BacMap

Definition	Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession	NC_002935
Length	2,488,635

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The map label for this gene is cshA [H]

Identifier: 38233323

GI number: 38233323

Start: 688659

End: 689969

Strand: Reverse

Name: cshA [H]

Synonym: DIP0717

Alternate gene names: 38233323

Gene position: 689969-688659 (Counterclockwise)

Preceding gene: 38233324

Following gene: 38233322

Centisome position: 27.72

GC content: 55.99

Gene sequence:

>1311_bases
GTGTCTGAAGCATCTGTACAACCGACCTTCGTAGAGTTGGGCGTCGCCCGAGAAATTACCGACGCCTTGGCAACCGTAGG
CGTGAAGCGAACTTTTGCCATTCAGGAGCTCACGCTACCTATTGCTTTGGATGGCCGTGACCTGATCGGCCAAGCACGGA
CAGGCATGGGCAAAACCTATGGATTCGGTGTTCCACTCATCGATCGCGTTTTTGATGCAGCAGACGTTGCAGAGCTCGAC
GGCACTCCTCGTGCACTCGTTGTTGTTCCTACCCGCGAACTCGCCCACCAGGTAGGTGACGATCTCAAGCTATTGTCTCG
CAATATCCCCATCACGGTGGCCACGATTTACGGCGGCCGCCCCTACGAGGAACAAATTGCGCAATTAGAGTCCGGTGTCG
ATGTAGTGGTAGGCACCCCAGGCCGCCTCATTGATCTTTATCAACGTGGCAACCTTGCACTCGATCATGTGGCCGTCTTG
GTTCTAGATGAGGCCGACGAGATGCTTGATCTGGGATTTTTCCCCGACATCGAGAAGTTGCTTGCCGCGTTGACGCACCC
TCATCAAACAATGCTCTTCTCAGCAACGATGCCAGGTGCCGTGGTCACGCTGGCTCGCACTTTTATGCACCACCCTGTAC
ATATCCGTGCCGAAGACACTGGGGCAGCACAAACCCATGCATCGACCACACAGGTAATTTTCCAAGCTCATCGAATGGAT
AAGTCAGCGGTCACCGCACGCATTTTGCAAGCGGAAGGCCGTGGAAAAACTATTATCTTCGCCCGCACCAAGCGCACCGC
TGCTGAACTGGCGGACGACTTAGCGCAACGAGGATTCCGTGTCGCCGGCGTTCACGGCGATCTAGGCCAATCAGCCAGAG
AAGCCTCCCTCGATGCCTTCCGCACCGGCAAAGCCCACATTTTGGTGGCAACAGATGTGGCAGCCCGTGGCCTTGACATT
GACGACGTCACCCACGTGATCAACTACCAAACGCCCGATGATCCGATGACCTATGTACACCGCATCGGCCGCACTGGACG
CGCGGGACATACCGGAACTGCAGTCACACTCGTAGGTTACGACGAACTACCTAAATGGCAGTTGATTAACGACGAACTCA
ACCTCGGCCAGCCCGAGCCACCTCAATGGTTTTCCACCTCACCTGAGCTATTCCAAGCACTCAATATCCCCGATACCGCC
ACCGACTCCGTAGGACGCTCCCGTACAGCGGTGGGATCCCGCAAGTTTAATAAAAGCCGGTCGCCACGCTCGCAACGCCG
CCCCAGCAACAAATCTGGAAAGCGCTCATGA

Upstream 100 bases:

>100_bases
CATTGTTGAACTTCCATGACGTTGTGATGCGTGCCTACTCCCCCACAGATTCGACCCCCGAGCGAGACGATACCTAGGTA
AACCCGTTAGTATCAGTGAT

Downstream 100 bases:

>100_bases
AACCATCCGGCCAGGAAAAACCTCGCCGTAGGAGTCCTAAGACAGGCACACTACAAGGCAGCCGGCGCGACTATGTTGCC
ACAGCAATCATTTCGGTGAT

Product: putative ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSEASVQPTFVELGVAREITDALATVGVKRTFAIQELTLPIALDGRDLIGQARTGMGKTYGFGVPLIDRVFDAADVAELD
GTPRALVVVPTRELAHQVGDDLKLLSRNIPITVATIYGGRPYEEQIAQLESGVDVVVGTPGRLIDLYQRGNLALDHVAVL
VLDEADEMLDLGFFPDIEKLLAALTHPHQTMLFSATMPGAVVTLARTFMHHPVHIRAEDTGAAQTHASTTQVIFQAHRMD
KSAVTARILQAEGRGKTIIFARTKRTAAELADDLAQRGFRVAGVHGDLGQSAREASLDAFRTGKAHILVATDVAARGLDI
DDVTHVINYQTPDDPMTYVHRIGRTGRAGHTGTAVTLVGYDELPKWQLINDELNLGQPEPPQWFSTSPELFQALNIPDTA
TDSVGRSRTAVGSRKFNKSRSPRSQRRPSNKSGKRS

Sequences:

>Translated_436_residues
MSEASVQPTFVELGVAREITDALATVGVKRTFAIQELTLPIALDGRDLIGQARTGMGKTYGFGVPLIDRVFDAADVAELD
GTPRALVVVPTRELAHQVGDDLKLLSRNIPITVATIYGGRPYEEQIAQLESGVDVVVGTPGRLIDLYQRGNLALDHVAVL
VLDEADEMLDLGFFPDIEKLLAALTHPHQTMLFSATMPGAVVTLARTFMHHPVHIRAEDTGAAQTHASTTQVIFQAHRMD
KSAVTARILQAEGRGKTIIFARTKRTAAELADDLAQRGFRVAGVHGDLGQSAREASLDAFRTGKAHILVATDVAARGLDI
DDVTHVINYQTPDDPMTYVHRIGRTGRAGHTGTAVTLVGYDELPKWQLINDELNLGQPEPPQWFSTSPELFQALNIPDTA
TDSVGRSRTAVGSRKFNKSRSPRSQRRPSNKSGKRS
>Mature_435_residues
SEASVQPTFVELGVAREITDALATVGVKRTFAIQELTLPIALDGRDLIGQARTGMGKTYGFGVPLIDRVFDAADVAELDG
TPRALVVVPTRELAHQVGDDLKLLSRNIPITVATIYGGRPYEEQIAQLESGVDVVVGTPGRLIDLYQRGNLALDHVAVLV
LDEADEMLDLGFFPDIEKLLAALTHPHQTMLFSATMPGAVVTLARTFMHHPVHIRAEDTGAAQTHASTTQVIFQAHRMDK
SAVTARILQAEGRGKTIIFARTKRTAAELADDLAQRGFRVAGVHGDLGQSAREASLDAFRTGKAHILVATDVAARGLDID
DVTHVINYQTPDDPMTYVHRIGRTGRAGHTGTAVTLVGYDELPKWQLINDELNLGQPEPPQWFSTSPELFQALNIPDTAT
DSVGRSRTAVGSRKFNKSRSPRSQRRPSNKSGKRS

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=40.1129943502825, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI13129006, Length=360, Percent_Identity=40, Blast_Score=248, Evalue=6e-66,
Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=37.6657824933687, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI301171475, Length=395, Percent_Identity=36.2025316455696, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI301171467, Length=395, Percent_Identity=36.2025316455696, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI87196351, Length=395, Percent_Identity=36.2025316455696, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI169881239, Length=395, Percent_Identity=36.4556962025316, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI13514809, Length=395, Percent_Identity=36.4556962025316, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI148613856, Length=329, Percent_Identity=41.6413373860182, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI38201710, Length=329, Percent_Identity=41.6413373860182, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI262118318, Length=437, Percent_Identity=33.6384439359268, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI13518015, Length=421, Percent_Identity=34.2042755344418, Blast_Score=234, Evalue=9e-62,
Organism=Homo sapiens, GI216548263, Length=421, Percent_Identity=34.2042755344418, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI262231852, Length=421, Percent_Identity=34.2042755344418, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI222352149, Length=362, Percent_Identity=38.3977900552486, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI45446747, Length=350, Percent_Identity=36.5714285714286, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI45446743, Length=350, Percent_Identity=36.5714285714286, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI41327773, Length=359, Percent_Identity=35.3760445682451, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=36.0742705570292, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI224593278, Length=356, Percent_Identity=37.0786516853933, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI21071032, Length=413, Percent_Identity=34.3825665859564, Blast_Score=214, Evalue=9e-56,
Organism=Homo sapiens, GI55749865, Length=341, Percent_Identity=34.6041055718475, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI164419743, Length=370, Percent_Identity=35.6756756756757, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI51094101, Length=370, Percent_Identity=35.6756756756757, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI7661920, Length=367, Percent_Identity=34.3324250681199, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=33.0623306233062, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=35.0684931506849, Blast_Score=198, Evalue=7e-51,
Organism=Homo sapiens, GI31542656, Length=365, Percent_Identity=34.5205479452055, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI188035877, Length=358, Percent_Identity=32.122905027933, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI21040371, Length=380, Percent_Identity=29.2105263157895, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI4758112, Length=348, Percent_Identity=30.7471264367816, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI18375623, Length=348, Percent_Identity=30.7471264367816, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=32.5136612021858, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI164419732, Length=366, Percent_Identity=32.5136612021858, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI4503529, Length=357, Percent_Identity=31.9327731092437, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI13514831, Length=352, Percent_Identity=29.8295454545455, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI41327779, Length=380, Percent_Identity=30.2631578947368, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI83700235, Length=356, Percent_Identity=32.3033707865169, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI17505907, Length=409, Percent_Identity=29.5843520782396, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI38327634, Length=339, Percent_Identity=31.858407079646, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI4826686, Length=345, Percent_Identity=32.463768115942, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI9506931, Length=381, Percent_Identity=29.1338582677165, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI8922886, Length=367, Percent_Identity=31.3351498637602, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI6005743, Length=367, Percent_Identity=31.0626702997275, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=28.6486486486486, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=28.6486486486486, Blast_Score=151, Evalue=9e-37,
Organism=Homo sapiens, GI62241022, Length=350, Percent_Identity=31.7142857142857, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=31.3782991202346, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=27.6243093922652, Blast_Score=142, Evalue=9e-34,
Organism=Homo sapiens, GI154759257, Length=398, Percent_Identity=29.1457286432161, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=29.7805642633229, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=28.6821705426357, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=34.3891402714932, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=41.1140583554377, Blast_Score=275, Evalue=4e-75,
Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=40.5835543766578, Blast_Score=274, Evalue=7e-75,
Organism=Escherichia coli, GI1790214, Length=425, Percent_Identity=36.9411764705882, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=37.3219373219373, Blast_Score=221, Evalue=6e-59,
Organism=Escherichia coli, GI1788930, Length=324, Percent_Identity=37.962962962963, Blast_Score=210, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=40.2739726027397, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI115533224, Length=327, Percent_Identity=40.9785932721713, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI17510309, Length=389, Percent_Identity=37.5321336760925, Blast_Score=227, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=389, Percent_Identity=37.5321336760925, Blast_Score=227, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI71995514, Length=389, Percent_Identity=37.5321336760925, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI86570094, Length=367, Percent_Identity=37.6021798365123, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI32565321, Length=384, Percent_Identity=34.6354166666667, Blast_Score=222, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=37.6068376068376, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17555296, Length=376, Percent_Identity=36.436170212766, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI17537549, Length=360, Percent_Identity=35.8333333333333, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI17510559, Length=415, Percent_Identity=34.2168674698795, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17507945, Length=363, Percent_Identity=35.8126721763085, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=380, Percent_Identity=33.6842105263158, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=34.3243243243243, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=33.6870026525199, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=34.3243243243243, Blast_Score=204, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17552114, Length=388, Percent_Identity=31.1855670103093, Blast_Score=204, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI71987143, Length=358, Percent_Identity=32.122905027933, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=33.2446808510638, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI115532546, Length=365, Percent_Identity=34.2465753424658, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=366, Percent_Identity=34.1530054644809, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71999646, Length=372, Percent_Identity=32.258064516129, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71999644, Length=449, Percent_Identity=29.3986636971047, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=29.6791443850267, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI193208216, Length=381, Percent_Identity=31.758530183727, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17509811, Length=329, Percent_Identity=31.0030395136778, Blast_Score=168, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17507641, Length=381, Percent_Identity=30.4461942257218, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17505370, Length=368, Percent_Identity=29.8913043478261, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71990816, Length=399, Percent_Identity=29.3233082706767, Blast_Score=151, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=365, Percent_Identity=30.958904109589, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI193206561, Length=361, Percent_Identity=29.9168975069252, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=30.9090909090909, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=30.7304785894207, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17536103, Length=398, Percent_Identity=31.1557788944724, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=24.8768472906404, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI25148291, Length=351, Percent_Identity=29.0598290598291, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17556951, Length=389, Percent_Identity=24.6786632390745, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17508543, Length=361, Percent_Identity=26.5927977839335, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17553716, Length=379, Percent_Identity=26.1213720316623, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17557982, Length=419, Percent_Identity=25.7756563245823, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71982862, Length=196, Percent_Identity=32.1428571428571, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=24.6290801186944, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17566630, Length=343, Percent_Identity=25.0728862973761, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71997889, Length=361, Percent_Identity=27.7008310249307, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=85, Percent_Identity=41.1764705882353, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325138, Length=365, Percent_Identity=41.0958904109589, Blast_Score=265, Evalue=1e-71,
Organism=Saccharomyces cerevisiae, GI6324778, Length=337, Percent_Identity=42.433234421365, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6321360, Length=335, Percent_Identity=42.089552238806, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=38.4615384615385, Blast_Score=243, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6321856, Length=358, Percent_Identity=37.4301675977654, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6323021, Length=357, Percent_Identity=36.4145658263305, Blast_Score=209, Evalue=6e-55,
Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=32.6027397260274, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6320041, Length=372, Percent_Identity=32.5268817204301, Blast_Score=200, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6320449, Length=350, Percent_Identity=36, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6324620, Length=364, Percent_Identity=34.0659340659341, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321963, Length=383, Percent_Identity=33.9425587467363, Blast_Score=180, Evalue=5e-46,
Organism=Saccharomyces cerevisiae, GI6319714, Length=381, Percent_Identity=29.9212598425197, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6320119, Length=361, Percent_Identity=30.1939058171745, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322912, Length=337, Percent_Identity=34.1246290801187, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6322323, Length=337, Percent_Identity=34.1246290801187, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6322427, Length=334, Percent_Identity=31.7365269461078, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6323947, Length=356, Percent_Identity=31.7415730337079, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=453, Percent_Identity=27.8145695364238, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=26.5402843601896, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=335, Percent_Identity=34.0298507462687, Blast_Score=150, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6321111, Length=378, Percent_Identity=29.6296296296296, Blast_Score=149, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=26.2773722627737, Blast_Score=142, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6320173, Length=244, Percent_Identity=31.5573770491803, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6324366, Length=360, Percent_Identity=25.8333333333333, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6321374, Length=377, Percent_Identity=23.0769230769231, Blast_Score=87, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322876, Length=217, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28574962, Length=359, Percent_Identity=39.8328690807799, Blast_Score=261, Evalue=6e-70,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=37.17277486911, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=37.3983739837398, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24644479, Length=353, Percent_Identity=37.6770538243626, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI281361218, Length=353, Percent_Identity=37.6770538243626, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24644481, Length=353, Percent_Identity=37.6770538243626, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24644487, Length=353, Percent_Identity=37.6770538243626, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI45551833, Length=353, Percent_Identity=37.6770538243626, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24644485, Length=353, Percent_Identity=37.6770538243626, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24644483, Length=353, Percent_Identity=37.6770538243626, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24584399, Length=341, Percent_Identity=37.2434017595308, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=34.453781512605, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI21355075, Length=385, Percent_Identity=35.3246753246753, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=36.3888888888889, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=37.6044568245125, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=35.4285714285714, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=37.5, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=36.0881542699724, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=33.5135135135135, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24585582, Length=378, Percent_Identity=34.1269841269841, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28575014, Length=371, Percent_Identity=32.8840970350404, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24583281, Length=398, Percent_Identity=30.4020100502513, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24583279, Length=398, Percent_Identity=30.4020100502513, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24582080, Length=363, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24582078, Length=363, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI17136248, Length=363, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24582075, Length=363, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24581954, Length=374, Percent_Identity=29.6791443850267, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581952, Length=374, Percent_Identity=29.6791443850267, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581956, Length=374, Percent_Identity=29.6791443850267, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI17136814, Length=393, Percent_Identity=29.5165394402036, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI28571808, Length=349, Percent_Identity=30.3724928366762, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI28571809, Length=349, Percent_Identity=30.3724928366762, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI20130173, Length=438, Percent_Identity=30.1369863013699, Blast_Score=162, Evalue=6e-40,
Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=28.3544303797468, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI21355559, Length=366, Percent_Identity=32.2404371584699, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24666101, Length=334, Percent_Identity=32.3353293413174, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI24642822, Length=407, Percent_Identity=27.027027027027, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=31.2883435582822, Blast_Score=145, Evalue=7e-35,
Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=29.9168975069252, Blast_Score=143, Evalue=3e-34,
Organism=Drosophila melanogaster, GI19920478, Length=345, Percent_Identity=27.8260869565217, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI17136666, Length=447, Percent_Identity=28.6353467561521, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=24.9283667621776, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI28571338, Length=212, Percent_Identity=31.6037735849057, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI18859659, Length=212, Percent_Identity=31.6037735849057, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 47311; Mature: 47180

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEASVQPTFVELGVAREITDALATVGVKRTFAIQELTLPIALDGRDLIGQARTGMGKTY
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEEEEECCHHHHHHHHCCCCCCC
GFGVPLIDRVFDAADVAELDGTPRALVVVPTRELAHQVGDDLKLLSRNIPITVATIYGGR
CCCCHHHHHHHCHHHHHHCCCCCCEEEEECCHHHHHHCCCHHHHHHCCCCEEEEEEECCC
PYEEQIAQLESGVDVVVGTPGRLIDLYQRGNLALDHVAVLVLDEADEMLDLGFFPDIEKL
CHHHHHHHHHCCCEEEEECCCCEEEHHHCCCEEEEEEEEEEECCCHHHHHCCCCCCHHHH
LAALTHPHQTMLFSATMPGAVVTLARTFMHHPVHIRAEDTGAAQTHASTTQVIFQAHRMD
HHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHCCHHHHHHHHHHHCC
KSAVTARILQAEGRGKTIIFARTKRTAAELADDLAQRGFRVAGVHGDLGQSAREASLDAF
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
RTGKAHILVATDVAARGLDIDDVTHVINYQTPDDPMTYVHRIGRTGRAGHTGTAVTLVGY
HCCCEEEEEEECHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEC
DELPKWQLINDELNLGQPEPPQWFSTSPELFQALNIPDTATDSVGRSRTAVGSRKFNKSR
CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCHHHHCCHHCCCCC
SPRSQRRPSNKSGKRS
CCHHHCCCCCCCCCCC
>Mature Secondary Structure 
SEASVQPTFVELGVAREITDALATVGVKRTFAIQELTLPIALDGRDLIGQARTGMGKTY
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEEEEECCHHHHHHHHCCCCCCC
GFGVPLIDRVFDAADVAELDGTPRALVVVPTRELAHQVGDDLKLLSRNIPITVATIYGGR
CCCCHHHHHHHCHHHHHHCCCCCCEEEEECCHHHHHHCCCHHHHHHCCCCEEEEEEECCC
PYEEQIAQLESGVDVVVGTPGRLIDLYQRGNLALDHVAVLVLDEADEMLDLGFFPDIEKL
CHHHHHHHHHCCCEEEEECCCCEEEHHHCCCEEEEEEEEEEECCCHHHHHCCCCCCHHHH
LAALTHPHQTMLFSATMPGAVVTLARTFMHHPVHIRAEDTGAAQTHASTTQVIFQAHRMD
HHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHCCHHHHHHHHHHHCC
KSAVTARILQAEGRGKTIIFARTKRTAAELADDLAQRGFRVAGVHGDLGQSAREASLDAF
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
RTGKAHILVATDVAARGLDIDDVTHVINYQTPDDPMTYVHRIGRTGRAGHTGTAVTLVGY
HCCCEEEEEEECHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEC
DELPKWQLINDELNLGQPEPPQWFSTSPELFQALNIPDTATDSVGRSRTAVGSRKFNKSR
CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCHHHHCCHHCCCCC
SPRSQRRPSNKSGKRS
CCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA