| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233334
Identifier: 38233334
GI number: 38233334
Start: 703392
End: 703913
Strand: Direct
Name: 38233334
Synonym: DIP0728
Alternate gene names: NA
Gene position: 703392-703913 (Clockwise)
Preceding gene: 38233332
Following gene: 38233336
Centisome position: 28.26
GC content: 53.45
Gene sequence:
>522_bases ATGTCCAAGCGAACAACCCCCACCTATCCGGTCGAAGTGATCCGGTCGGATCGACGTACCCGGACTGTGTCGGCACGCTT GGTGGGCGGCAAAATTCTCATCAGAATTCCAGCGTCGATGTCTAAGAAAGACGAGAAAAAATTCGTCGCTGAAATGGTGG ATAAAGTACGCACTAAAACGCAGTCTTCAGCTCCTACCGATGAGGCATTGCTTCACCGTGCACAGCACCTTAACCGCACG GTGTTAGAAAACCGAGCCACGATTGGGTCTATTCGTTGGGTGACAAACCAAACACGGCGATGGGGGTCGTGTTCTCAAAC GACGAACGACATCCGCATTTCACACCGGTTACAAGGCGTACCAGATTATGTTCTCGACGCCGTGATCATCCACGAGATGG TGCATACCTTTATCGAAGGCGGACATTCCCCAGAGTTTTGGCAATGGGCAGACAAAGCCCCCAAGGCTGAACGCGCCAAG GGATACCTTGAGGCGTGGCAGCGCATGGGGGACGTTGGCTAA
Upstream 100 bases:
>100_bases ATACCTTCTGGCCGTAGCAGCACTTGGGCGTGCGGGCTAAGGCTTATGAGTCCCCCCTGATTCATGTCCACTATTGCACC ACAGAAAGCGGGTTGCTGTC
Downstream 100 bases:
>100_bases TCGTTCTTGGGGGAATCCTCATCAGGATCGGAGGGGTTTTCTCGCTGTTCCTTTTGCTGCTCTTCGGACTGCTGGGAGAG CATTTCTTCGAGCTTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal Dependant Hydrolase; Metal-Dependent Hydrolase-Like Protein
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSKRTTPTYPVEVIRSDRRTRTVSARLVGGKILIRIPASMSKKDEKKFVAEMVDKVRTKTQSSAPTDEALLHRAQHLNRT VLENRATIGSIRWVTNQTRRWGSCSQTTNDIRISHRLQGVPDYVLDAVIIHEMVHTFIEGGHSPEFWQWADKAPKAERAK GYLEAWQRMGDVG
Sequences:
>Translated_173_residues MSKRTTPTYPVEVIRSDRRTRTVSARLVGGKILIRIPASMSKKDEKKFVAEMVDKVRTKTQSSAPTDEALLHRAQHLNRT VLENRATIGSIRWVTNQTRRWGSCSQTTNDIRISHRLQGVPDYVLDAVIIHEMVHTFIEGGHSPEFWQWADKAPKAERAK GYLEAWQRMGDVG >Mature_172_residues SKRTTPTYPVEVIRSDRRTRTVSARLVGGKILIRIPASMSKKDEKKFVAEMVDKVRTKTQSSAPTDEALLHRAQHLNRTV LENRATIGSIRWVTNQTRRWGSCSQTTNDIRISHRLQGVPDYVLDAVIIHEMVHTFIEGGHSPEFWQWADKAPKAERAKG YLEAWQRMGDVG
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19751; Mature: 19620
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRTTPTYPVEVIRSDRRTRTVSARLVGGKILIRIPASMSKKDEKKFVAEMVDKVRTKT CCCCCCCCCHHHHHHCCCHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH QSSAPTDEALLHRAQHLNRTVLENRATIGSIRWVTNQTRRWGSCSQTTNDIRISHRLQGV CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC PDYVLDAVIIHEMVHTFIEGGHSPEFWQWADKAPKAERAKGYLEAWQRMGDVG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKRTTPTYPVEVIRSDRRTRTVSARLVGGKILIRIPASMSKKDEKKFVAEMVDKVRTKT CCCCCCCCHHHHHHCCCHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH QSSAPTDEALLHRAQHLNRTVLENRATIGSIRWVTNQTRRWGSCSQTTNDIRISHRLQGV CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC PDYVLDAVIIHEMVHTFIEGGHSPEFWQWADKAPKAERAKGYLEAWQRMGDVG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA