:
>Translated_303_residues MSQFGATAIGIANIAMNGEVLDTWYPTPELVPASTSPSYSERLGAQDLPPKLLSLVRLDEDRLVEQVAVRTYIGDLDTPP IDAHDVFLRLHLLSHRLVRPLEINMDNAMSILSRVVWTNKGPCLPENFENIRMSLRNRGLIHVYGIDRLPRMVDYVVPTG VEITEAERVRLGAYLAEGTKVLREGYVSFNAGTLGAGRIEGRLYSGTVVGDNVDLGISASIVPDKPHAQLRVGANCVFGL GSAVMGINLGDNVRVGNNVVIDKETMVYFADRDITAAAAILDGQSDWQIHAESGRPEPVVRPT >Mature_302_residues SQFGATAIGIANIAMNGEVLDTWYPTPELVPASTSPSYSERLGAQDLPPKLLSLVRLDEDRLVEQVAVRTYIGDLDTPPI DAHDVFLRLHLLSHRLVRPLEINMDNAMSILSRVVWTNKGPCLPENFENIRMSLRNRGLIHVYGIDRLPRMVDYVVPTGV EITEAERVRLGAYLAEGTKVLREGYVSFNAGTLGAGRIEGRLYSGTVVGDNVDLGISASIVPDKPHAQLRVGANCVFGLG SAVMGINLGDNVRVGNNVVIDKETMVYFADRDITAAAAILDGQSDWQIHAESGRPEPVVRPT
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 33039; Mature: 32908
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFGATAIGIANIAMNGEVLDTWYPTPELVPASTSPSYSERLGAQDLPPKLLSLVRLDE CCCCCCCEEEEEEEEECCEEEEEECCCCCEEECCCCCCHHHHCCCCCCCHHHHHHHHCCH DRLVEQVAVRTYIGDLDTPPIDAHDVFLRLHLLSHRLVRPLEINMDNAMSILSRVVWTNK HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCC GPCLPENFENIRMSLRNRGLIHVYGIDRLPRMVDYVVPTGVEITEAERVRLGAYLAEGTK CCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHH VLREGYVSFNAGTLGAGRIEGRLYSGTVVGDNVDLGISASIVPDKPHAQLRVGANCVFGL HHHHCCEEECCCCCCCCEECCEEEECEEECCCCCCCEEEEECCCCCCCEEEECCEEEEEC GSAVMGINLGDNVRVGNNVVIDKETMVYFADRDITAAAAILDGQSDWQIHAESGRPEPVV CCEEEEECCCCCEEECCEEEEECCEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCCC RPT CCC >Mature Secondary Structure SQFGATAIGIANIAMNGEVLDTWYPTPELVPASTSPSYSERLGAQDLPPKLLSLVRLDE CCCCCCEEEEEEEEECCEEEEEECCCCCEEECCCCCCHHHHCCCCCCCHHHHHHHHCCH DRLVEQVAVRTYIGDLDTPPIDAHDVFLRLHLLSHRLVRPLEINMDNAMSILSRVVWTNK HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCC GPCLPENFENIRMSLRNRGLIHVYGIDRLPRMVDYVVPTGVEITEAERVRLGAYLAEGTK CCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHH VLREGYVSFNAGTLGAGRIEGRLYSGTVVGDNVDLGISASIVPDKPHAQLRVGANCVFGL HHHHCCEEECCCCCCCCEECCEEEECEEECCCCCCCEEEEECCCCCCCEEEECCEEEEEC GSAVMGINLGDNVRVGNNVVIDKETMVYFADRDITAAAAILDGQSDWQIHAESGRPEPVV CCEEEEECCCCCEEECCEEEEECCEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCCC RPT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA