| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233530
Identifier: 38233530
GI number: 38233530
Start: 905267
End: 905947
Strand: Direct
Name: 38233530
Synonym: DIP0934
Alternate gene names: NA
Gene position: 905267-905947 (Clockwise)
Preceding gene: 38233528
Following gene: 38233531
Centisome position: 36.38
GC content: 55.51
Gene sequence:
>681_bases ATGCTGACACTAAGTTTCGCCACTGGAACCGAGCCAAATAAGTGGTTCACACGGTTTGAGGAACGCACCGATCATGGCGG ATTGCGCACCCTGAGTGATGACGACCCCCTTTCGTTGCTTGTCGACGCCACCGCGGATCTAGCACTCGTTAGGCTCCCAG ATCCTCGCATGGACAACGACGACACCGTGCACGTGGTGGAGCTGTATCAAGAGTCGATGGGCGTGGCATTGCCCAAAGAA CACACCTTGACGCTGCTGGACGTGGTAGAGCCAAGTGATCTTGATGGTGAGATAATTAATTACATCACCCCTCCTAGTCT TGAGGTTGATGTCGCAGCTGTTCGTGCGCAATTGCAGATGGTGGCAGCTAATGTGGGCGTGGTGATTGCTCCGCGGCCGC TATTGAAGGTTCTCAGTGGCAAGCTCGTGGAGCATCGCGAGTTTAGTGATCCGCAGCGGTATGGTCAGGCGCGTACTCGC ATTGCGTTGGTGTGGAAAAAGGAGCGCGACGGCGAGGATATCCAAGATTTTGTTGGTATTGCTAAGGGGCGGACAGTGCA GTCGTCGAGGCAGTCGAATGCCAAGAAAGTATCAGCTCGTGAAAAGACGCTGGCGAAGCAGAAGCGTCGGAAAGAGGCGG GGAAGAAACCCGTGCGCAAGGGCGGCCGGCGTAAGCGTTAA
Upstream 100 bases:
>100_bases GATGCCCAGCTTCTTTGCAGCGGTCTGCGGCTTCATTGCGGTGCCGGACGGCTTTCTTACAGATTCTTCATTCACAGGGT TAACGGTAGCATTGATTCTT
Downstream 100 bases:
>100_bases GCGTACAGGGGGTGCGCAATTGCTGGTTGTTCGCATACACTCGGTTGCTTTGGTACCGACGTTTCAGCAAGGATAGAAAT TATGAACGCACCGTCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; LysR Family Transcriptional Regulator; Regulatory Protein; LysR-Family Transcriptional Regulator
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MLTLSFATGTEPNKWFTRFEERTDHGGLRTLSDDDPLSLLVDATADLALVRLPDPRMDNDDTVHVVELYQESMGVALPKE HTLTLLDVVEPSDLDGEIINYITPPSLEVDVAAVRAQLQMVAANVGVVIAPRPLLKVLSGKLVEHREFSDPQRYGQARTR IALVWKKERDGEDIQDFVGIAKGRTVQSSRQSNAKKVSAREKTLAKQKRRKEAGKKPVRKGGRRKR
Sequences:
>Translated_226_residues MLTLSFATGTEPNKWFTRFEERTDHGGLRTLSDDDPLSLLVDATADLALVRLPDPRMDNDDTVHVVELYQESMGVALPKE HTLTLLDVVEPSDLDGEIINYITPPSLEVDVAAVRAQLQMVAANVGVVIAPRPLLKVLSGKLVEHREFSDPQRYGQARTR IALVWKKERDGEDIQDFVGIAKGRTVQSSRQSNAKKVSAREKTLAKQKRRKEAGKKPVRKGGRRKR >Mature_226_residues MLTLSFATGTEPNKWFTRFEERTDHGGLRTLSDDDPLSLLVDATADLALVRLPDPRMDNDDTVHVVELYQESMGVALPKE HTLTLLDVVEPSDLDGEIINYITPPSLEVDVAAVRAQLQMVAANVGVVIAPRPLLKVLSGKLVEHREFSDPQRYGQARTR IALVWKKERDGEDIQDFVGIAKGRTVQSSRQSNAKKVSAREKTLAKQKRRKEAGKKPVRKGGRRKR
Specific function: Unknown
COG id: COG0583
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25273; Mature: 25273
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLSFATGTEPNKWFTRFEERTDHGGLRTLSDDDPLSLLVDATADLALVRLPDPRMDND CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCC DTVHVVELYQESMGVALPKEHTLTLLDVVEPSDLDGEIINYITPPSLEVDVAAVRAQLQM CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH VAANVGVVIAPRPLLKVLSGKLVEHREFSDPQRYGQARTRIALVWKKERDGEDIQDFVGI HHHCCCEEECCHHHHHHHHCHHHHHCCCCCHHHHHHHHEEEEEEEECCCCCCHHHHHHHH AKGRTVQSSRQSNAKKVSAREKTLAKQKRRKEAGKKPVRKGGRRKR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC >Mature Secondary Structure MLTLSFATGTEPNKWFTRFEERTDHGGLRTLSDDDPLSLLVDATADLALVRLPDPRMDND CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCC DTVHVVELYQESMGVALPKEHTLTLLDVVEPSDLDGEIINYITPPSLEVDVAAVRAQLQM CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH VAANVGVVIAPRPLLKVLSGKLVEHREFSDPQRYGQARTRIALVWKKERDGEDIQDFVGI HHHCCCEEECCHHHHHHHHCHHHHHCCCCCHHHHHHHHEEEEEEEECCCCCCHHHHHHHH AKGRTVQSSRQSNAKKVSAREKTLAKQKRRKEAGKKPVRKGGRRKR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA