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The map label for this gene is rpmF

Identifier: 38233450

GI number: 38233450

Start: 827283

End: 827456

Strand: Direct

Name: rpmF

Synonym: DIP0853

Alternate gene names: 38233450

Gene position: 827283-827456 (Clockwise)

Preceding gene: 38233449

Following gene: 38233451

Centisome position: 33.24

GC content: 54.6

Gene sequence:

>174_bases
ATGGCAGTTCCAAAGCGTCGTATGTCGCGTGCAAACACCCACGCACGTCGTTCCCAGTGGAAGGCAGATAACGTTGCCCT
CCAAGAAGTGAAGATCAACGGTCAGACCGTTCGCATCCCACGTCGCCTGGTTAAGGCAGCTCAGCTTGGTCTCGTTGAGG
TTGAGCAGTTCTAA

Upstream 100 bases:

>100_bases
GCGTGTCATGGACACCGCAGGCCGTGTTGAGAAGTTCAACCAGCGTTACGGTGCACTCGCTCGCCGTAAGAAGAACAAGT
AATAAAGGAGGGAAACAAAA

Downstream 100 bases:

>100_bases
GCTCTTGTGGATATAATTCCACTATCAATGAAGGCTGATTTCGGTTAGATCGAAGTCAGCCTTTATTCATTTGTAATTTA
GAAGACTTCTTTCGGAGTGT

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPKRRMSRANTHARRSQWKADNVALQEVKINGQTVRIPRRLVKAAQLGLVEVEQF

Sequences:

>Translated_57_residues
MAVPKRRMSRANTHARRSQWKADNVALQEVKINGQTVRIPRRLVKAAQLGLVEVEQF
>Mature_56_residues
AVPKRRMSRANTHARRSQWKADNVALQEVKINGQTVRIPRRLVKAAQLGLVEVEQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_CORDI (Q6NIC4)

Other databases:

- EMBL:   BX248356
- RefSeq:   NP_939217.1
- GeneID:   2649646
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP0853
- NMPDR:   fig|257309.1.peg.808
- HOGENOM:   HBG728381
- OMA:   THSRRSQ
- ProtClustDB:   PRK01110
- BioCyc:   CDIP257309:DIP0853-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p

EC number: NA

Molecular weight: Translated: 6554; Mature: 6423

Theoretical pI: Translated: 12.31; Mature: 12.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRMSRANTHARRSQWKADNVALQEVKINGQTVRIPRRLVKAAQLGLVEVEQF
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
AVPKRRMSRANTHARRSQWKADNVALQEVKINGQTVRIPRRLVKAAQLGLVEVEQF
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910