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The map label for this gene is mshB

Identifier: 38233566

GI number: 38233566

Start: 943349

End: 944230

Strand: Direct

Name: mshB

Synonym: DIP0971

Alternate gene names: 38233566

Gene position: 943349-944230 (Clockwise)

Preceding gene: 38233565

Following gene: 38233567

Centisome position: 37.91

GC content: 60.2

Gene sequence:

>882_bases
ATGCGAGATCTCATCGGATTTAAAGCAGTAGCAGTACACGCACACCCTGACGACGAAGCCATCTGGACCGGCGGCCTCCT
CGCCAACCTAGCTGCCCGAGGTGCCGACGTCACCGTGGTCACATGTACCCTCGGCGAAGAAGGCGAAGTTATCGGCGAAC
CCTACCAAGGGCTCACCAACAAAAACGCAGATCAGCTTGGCGGATTCCGTATCCACGAGCTTCACAAGTCCCTCTCCCTC
CTAGGCGTGCGCGGCGAGTTTCTAGGAGGGGCGGGATGCTGGCGGGACTCCGGCATGATCGGCGACCCCGCCAATGAACA
CCCACGCGCCTTTATCAGCTCCGGCGATAAATCTATCGAGCAGCTCACCGAAATCTTCGAACGCCTCCAACCTGACCTTG
TGATCACCTATGGTCCAGACGGCGGCTATGGACACCCCGACCACATTCGTGCGCACAACATCACCCACACCGTGGCCGAA
AACATGGACATTCCACGAATCTTGTGGGCAGTGACTCCGCGCACGGAACTCGAGCAGGGGATGGCGGCAATCACCACCCT
TCCTAGTGGCTGGCGCCGTGCACTTCCAGGCGAAGTCGCCTGCGTCGACCACGTTGACCTCACCATTGCACTCGACGACC
ACGCTTTTGCCGCCAAAGCCGCAGCCATGCGCGCTCACGCCACCCAACTTTGGCTTGCCGACGCCACCATTTCCGACGTC
AACCCCCACGCCGCCATCGCAGGGGTCGCCGACCCCAAAGCCGCACCCCTCGTCTTTGCTCTCAGCAACCTTATTGCCCA
ACCCCTCCTAGACATCGAATGCTATCAACTAGGAGGAGGAACACCTCTGACCTCCAATGACCCCACCGAGGGCATCCGCT
AA

Upstream 100 bases:

>100_bases
TCCTAGTCCTCGGCACACAACCCGAAGGAAAAGGAACGAAATTTACCAACTGGCCCATGGGACTTACCTCCATCGGGCAA
TGGAGCATCAACGAGGAATA

Downstream 100 bases:

>100_bases
CACACAGTTTTCTCTAGGAGGTAGGAATGGCCGATCAATCGTATGTTTATCAAGGATTCAGTAGGGCAGAGGCTGCGTGG
GGAATCTTCTGGATCACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRDLIGFKAVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLGEEGEVIGEPYQGLTNKNADQLGGFRIHELHKSLSL
LGVRGEFLGGAGCWRDSGMIGDPANEHPRAFISSGDKSIEQLTEIFERLQPDLVITYGPDGGYGHPDHIRAHNITHTVAE
NMDIPRILWAVTPRTELEQGMAAITTLPSGWRRALPGEVACVDHVDLTIALDDHAFAAKAAAMRAHATQLWLADATISDV
NPHAAIAGVADPKAAPLVFALSNLIAQPLLDIECYQLGGGTPLTSNDPTEGIR

Sequences:

>Translated_293_residues
MRDLIGFKAVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLGEEGEVIGEPYQGLTNKNADQLGGFRIHELHKSLSL
LGVRGEFLGGAGCWRDSGMIGDPANEHPRAFISSGDKSIEQLTEIFERLQPDLVITYGPDGGYGHPDHIRAHNITHTVAE
NMDIPRILWAVTPRTELEQGMAAITTLPSGWRRALPGEVACVDHVDLTIALDDHAFAAKAAAMRAHATQLWLADATISDV
NPHAAIAGVADPKAAPLVFALSNLIAQPLLDIECYQLGGGTPLTSNDPTEGIR
>Mature_293_residues
MRDLIGFKAVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLGEEGEVIGEPYQGLTNKNADQLGGFRIHELHKSLSL
LGVRGEFLGGAGCWRDSGMIGDPANEHPRAFISSGDKSIEQLTEIFERLQPDLVITYGPDGGYGHPDHIRAHNITHTVAE
NMDIPRILWAVTPRTELEQGMAAITTLPSGWRRALPGEVACVDHVDLTIALDDHAFAAKAAAMRAHATQLWLADATISDV
NPHAAIAGVADPKAAPLVFALSNLIAQPLLDIECYQLGGGTPLTSNDPTEGIR

Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MshB deacetylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MSHB_CORDI (Q6NI09)

Other databases:

- EMBL:   BX248356
- RefSeq:   NP_939333.1
- ProteinModelPortal:   Q6NI09
- SMR:   Q6NI09
- GeneID:   2650698
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP0971
- NMPDR:   fig|257309.1.peg.924
- HOGENOM:   HBG666753
- OMA:   RILWAVT
- ProtClustDB:   CLSK633211
- BioCyc:   CDIP257309:DIP0971-MONOMER
- HAMAP:   MF_01696
- InterPro:   IPR003737
- InterPro:   IPR017810
- PANTHER:   PTHR12993
- TIGRFAMs:   TIGR03445

Pfam domain/function: PF02585 PIG-L

EC number: =3.5.1.103

Molecular weight: Translated: 31203; Mature: 31203

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLIGFKAVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLGEEGEVIGEPYQGLTN
CCCCCCEEEEEEEECCCCCCEECCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
KNADQLGGFRIHELHKSLSLLGVRGEFLGGAGCWRDSGMIGDPANEHPRAFISSGDKSIE
CCHHHHCCCHHHHHHHHHHHEEECHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH
QLTEIFERLQPDLVITYGPDGGYGHPDHIRAHNITHTVAENMDIPRILWAVTPRTELEQG
HHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHCCCCCEEEEEECCHHHHHHH
MAAITTLPSGWRRALPGEVACVDHVDLTIALDDHAFAAKAAAMRAHATQLWLADATISDV
HHHHHHCCCHHHHCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCC
NPHAAIAGVADPKAAPLVFALSNLIAQPLLDIECYQLGGGTPLTSNDPTEGIR
CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDLIGFKAVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLGEEGEVIGEPYQGLTN
CCCCCCEEEEEEEECCCCCCEECCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
KNADQLGGFRIHELHKSLSLLGVRGEFLGGAGCWRDSGMIGDPANEHPRAFISSGDKSIE
CCHHHHCCCHHHHHHHHHHHEEECHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH
QLTEIFERLQPDLVITYGPDGGYGHPDHIRAHNITHTVAENMDIPRILWAVTPRTELEQG
HHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHCCCCCEEEEEECCHHHHHHH
MAAITTLPSGWRRALPGEVACVDHVDLTIALDDHAFAAKAAAMRAHATQLWLADATISDV
HHHHHHCCCHHHHCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCC
NPHAAIAGVADPKAAPLVFALSNLIAQPLLDIECYQLGGGTPLTSNDPTEGIR
CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910