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The map label for this gene is 38233371

Identifier: 38233371

GI number: 38233371

Start: 750488

End: 752152

Strand: Reverse

Name: 38233371

Synonym: DIP0772

Alternate gene names: NA

Gene position: 752152-750488 (Counterclockwise)

Preceding gene: 38233372

Following gene: 38233370

Centisome position: 30.22

GC content: 59.1

Gene sequence:

>1665_bases
GTGGTACTTGGCGACGGCCCGCTGATCGTCCAATCTGACAAAACCGTGCTGCTTGAAGTGGATCATCCCCGCGCACAAGA
AGCCCGCATCGCTCTGGCGCCTTTCGCTGAGCTCGAGCGCGCTCCCGAGCACGTCCACACTTACCGCATCACCCCACTGG
CGCTGTGGAACTCCCGCGCAGCTGGTCACGACGCCGAACAAGTAGTACACGCACTAGAAACCTATTCGCGTTTCCCCGTC
CCCCAAGCCCTGCTTATCGACGTCGCCGAGACGATGTCACGCTACGGCCGAGTGCGCCTGCACAAGCACCCCGCCCACGG
ACTGATCTTAGAATCCGAAGAACCAGCAATTCTGGCCGAGCTTCTTCGCCATAAGAAGATCAAACCCATGCTAGGTGCTC
GTATCGACGACGAATCCATCATCGTCCACCCCTCCGAACGCGGACGCTTAAAACAAGAACTCCTGAAAGTCGGTTGGCCA
GCAGAAGACCTCGCAGGCTACGTCGACGGTGAGGCTCACCCCGTAGCATTGTCCACCGAACATGAGCAGTGGGAACTTCG
CGACTACCAGCGCATGGCTGCAGACTCCTTCTGGGAGGGCGGCTCCGGAGTCGTGGTACTGCCCTGTGGCGCTGGAAAAA
CCATGGTCGGTGCCGCTGCCATGGCAAAAGCCCAAGCCACCACACTGATCTTGGTGACCAATACCGTAGCCGGCCGCCAG
TGGCGTGACGAGCTCCTTCGCCGCACCACCCTCACCCCCGAAGAAATCGGGGAATACTCAGGCGAGAAAAAAGAAATCCG
CCCCATCACCATCGCCACCTACCAAGTTGTCACCCGCAAAACTAAAGGTGAATACCGCGCACTCGAACTATTCGACTCAC
GCGACTGGGGACTCATTATCTACGACGAAGTCCACCTCCTCCCCGCCCCCGTCTTCCGACTCACCTCAGACCTCCAATCA
CGTCGCCGCCTAGGACTTACCGCAACACTCGTCCGCGAAGATGGACGCGAAGGCGATGTATTCTCACTCATCGGCCCCAA
GCGCTACGACGCCCCGTGGAAAGACCTAGAAACCCAAGGTTTTATCGCCACCGCCGAATGCACCGAAGTGCGCACCACCA
TGACCGAATCGGAACGCATGGTCTACGCCACGGCCGAAAATCAAGACCGCTACCGCCTTGCAGCCTGCGCGGCCAGCAAA
CTGCGTGCCGTCGATAAGCTCGTAGCACAACACACAGGACAGCCCACCCTCATCATCGGCGCCTACGTCGACCAACTAGC
AGAAATCGGCGAACGCCTACACACCCCCGTGGTTGATGGTTCCACATCCAATAAAAAACGTGAAGAACTCTTCTCTGCCT
TCCGGAACGGTGAAATCACCACCCTCGTCGTGAGCAAAGTAGCAAACTTCTCCATCGACCTGCCCGAAGCCGCCGTAGCG
ATTCAAGTCTCCGGAACCTTCGGATCCCGCCAAGAAGAGGCCCAACGACTCGGCCGCCTGCTACGCCCCAAAGCAGACGG
TGCCCACGCGCATTTCTACACTGTAGTAAGCCGCGATAGCCTAGATAGTGACTACGCAGCCCACCGGCAACGATTCCTCG
CCGAACAGGGCTACGCCTACCGCATCATCGACGCCGCCGACCTGCCCGCACTCACCAAGGACTAA

Upstream 100 bases:

>100_bases
CATCCACTTCATGCTGCACCGAATCACGGAAGTCGCACTCGATTCCGGTGCATAATAGAGTGTTCATCGACTCATATGTT
CTAGTTTCAGGAGATACTCC

Downstream 100 bases:

>100_bases
CACCATGGCACACTTCTCCTTCCCCATCGACGCCGACTTCGCCGCAAAAAACAACGAGCTACTCAAAGACACCAAACGCC
TCCAACTCTCCGCAGGTCTA

Product: putative ATP-dependent DNA helicase

Products: NA

Alternate protein names: DNA Repair Helicase; Type III Restriction Res Subunit; Helicase Domain Protein; Helicase Domain-Containing Protein; ATP-Dependent DNA Helicase; DNA Repair Helicase RAD; DNA/RNA Helicase; DNA Repair Helicase Rad; Type III Restriction Res Subunit Family; Helicase; DNA Repair Protein Rad; DNA Repair Protein; DNA/RNA Helicase Superfamily II; DNA Repair Protein RAD; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Helicase Protein; ATP-Dependent Helicase; DNA Helicase; DNA Or RNA Helicase Of Superfamily II; Helicase ATP-Dependent; Helicase DNA Repair; DNA Or RNA Helicase; Helicase DNA Repair Rad; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction Endonuclease Family Protein; XPB/RAD25-Related Helicase; Helicase ATP-Dependent Intein-Containing; DEAD/DEAH Box Helicase-Like; DNA-Helicase; DNA Or RNA Helicase Of Superfamily Protein II

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MVLGDGPLIVQSDKTVLLEVDHPRAQEARIALAPFAELERAPEHVHTYRITPLALWNSRAAGHDAEQVVHALETYSRFPV
PQALLIDVAETMSRYGRVRLHKHPAHGLILESEEPAILAELLRHKKIKPMLGARIDDESIIVHPSERGRLKQELLKVGWP
AEDLAGYVDGEAHPVALSTEHEQWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAGRQ
WRDELLRRTTLTPEEIGEYSGEKKEIRPITIATYQVVTRKTKGEYRALELFDSRDWGLIIYDEVHLLPAPVFRLTSDLQS
RRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLETQGFIATAECTEVRTTMTESERMVYATAENQDRYRLAACAASK
LRAVDKLVAQHTGQPTLIIGAYVDQLAEIGERLHTPVVDGSTSNKKREELFSAFRNGEITTLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKADGAHAHFYTVVSRDSLDSDYAAHRQRFLAEQGYAYRIIDAADLPALTKD

Sequences:

>Translated_554_residues
MVLGDGPLIVQSDKTVLLEVDHPRAQEARIALAPFAELERAPEHVHTYRITPLALWNSRAAGHDAEQVVHALETYSRFPV
PQALLIDVAETMSRYGRVRLHKHPAHGLILESEEPAILAELLRHKKIKPMLGARIDDESIIVHPSERGRLKQELLKVGWP
AEDLAGYVDGEAHPVALSTEHEQWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAGRQ
WRDELLRRTTLTPEEIGEYSGEKKEIRPITIATYQVVTRKTKGEYRALELFDSRDWGLIIYDEVHLLPAPVFRLTSDLQS
RRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLETQGFIATAECTEVRTTMTESERMVYATAENQDRYRLAACAASK
LRAVDKLVAQHTGQPTLIIGAYVDQLAEIGERLHTPVVDGSTSNKKREELFSAFRNGEITTLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKADGAHAHFYTVVSRDSLDSDYAAHRQRFLAEQGYAYRIIDAADLPALTKD
>Mature_554_residues
MVLGDGPLIVQSDKTVLLEVDHPRAQEARIALAPFAELERAPEHVHTYRITPLALWNSRAAGHDAEQVVHALETYSRFPV
PQALLIDVAETMSRYGRVRLHKHPAHGLILESEEPAILAELLRHKKIKPMLGARIDDESIIVHPSERGRLKQELLKVGWP
AEDLAGYVDGEAHPVALSTEHEQWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAGRQ
WRDELLRRTTLTPEEIGEYSGEKKEIRPITIATYQVVTRKTKGEYRALELFDSRDWGLIIYDEVHLLPAPVFRLTSDLQS
RRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLETQGFIATAECTEVRTTMTESERMVYATAENQDRYRLAACAASK
LRAVDKLVAQHTGQPTLIIGAYVDQLAEIGERLHTPVVDGSTSNKKREELFSAFRNGEITTLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKADGAHAHFYTVVSRDSLDSDYAAHRQRFLAEQGYAYRIIDAADLPALTKD

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=376, Percent_Identity=37.7659574468085, Blast_Score=249, Evalue=7e-66,
Organism=Caenorhabditis elegans, GI17556358, Length=388, Percent_Identity=36.5979381443299, Blast_Score=244, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6322048, Length=608, Percent_Identity=31.0855263157895, Blast_Score=289, Evalue=8e-79,
Organism=Drosophila melanogaster, GI221331068, Length=376, Percent_Identity=37.5, Blast_Score=251, Evalue=7e-67,
Organism=Drosophila melanogaster, GI24662247, Length=376, Percent_Identity=37.5, Blast_Score=251, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61675; Mature: 61675

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGDGPLIVQSDKTVLLEVDHPRAQEARIALAPFAELERAPEHVHTYRITPLALWNSRA
CEECCCCEEEECCCEEEEEECCCCCCCCEEEECCHHHHHCCCCHHHEEEEEEEEEECCCC
AGHDAEQVVHALETYSRFPVPQALLIDVAETMSRYGRVRLHKHPAHGLILESEEPAILAE
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHH
LLRHKKIKPMLGARIDDESIIVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPVALSTE
HHHHCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECC
HEQWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAGRQ
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHH
WRDELLRRTTLTPEEIGEYSGEKKEIRPITIATYQVVTRKTKGEYRALELFDSRDWGLII
HHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEEEEEEHHHCCCCEEEEEEECCCCCCEEE
YDEVHLLPAPVFRLTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLETQG
EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC
FIATAECTEVRTTMTESERMVYATAENQDRYRLAACAASKLRAVDKLVAQHTGQPTLIIG
CEEECHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
AYVDQLAEIGERLHTPVVDGSTSNKKREELFSAFRNGEITTLVVSKVANFSIDLPEAAVA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCEEEE
IQVSGTFGSRQEEAQRLGRLLRPKADGAHAHFYTVVSRDSLDSDYAAHRQRFLAEQGYAY
EEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEE
RIIDAADLPALTKD
EEEECCCCCCCCCC
>Mature Secondary Structure
MVLGDGPLIVQSDKTVLLEVDHPRAQEARIALAPFAELERAPEHVHTYRITPLALWNSRA
CEECCCCEEEECCCEEEEEECCCCCCCCEEEECCHHHHHCCCCHHHEEEEEEEEEECCCC
AGHDAEQVVHALETYSRFPVPQALLIDVAETMSRYGRVRLHKHPAHGLILESEEPAILAE
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHH
LLRHKKIKPMLGARIDDESIIVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPVALSTE
HHHHCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECC
HEQWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAGRQ
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHH
WRDELLRRTTLTPEEIGEYSGEKKEIRPITIATYQVVTRKTKGEYRALELFDSRDWGLII
HHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEEEEEEHHHCCCCEEEEEEECCCCCCEEE
YDEVHLLPAPVFRLTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLETQG
EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC
FIATAECTEVRTTMTESERMVYATAENQDRYRLAACAASKLRAVDKLVAQHTGQPTLIIG
CEEECHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
AYVDQLAEIGERLHTPVVDGSTSNKKREELFSAFRNGEITTLVVSKVANFSIDLPEAAVA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCEEEE
IQVSGTFGSRQEEAQRLGRLLRPKADGAHAHFYTVVSRDSLDSDYAAHRQRFLAEQGYAY
EEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEE
RIIDAADLPALTKD
EEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA