| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233174
Identifier: 38233174
GI number: 38233174
Start: 534197
End: 535513
Strand: Direct
Name: 38233174
Synonym: DIP0565
Alternate gene names: NA
Gene position: 534197-535513 (Clockwise)
Preceding gene: 38233173
Following gene: 38233175
Centisome position: 21.47
GC content: 56.26
Gene sequence:
>1317_bases ATGACGCCCGATGTTGCAGGATATGGGCGGGCAGTATCGGACCTTCGCGCTGCCTCAGCCGGATTGTATTCTGGGCCCGC AATCGCCCAAGAAGCTTTAGCAAAGGCGGCAGGAACAACGAAGGGGCTGCGTACGGATGCCCTGCGCAACACCGCACAGG CCATGGTGGGTGGTAGCAGTACGGCGTTTGTGACCGACAAGTTTTGGGGCTCGCTCATCAAGATTTTGGCCCAAATTGCC ACGTCATTTATCGCTAGTGGTTTGTTGTCACTGGCGGAGCGCTGGCTTGGTGGTAGCGACGATGCCGATAACATTCAGGT GCAATCCCATCAAGCATCCGATGCGATCGATTGCGTGGACCAAGAAGCTACTACCAACATCGCCACGGTGATTAGTCAGT TGACCACGATGATCGGGCAGCTAGTAGCAACCTTGGCGGGCATTGACAAAAAGGAAAACCCAGAGGCCTTTGCCGAATGC GTTAGCGCCGGTGCACAAGCCATTGATTCCGCAGGTAAAACGATTAAACAAACATGCGAAAACCGAGACAAGGCCATCGA ACAGTGCTTTTCGACGCTCACTCACCGCACCGAAGAAAAATGCAGCGTCCAAGACCCACCACCGCCACCAGCCTGTACCG GTGGCGCTTCTGGCGGGGCACCTGTGCCAGCACCCGCAACCCAGCCTGCCGGCGTAGTAGCACCACCACCGCCACCTGCA GCCGGAGGCCGTAGCAGTGCCGGCGGTGGGGCAGCTGACATCCTTGGTGCAGTAAGTTCACTGATCAGTGGCCTATGCGA AGACAGCACCACCACAGAAGCCACAACAGAAGTCGCTACCCAGACTACGGCTGAAACCGTCGAGAAAACCTGCGAGAAAG CTAATGAGAAAAACACACGTGTGGCCACCACCACGAGCGTGACTGAAACCTGCCTTGAGGAGCAAGAATCAGAAGTAGTG GTGGTCGATTGTAAAACAGAGACAAAGTCGTGTGAACAGACATGTATAGCATCAGGTGTTATCGGTGCAGTGGGGCTAGG TATTGCAGTTCTTGGAATAGGGGCACTTATCCACTGCATAACAGAATCTATGGGCGCATTCGACTGCGTGCCACCACCAC CAACCCCCGATGTACCTCCACCACCTGCTCCTGCACCGCCACCGGTAATCGACAATGTTCCGGAGCCACCGCCACCACCT AAGCAGATTCCAGGGATGGTTCCAGCAGCCGCACCTGCGCCACCACCAGCGCCTGAGCCACCTGCTCCTGCACCGTTGTC ATCGCACATCAATGTGAAGAAAGCGGGGTCATGGTAA
Upstream 100 bases:
>100_bases GTCTAGAGTTGATCAAGCTGGGGCTAGAGGATGCTCGCCAGCGGGTTCATGATCTCTCCAATACTGATACCGAGTTTGCG GCGCGACTGGGGGCTGTGGA
Downstream 100 bases:
>100_bases TGGCCTATTCCAGTGACAAAGCGCAGCAACAGATCAACTCCTATGCGGAATTCGTCGAGTCTTTTAGACAAACAACGGCA AAGCGGATGGCTGAGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MTPDVAGYGRAVSDLRAASAGLYSGPAIAQEALAKAAGTTKGLRTDALRNTAQAMVGGSSTAFVTDKFWGSLIKILAQIA TSFIASGLLSLAERWLGGSDDADNIQVQSHQASDAIDCVDQEATTNIATVISQLTTMIGQLVATLAGIDKKENPEAFAEC VSAGAQAIDSAGKTIKQTCENRDKAIEQCFSTLTHRTEEKCSVQDPPPPPACTGGASGGAPVPAPATQPAGVVAPPPPPA AGGRSSAGGGAADILGAVSSLISGLCEDSTTTEATTEVATQTTAETVEKTCEKANEKNTRVATTTSVTETCLEEQESEVV VVDCKTETKSCEQTCIASGVIGAVGLGIAVLGIGALIHCITESMGAFDCVPPPPTPDVPPPPAPAPPPVIDNVPEPPPPP KQIPGMVPAAAPAPPPAPEPPAPAPLSSHINVKKAGSW
Sequences:
>Translated_438_residues MTPDVAGYGRAVSDLRAASAGLYSGPAIAQEALAKAAGTTKGLRTDALRNTAQAMVGGSSTAFVTDKFWGSLIKILAQIA TSFIASGLLSLAERWLGGSDDADNIQVQSHQASDAIDCVDQEATTNIATVISQLTTMIGQLVATLAGIDKKENPEAFAEC VSAGAQAIDSAGKTIKQTCENRDKAIEQCFSTLTHRTEEKCSVQDPPPPPACTGGASGGAPVPAPATQPAGVVAPPPPPA AGGRSSAGGGAADILGAVSSLISGLCEDSTTTEATTEVATQTTAETVEKTCEKANEKNTRVATTTSVTETCLEEQESEVV VVDCKTETKSCEQTCIASGVIGAVGLGIAVLGIGALIHCITESMGAFDCVPPPPTPDVPPPPAPAPPPVIDNVPEPPPPP KQIPGMVPAAAPAPPPAPEPPAPAPLSSHINVKKAGSW >Mature_437_residues TPDVAGYGRAVSDLRAASAGLYSGPAIAQEALAKAAGTTKGLRTDALRNTAQAMVGGSSTAFVTDKFWGSLIKILAQIAT SFIASGLLSLAERWLGGSDDADNIQVQSHQASDAIDCVDQEATTNIATVISQLTTMIGQLVATLAGIDKKENPEAFAECV SAGAQAIDSAGKTIKQTCENRDKAIEQCFSTLTHRTEEKCSVQDPPPPPACTGGASGGAPVPAPATQPAGVVAPPPPPAA GGRSSAGGGAADILGAVSSLISGLCEDSTTTEATTEVATQTTAETVEKTCEKANEKNTRVATTTSVTETCLEEQESEVVV VDCKTETKSCEQTCIASGVIGAVGLGIAVLGIGALIHCITESMGAFDCVPPPPTPDVPPPPAPAPPPVIDNVPEPPPPPK QIPGMVPAAAPAPPPAPEPPAPAPLSSHINVKKAGSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44173; Mature: 44042
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDVAGYGRAVSDLRAASAGLYSGPAIAQEALAKAAGTTKGLRTDALRNTAQAMVGGSS CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC TAFVTDKFWGSLIKILAQIATSFIASGLLSLAERWLGGSDDADNIQVQSHQASDAIDCVD CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHH QEATTNIATVISQLTTMIGQLVATLAGIDKKENPEAFAECVSAGAQAIDSAGKTIKQTCE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NRDKAIEQCFSTLTHRTEEKCSVQDPPPPPACTGGASGGAPVPAPATQPAGVVAPPPPPA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGGRSSAGGGAADILGAVSSLISGLCEDSTTTEATTEVATQTTAETVEKTCEKANEKNTR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VATTTSVTETCLEEQESEVVVVDCKTETKSCEQTCIASGVIGAVGLGIAVLGIGALIHCI EEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TESMGAFDCVPPPPTPDVPPPPAPAPPPVIDNVPEPPPPPKQIPGMVPAAAPAPPPAPEP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPAPLSSHINVKKAGSW CCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPDVAGYGRAVSDLRAASAGLYSGPAIAQEALAKAAGTTKGLRTDALRNTAQAMVGGSS CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC TAFVTDKFWGSLIKILAQIATSFIASGLLSLAERWLGGSDDADNIQVQSHQASDAIDCVD CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHH QEATTNIATVISQLTTMIGQLVATLAGIDKKENPEAFAECVSAGAQAIDSAGKTIKQTCE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NRDKAIEQCFSTLTHRTEEKCSVQDPPPPPACTGGASGGAPVPAPATQPAGVVAPPPPPA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGGRSSAGGGAADILGAVSSLISGLCEDSTTTEATTEVATQTTAETVEKTCEKANEKNTR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VATTTSVTETCLEEQESEVVVVDCKTETKSCEQTCIASGVIGAVGLGIAVLGIGALIHCI EEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TESMGAFDCVPPPPTPDVPPPPAPAPPPVIDNVPEPPPPPKQIPGMVPAAAPAPPPAPEP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPAPLSSHINVKKAGSW CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA