Click here to switch to the map view.

The map label for this gene is kefA [C]

Identifier: 38233214

GI number: 38233214

Start: 573656

End: 575113

Strand: Reverse

Name: kefA [C]

Synonym: DIP0607

Alternate gene names: 38233214

Gene position: 575113-573656 (Counterclockwise)

Preceding gene: 38233215

Following gene: 38233212

Centisome position: 23.11

GC content: 57.34

Gene sequence:

>1458_bases
ATGCCTTACGCCTACATCATGGAACTCACGAAACACTGGATCATCGCGCATGGATTTGCGCTGGCCATCCTCGTGATCAT
AGGTTTTCTGATTCCCCGTATCGGCCGCCGCATCATCAACGACATGAGCCACGCCATCGACGAAGACACCGAAGCATCCA
AAGGACGCAAAGCCATCATCGGAGCCATCGTCTACATCGCAGAAGCCATTGCTTATGCAGCGCTCATCATCACGGCCATG
CACAACCTCGGCATCAATCTCGCGGCCGCCGCAATCCCCGCCACCGTCGTATCCGCCGCCGTTGGCTTCGGATCCCAAAA
AATCATCGGAGACCTTCTCGGTGGATTCTTCATCATCACCGAAAAGCAATACGGTGTCGGCGACTGGGTGAAATTCTTCG
GCTCCGCAGCCACCGTCGAAGGCGACGTGGTCAAGATGACCCTCCGCGCCACAACAATCCGCACCATTAACGGCGACGAA
ATCACCGTCCCCAACGGCGAAGCCCGCATGTGCGTCAACTCCTCAGCCCGCTGGGCCCGCGCAGTCATCTCCATCCCCGT
GCCCATCACCGCCGGCAGCTCCATGGCCGAAATCAAAACGCGCACACTCGCCGCCGCACAACACGCAATCAACGACCCAG
AGCTCTCACCCCACATCCGCAGCGACATCACATTCCAAGCCGCCACCGACGTCATCCCGCCCACAGCCATGGGCCTACCA
TGGACCGCCACCATGCGCCTGCTTATCGACGTCGCCCCCGGCAAACAATGGCTCATCGAACGAGGCGTCCGCGCCGCAGT
CATCGACGAATGGTGGAAAGACTACGGAGAAAAAGCCAGCTCCGCAGTGGTGTTGTCGGAAGGAATCGACGATTCCTTCC
GACAATTCTCCTTAGATACGCACACGCCACCAGTTTTGGACGAAGAGACTCACTCCACTAACCCACCTGCCGATCCTGAT
CCAGAAACCGCTCGGGCGCTTACTCACGCAGCCGAAACTATCGACCTACCTCGTACAGAAGTAATGCGAGAAATCCAAGA
ACAAAGCGAAGAGGACGCTCCGCCCCAGCGCTCTCATGGGTTATTGTCCTTCGGCGGCCGTGTGCGACCGTCGACAAGCA
TCTTGATCATCTGCCTGCTCGGTTTTCTAGCACTCGGATCTATGACCTTATCCGGTGGTGAAAACAACAAAGCTGGATGG
TTGGCTCCCACGCAGACGCCAATCCCTACTGTGCCTGCGACTCCGATGAGGACGGAATCGTCGATTCCTTCCGAAAGTGT
GGAGCCTTCCACGCCTTCCATGCCTTCCAGCTCCGCCGAAAGCACCATGCCTTTGCCTAGTAGCAGCCCGAGTTCGACTC
CTTCGGAAACAACACTAGAAACACCAACGACTATCGACGAGCCCACTGTGGAATCGAGTTCGTCACCATCAGCTTCCGAA
AGTACTACTGCGCCTTAG

Upstream 100 bases:

>100_bases
GCACAGCACTACTCGGCGAAGGCGCCCCCGTGAGCACAGATACGGGGGCGCCTTCGCTTCTCTTCCCCGCGACACCCGCC
ACAGGACTACCCTTGGGCGC

Downstream 100 bases:

>100_bases
CCATCAACAGTGGTGTCTAGGCTCCGTTTTCCTTAACGCGATCTGCAACCCATGCGGTGCCTGTTTTAGGAGGTTTGTGG
CAGGAATCGACGATTCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MPYAYIMELTKHWIIAHGFALAILVIIGFLIPRIGRRIINDMSHAIDEDTEASKGRKAIIGAIVYIAEAIAYAALIITAM
HNLGINLAAAAIPATVVSAAVGFGSQKIIGDLLGGFFIITEKQYGVGDWVKFFGSAATVEGDVVKMTLRATTIRTINGDE
ITVPNGEARMCVNSSARWARAVISIPVPITAGSSMAEIKTRTLAAAQHAINDPELSPHIRSDITFQAATDVIPPTAMGLP
WTATMRLLIDVAPGKQWLIERGVRAAVIDEWWKDYGEKASSAVVLSEGIDDSFRQFSLDTHTPPVLDEETHSTNPPADPD
PETARALTHAAETIDLPRTEVMREIQEQSEEDAPPQRSHGLLSFGGRVRPSTSILIICLLGFLALGSMTLSGGENNKAGW
LAPTQTPIPTVPATPMRTESSIPSESVEPSTPSMPSSSAESTMPLPSSSPSSTPSETTLETPTTIDEPTVESSSSPSASE
STTAP

Sequences:

>Translated_485_residues
MPYAYIMELTKHWIIAHGFALAILVIIGFLIPRIGRRIINDMSHAIDEDTEASKGRKAIIGAIVYIAEAIAYAALIITAM
HNLGINLAAAAIPATVVSAAVGFGSQKIIGDLLGGFFIITEKQYGVGDWVKFFGSAATVEGDVVKMTLRATTIRTINGDE
ITVPNGEARMCVNSSARWARAVISIPVPITAGSSMAEIKTRTLAAAQHAINDPELSPHIRSDITFQAATDVIPPTAMGLP
WTATMRLLIDVAPGKQWLIERGVRAAVIDEWWKDYGEKASSAVVLSEGIDDSFRQFSLDTHTPPVLDEETHSTNPPADPD
PETARALTHAAETIDLPRTEVMREIQEQSEEDAPPQRSHGLLSFGGRVRPSTSILIICLLGFLALGSMTLSGGENNKAGW
LAPTQTPIPTVPATPMRTESSIPSESVEPSTPSMPSSSAESTMPLPSSSPSSTPSETTLETPTTIDEPTVESSSSPSASE
STTAP
>Mature_484_residues
PYAYIMELTKHWIIAHGFALAILVIIGFLIPRIGRRIINDMSHAIDEDTEASKGRKAIIGAIVYIAEAIAYAALIITAMH
NLGINLAAAAIPATVVSAAVGFGSQKIIGDLLGGFFIITEKQYGVGDWVKFFGSAATVEGDVVKMTLRATTIRTINGDEI
TVPNGEARMCVNSSARWARAVISIPVPITAGSSMAEIKTRTLAAAQHAINDPELSPHIRSDITFQAATDVIPPTAMGLPW
TATMRLLIDVAPGKQWLIERGVRAAVIDEWWKDYGEKASSAVVLSEGIDDSFRQFSLDTHTPPVLDEETHSTNPPADPDP
ETARALTHAAETIDLPRTEVMREIQEQSEEDAPPQRSHGLLSFGGRVRPSTSILIICLLGFLALGSMTLSGGENNKAGWL
APTQTPIPTVPATPMRTESSIPSESVEPSTPSMPSSSAESTMPLPSSSPSSTPSETTLETPTTIDEPTVESSSSPSASES
TTAP

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR006685 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 51640; Mature: 51509

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYAYIMELTKHWIIAHGFALAILVIIGFLIPRIGRRIINDMSHAIDEDTEASKGRKAII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH
GAIVYIAEAIAYAALIITAMHNLGINLAAAAIPATVVSAAVGFGSQKIIGDLLGGFFIIT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEE
EKQYGVGDWVKFFGSAATVEGDVVKMTLRATTIRTINGDEITVPNGEARMCVNSSARWAR
CCCCCCHHHHHHHCCCCEECCCEEEEEEEEEEEEEECCCEEECCCCCCEEEECCCCHHHH
AVISIPVPITAGSSMAEIKTRTLAAAQHAINDPELSPHIRSDITFQAATDVIPPTAMGLP
EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEHHHCCCCCCCCCCC
WTATMRLLIDVAPGKQWLIERGVRAAVIDEWWKDYGEKASSAVVLSEGIDDSFRQFSLDT
HHHEEHEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHEECCC
HTPPVLDEETHSTNPPADPDPETARALTHAAETIDLPRTEVMREIQEQSEEDAPPQRSHG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCC
LLSFGGRVRPSTSILIICLLGFLALGSMTLSGGENNKAGWLAPTQTPIPTVPATPMRTES
HHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SIPSESVEPSTPSMPSSSAESTMPLPSSSPSSTPSETTLETPTTIDEPTVESSSSPSASE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
STTAP
CCCCC
>Mature Secondary Structure 
PYAYIMELTKHWIIAHGFALAILVIIGFLIPRIGRRIINDMSHAIDEDTEASKGRKAII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH
GAIVYIAEAIAYAALIITAMHNLGINLAAAAIPATVVSAAVGFGSQKIIGDLLGGFFIIT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEE
EKQYGVGDWVKFFGSAATVEGDVVKMTLRATTIRTINGDEITVPNGEARMCVNSSARWAR
CCCCCCHHHHHHHCCCCEECCCEEEEEEEEEEEEEECCCEEECCCCCCEEEECCCCHHHH
AVISIPVPITAGSSMAEIKTRTLAAAQHAINDPELSPHIRSDITFQAATDVIPPTAMGLP
EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEHHHCCCCCCCCCCC
WTATMRLLIDVAPGKQWLIERGVRAAVIDEWWKDYGEKASSAVVLSEGIDDSFRQFSLDT
HHHEEHEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHEECCC
HTPPVLDEETHSTNPPADPDPETARALTHAAETIDLPRTEVMREIQEQSEEDAPPQRSHG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCC
LLSFGGRVRPSTSILIICLLGFLALGSMTLSGGENNKAGWLAPTQTPIPTVPATPMRTES
HHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SIPSESVEPSTPSMPSSSAESTMPLPSSSPSSTPSETTLETPTTIDEPTVESSSSPSASE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
STTAP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12948626; 8366043 [H]