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The map label for this gene is 38233305

Identifier: 38233305

GI number: 38233305

Start: 673384

End: 674052

Strand: Direct

Name: 38233305

Synonym: DIP0698

Alternate gene names: NA

Gene position: 673384-674052 (Clockwise)

Preceding gene: 38233304

Following gene: 38233306

Centisome position: 27.06

GC content: 54.11

Gene sequence:

>669_bases
GTGATCATGACCACGCCTGCTGGAAGCAACGAGACCTTGAGCCCAGATGTCAAGGTGACAATCACCGGACGTAACGTAGA
AGTGCCTGAGCACTTCGCGGAGCGGGTGAACACCAAGCTTGCAAAGATCTCCCGTCTCGATCCAACGCTGAACTTCTTCC
ATGTTGAGTTGCAGCATGAGCCAAACCCTCGTCGCTCTGAGCAATCTGATCGTATTCAGATCACCGCTACAGGTAAGGGG
CACATCGCCCGCGCCGAGGCTAAGGAAGACAGCTTCTACGCTGCTCTTGAGACTGCGCTGGCTCGTATGGAGCGTTCGCT
GCGTAAAGTTAAGGCTCGTCGTTCCATCTCCTTGTCCGGCCACCGTGCGCCTTTGGGTACTGGCGAGGCTGCAGCTGAGC
TTGTTAAGGAAGCAGAAGTTGCTCGCGAGGAAAACAAATACGATCACGATCCTTATGCCGACAAGGTAGAAGATGTCATC
CCAGGGCAGATCGTTCGTACCAAGGAGCACCCATCTACTCCAATGAGCGTGGATGACGCTCTATCTGAGATGGAACTCGT
GGGACACGATTTCTACCTCTTCGTTAACGAAGAAACCGGCCAGCCATCGGTGGTTTACCGCCGTCGCGCATTCGACTACG
GCTTGATTTCTCTCGCTAAAGAAGGATAG

Upstream 100 bases:

>100_bases
GACCAGATGTAGTGTTGGCGGTAGAAGTTGAATCCCGCCAGATAGCGGAAAGTAAGTATCCGACTTACTAAGAACCGTGG
CGGCCGACTCAGGAAGGTAC

Downstream 100 bases:

>100_bases
GTCTTCTCCCAAAGTCAGCGCACGATATCGCTATTGCTGATAGTGCTATTGTGTTAGCCTAGGCTAAATTGAGAACCCAG
ATCTCCGGCACTCGGTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIMTTPAGSNETLSPDVKVTITGRNVEVPEHFAERVNTKLAKISRLDPTLNFFHVELQHEPNPRRSEQSDRIQITATGKG
HIARAEAKEDSFYAALETALARMERSLRKVKARRSISLSGHRAPLGTGEAAAELVKEAEVAREENKYDHDPYADKVEDVI
PGQIVRTKEHPSTPMSVDDALSEMELVGHDFYLFVNEETGQPSVVYRRRAFDYGLISLAKEG

Sequences:

>Translated_222_residues
MIMTTPAGSNETLSPDVKVTITGRNVEVPEHFAERVNTKLAKISRLDPTLNFFHVELQHEPNPRRSEQSDRIQITATGKG
HIARAEAKEDSFYAALETALARMERSLRKVKARRSISLSGHRAPLGTGEAAAELVKEAEVAREENKYDHDPYADKVEDVI
PGQIVRTKEHPSTPMSVDDALSEMELVGHDFYLFVNEETGQPSVVYRRRAFDYGLISLAKEG
>Mature_222_residues
MIMTTPAGSNETLSPDVKVTITGRNVEVPEHFAERVNTKLAKISRLDPTLNFFHVELQHEPNPRRSEQSDRIQITATGKG
HIARAEAKEDSFYAALETALARMERSLRKVKARRSISLSGHRAPLGTGEAAAELVKEAEVAREENKYDHDPYADKVEDVI
PGQIVRTKEHPSTPMSVDDALSEMELVGHDFYLFVNEETGQPSVVYRRRAFDYGLISLAKEG

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 24812; Mature: 24812

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMTTPAGSNETLSPDVKVTITGRNVEVPEHFAERVNTKLAKISRLDPTLNFFHVELQHE
CEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECC
PNPRRSEQSDRIQITATGKGHIARAEAKEDSFYAALETALARMERSLRKVKARRSISLSG
CCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRAPLGTGEAAAELVKEAEVAREENKYDHDPYADKVEDVIPGQIVRTKEHPSTPMSVDDA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCHHHH
LSEMELVGHDFYLFVNEETGQPSVVYRRRAFDYGLISLAKEG
HHHHHHHCCEEEEEEECCCCCCHHEEHHHHCCCHHHEEECCC
>Mature Secondary Structure
MIMTTPAGSNETLSPDVKVTITGRNVEVPEHFAERVNTKLAKISRLDPTLNFFHVELQHE
CEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECC
PNPRRSEQSDRIQITATGKGHIARAEAKEDSFYAALETALARMERSLRKVKARRSISLSG
CCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRAPLGTGEAAAELVKEAEVAREENKYDHDPYADKVEDVIPGQIVRTKEHPSTPMSVDDA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCHHHH
LSEMELVGHDFYLFVNEETGQPSVVYRRRAFDYGLISLAKEG
HHHHHHHCCEEEEEEECCCCCCHHEEHHHHCCCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]