| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is ahcY
Identifier: 38233299
GI number: 38233299
Start: 666509
End: 667945
Strand: Direct
Name: ahcY
Synonym: DIP0692
Alternate gene names: 38233299
Gene position: 666509-667945 (Clockwise)
Preceding gene: 38233298
Following gene: 38233300
Centisome position: 26.78
GC content: 53.79
Gene sequence:
>1437_bases ATGGCTGCTTTTGATTACAACGTGAAAGACCTCAGCTTGGCTGAGGCCGGCCGCCACCAGATTCGTCTAGCCGAGTATGA AATGCCTGGCCTTATGCAGTTGCGTGAGGAATACCAGCAAGAGCAGCCATTGGCGGGCGCTCGAATCACCGGTTCGATCC ATATGACGGTTCAGACCGCAGTGCTTATCGAGACTCTAGTTGCCTTGGGTGCTCAGGTGCGTTGGGCTTCCTGCAATATT TTCTCTACTCAGGACGAGGCTGCCGCAGCTGTCGTCGTTGGTCCGCATGGCACTCCTGAAGACCCCCAAGGTGTCCCAGT GTTTGCGTGGAAAGGTGAGACGCTCGAAGAGTACTGGGACTGCGTAGATAAGATCTTTAGCTGGGGTGATGAGCTTCCTA ACATGATCTTGGACGATGGCGGCGATGCCACCATGGCTGTGATCCGTGGTAAGCAGTTCGAGGAAGCTGGCATGGTCCCA CCAGTCGAAGAAGGCGACTCGGATGAGTACCAAGCATTCCTTGGCATGTTGCGCAAGACCTTGGCAGAGCAGCCTGGTAA ATGGACCGCCATTGCCGAGTCCGTCAAGGGCGTGACGGAAGAAACCACCACTGGTGTCCACCGTCTCTACCATTTCGCAG AAGAAGGCGTTTTGCCGTTCCCTGCAATGAACGTCAACGATGCAGTGACCAAGTCCAAGTTTGACAACAAGTACGGCACT CGCCATTCGCTTATCGACGGAATCAACCGCGCCACCGATATGCTGATGGGCGGAAAGAACGTGCTGATCTGTGGCTATGG CGATGTGGGCAAGGGCTGTGCAGAAGCCATGGCTGGCCAGGGTGCACGCGTAAAGGTCACCGAAGCTGATCCGATCAATG CTTTGCAGGCTTTGATGGATGGTTTCCCAGTGGTCCATGTTGATCAAGCTATTGGCGATGCCGACATTGTGATTACTGCG ACTGGCAACATGGGCATCATCTCCTTTGAGCAGATGCTCGCTATGAAAGATCACGCAGTGTTGGGCAACATCGGCCACTT TGACAATGAGATCGACATGGCCTCGTTACTGCACCGCGATGATGTTTCGCGTGTGACCATCAAGCCACAAGTTGACGAGT TCACGTTGCCTAATGGCAAGTCCATTGTGGTGCTGTCGGAAGGCCGCCTTCTGAATTTGGGCAATGCAACCGGACACCCT AGCTTCGTGATGTCTACCTCCTTTGCTGACCAAACCATCGCGCAGATTGAGCTTTTCCAAAATGATGGCCGATACGTCAA CGAGGTATACCGCCTGCCAAAGATCTTGGACGAAAAGGTCGCTCGTATCCATGTCGAGGCATTGGGTGGCACGATTACCG AACTGACAAAGGAGCAAGCCGAATACATCGGAGTTGATGTTGCTGGCCCTTACAAGCCGGAGCATTACCGCTACTAA
Upstream 100 bases:
>100_bases TTTTCCCAGCTTGTGTGTCACGTGCTACCTGTAGGCTGGGTTCGATTTGTTTCTGCACTCCCTTTTTTGACGCAATTTCC CCAAGGAGAGAATAGCCACG
Downstream 100 bases:
>100_bases TGATCATCGCGATTGAGGGTATTGATGGCGCTGGCAAGAACACCTTGGTCAGCGCCATCAAGGAGCGTTTCGACGCCGAT GTGATCGGTTTCCCACGCTA
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MAAFDYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTAVLIETLVALGAQVRWASCNI FSTQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWDCVDKIFSWGDELPNMILDDGGDATMAVIRGKQFEEAGMVP PVEEGDSDEYQAFLGMLRKTLAEQPGKWTAIAESVKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDAVTKSKFDNKYGT RHSLIDGINRATDMLMGGKNVLICGYGDVGKGCAEAMAGQGARVKVTEADPINALQALMDGFPVVHVDQAIGDADIVITA TGNMGIISFEQMLAMKDHAVLGNIGHFDNEIDMASLLHRDDVSRVTIKPQVDEFTLPNGKSIVVLSEGRLLNLGNATGHP SFVMSTSFADQTIAQIELFQNDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKEQAEYIGVDVAGPYKPEHYRY
Sequences:
>Translated_478_residues MAAFDYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTAVLIETLVALGAQVRWASCNI FSTQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWDCVDKIFSWGDELPNMILDDGGDATMAVIRGKQFEEAGMVP PVEEGDSDEYQAFLGMLRKTLAEQPGKWTAIAESVKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDAVTKSKFDNKYGT RHSLIDGINRATDMLMGGKNVLICGYGDVGKGCAEAMAGQGARVKVTEADPINALQALMDGFPVVHVDQAIGDADIVITA TGNMGIISFEQMLAMKDHAVLGNIGHFDNEIDMASLLHRDDVSRVTIKPQVDEFTLPNGKSIVVLSEGRLLNLGNATGHP SFVMSTSFADQTIAQIELFQNDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKEQAEYIGVDVAGPYKPEHYRY >Mature_477_residues AAFDYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTAVLIETLVALGAQVRWASCNIF STQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWDCVDKIFSWGDELPNMILDDGGDATMAVIRGKQFEEAGMVPP VEEGDSDEYQAFLGMLRKTLAEQPGKWTAIAESVKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDAVTKSKFDNKYGTR HSLIDGINRATDMLMGGKNVLICGYGDVGKGCAEAMAGQGARVKVTEADPINALQALMDGFPVVHVDQAIGDADIVITAT GNMGIISFEQMLAMKDHAVLGNIGHFDNEIDMASLLHRDDVSRVTIKPQVDEFTLPNGKSIVVLSEGRLLNLGNATGHPS FVMSTSFADQTIAQIELFQNDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKEQAEYIGVDVAGPYKPEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=473, Percent_Identity=50.9513742071882, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI239937451, Length=451, Percent_Identity=51.219512195122, Blast_Score=437, Evalue=1e-123, Organism=Homo sapiens, GI298286489, Length=475, Percent_Identity=46.7368421052632, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI195539349, Length=475, Percent_Identity=46.7368421052632, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI24308043, Length=475, Percent_Identity=46.7368421052632, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI195539337, Length=475, Percent_Identity=46.7368421052632, Blast_Score=434, Evalue=1e-122, Organism=Homo sapiens, GI21361647, Length=475, Percent_Identity=44.8421052631579, Blast_Score=406, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17506425, Length=477, Percent_Identity=50.314465408805, Blast_Score=452, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6320882, Length=492, Percent_Identity=49.1869918699187, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI24642172, Length=479, Percent_Identity=52.1920668058455, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI24656245, Length=476, Percent_Identity=45.1680672268908, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI45553387, Length=475, Percent_Identity=45.4736842105263, Blast_Score=406, Evalue=1e-113, Organism=Drosophila melanogaster, GI45553385, Length=474, Percent_Identity=45.3586497890295, Blast_Score=403, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_CORDI (P61456)
Other databases:
- EMBL: BX248355 - RefSeq: NP_939066.1 - ProteinModelPortal: P61456 - SMR: P61456 - GeneID: 2650626 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP0692 - NMPDR: fig|257309.1.peg.657 - HOGENOM: HBG352029 - OMA: WLNANAV - PhylomeDB: P61456 - ProtClustDB: PRK05476 - BioCyc: CDIP257309:DIP0692-MONOMER - BRENDA: 3.3.1.1 - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 52209; Mature: 52078
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 56-56 BINDING 139-139 BINDING 201-201 BINDING 231-231 BINDING 235-235 BINDING 236-236 BINDING 288-288 BINDING 323-323 BINDING 392-392
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFDYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTA CCCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECEEEEEHHHH VLIETLVALGAQVRWASCNIFSTQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWD HHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHH CVDKIFSWGDELPNMILDDGGDATMAVIRGKQFEEAGMVPPVEEGDSDEYQAFLGMLRKT HHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH LAEQPGKWTAIAESVKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDAVTKSKFDNKYGT HHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC RHSLIDGINRATDMLMGGKNVLICGYGDVGKGCAEAMAGQGARVKVTEADPINALQALMD HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHC GFPVVHVDQAIGDADIVITATGNMGIISFEQMLAMKDHAVLGNIGHFDNEIDMASLLHRD CCCEEEECCCCCCCCEEEEECCCCCEEEHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHC DVSRVTIKPQVDEFTLPNGKSIVVLSEGRLLNLGNATGHPSFVMSTSFADQTIAQIELFQ CCCEEEECCCCCCEECCCCCEEEEEECCCEEECCCCCCCCCEEEECCCCHHHHHHEEEEC NDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKEQAEYIGVDVAGPYKPEHYRY CCCHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCCCC >Mature Secondary Structure AAFDYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTA CCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECEEEEEHHHH VLIETLVALGAQVRWASCNIFSTQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWD HHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHH CVDKIFSWGDELPNMILDDGGDATMAVIRGKQFEEAGMVPPVEEGDSDEYQAFLGMLRKT HHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH LAEQPGKWTAIAESVKGVTEETTTGVHRLYHFAEEGVLPFPAMNVNDAVTKSKFDNKYGT HHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC RHSLIDGINRATDMLMGGKNVLICGYGDVGKGCAEAMAGQGARVKVTEADPINALQALMD HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHC GFPVVHVDQAIGDADIVITATGNMGIISFEQMLAMKDHAVLGNIGHFDNEIDMASLLHRD CCCEEEECCCCCCCCEEEEECCCCCEEEHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHC DVSRVTIKPQVDEFTLPNGKSIVVLSEGRLLNLGNATGHPSFVMSTSFADQTIAQIELFQ CCCEEEECCCCCCEECCCCCEEEEEECCCEEECCCCCCCCCEEEECCCCHHHHHHEEEEC NDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKEQAEYIGVDVAGPYKPEHYRY CCCHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14602910