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The map label for this gene is 38233485

Identifier: 38233485

GI number: 38233485

Start: 861538

End: 861912

Strand: Reverse

Name: 38233485

Synonym: DIP0888

Alternate gene names: NA

Gene position: 861912-861538 (Counterclockwise)

Preceding gene: 38233486

Following gene: 38233484

Centisome position: 34.63

GC content: 53.87

Gene sequence:

>375_bases
ATGACTATGGCGAGCTTAAGAGAAACAAAAAAGATCGCAACCAAAAAAGCCCTTGCCCATGCCGCCGCTTCCCTCGTCGT
TGAAGCAGGCCTCGACGCTGCGACCGTATCCGCTATCGCCCAACGCGCTGGAGTTTCTCAACGCACCTTCCACAACTACT
TCAATTCCCGTGAGGAAGCGTTGGTTACTTTTAACTTCGAATGCATCACCGCACTCGTCGACGACATGACGCTTCTCCCC
GACGATTGGTCGTTGTACCGCAAAACCGAAGCGGTTGTGCTCAGGCACCTGGAAAAAGATGAAGCAGACCCCCGTGTCGC
TCTATTCAATTTCTACGCTCAGCGAACACCTGCACGCCCACGCGACCCAAACTGA

Upstream 100 bases:

>100_bases
ATGATCCTTTACGACAAGACGACACCCCCAGCGCATAGCGCCCCATCAATCACGGTGTCGCCGCCACACACCGGAAACTC
CGCGTTTCCCCACGGAAAGC

Downstream 100 bases:

>100_bases
GCTGGCCATGATGAACGAGAATCGGCACCACATCAATGAGCTTGTGGCAAAGATTTTCCCAGATCTTGATCCGTTTACGC
TTCGAGTACAACTGGCCATC

Product: TetR family transcriptional regulatory protein (partial)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTMASLRETKKIATKKALAHAAASLVVEAGLDAATVSAIAQRAGVSQRTFHNYFNSREEALVTFNFECITALVDDMTLLP
DDWSLYRKTEAVVLRHLEKDEADPRVALFNFYAQRTPARPRDPN

Sequences:

>Translated_124_residues
MTMASLRETKKIATKKALAHAAASLVVEAGLDAATVSAIAQRAGVSQRTFHNYFNSREEALVTFNFECITALVDDMTLLP
DDWSLYRKTEAVVLRHLEKDEADPRVALFNFYAQRTPARPRDPN
>Mature_123_residues
TMASLRETKKIATKKALAHAAASLVVEAGLDAATVSAIAQRAGVSQRTFHNYFNSREEALVTFNFECITALVDDMTLLPD
DWSLYRKTEAVVLRHLEKDEADPRVALFNFYAQRTPARPRDPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13869; Mature: 13738

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMASLRETKKIATKKALAHAAASLVVEAGLDAATVSAIAQRAGVSQRTFHNYFNSREEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCE
LVTFNFECITALVDDMTLLPDDWSLYRKTEAVVLRHLEKDEADPRVALFNFYAQRTPARP
EEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
RDPN
CCCC
>Mature Secondary Structure 
TMASLRETKKIATKKALAHAAASLVVEAGLDAATVSAIAQRAGVSQRTFHNYFNSREEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCE
LVTFNFECITALVDDMTLLPDDWSLYRKTEAVVLRHLEKDEADPRVALFNFYAQRTPARP
EEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
RDPN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA