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The map label for this gene is ganQ [H]

Identifier: 38233145

GI number: 38233145

Start: 505084

End: 505962

Strand: Direct

Name: ganQ [H]

Synonym: DIP0536

Alternate gene names: 38233145

Gene position: 505084-505962 (Clockwise)

Preceding gene: 38233144

Following gene: 38233146

Centisome position: 20.3

GC content: 50.85

Gene sequence:

>879_bases
ATGAGCACTCATAAAGTTGCAATCAAAGGTAGCCAACGACGCATCCGTCGTCTGACAGACATTGCTGTTCACCTTTTCCT
CTCCATCCTCGCAATCCTGTGGGTAATCCCGATCATCTGGGTGGTAGCCGAGAGCTTTAACAAAAACAGCGCTCCCTACA
CCTCGACGTTCTTCCCCGAGGAATACGGCTTTGATAACTACATCAAACTCTTTACTGATCACTCGGTGCTGAACTTCCCC
AAGATGTTCATGAACACCTTGATCATTGCGTGCTTTACCTGTGTTATCAGTGTGGTCTTTGTTCTGTTCGTCTCGTACTC
CTTGAGCCGTCTGCGCTTCCGCTTCCGCAAGGTGTATATGAACATCGCCCTCGTCTTGGGAATGTTCCCAGGCATCATGG
CCGTTGTTGCAATTTACTTCATCTTGAAGGCTGTGGGTCTTACCCAAGGTTGGACCACCAACCTTGCTCTGATCATCGTG
TACTCGGCTGGTGCCGGCATGGGCTTCTATGTGATGAAGGGCTTCATGGATACCATCCCGATCTCCCTCGACGAAGCAGC
GCTTCTCGACGGCTGCACGAGGTGGCAGGTCTTTACCAAGATCATCCTTCCGATCTCCAAGCCAATGATCGTGTATCAAT
CCATCGTGGCCTTCCTGACCCCATGGCTCGACTTCGTTCTTGCTAAGGCCATCGCCCGCACCCAGGAGAACTACACCGTT
TCCCTTGGTTTGTGGAAGATGCTAGAGAAGGAATACATCTACGACTGGTTTGCTCGATTCGCTGCGGGTGCTGTCTGCGT
TTCCATTCCGATTACAATTCTGTTTATCGTGATGCAGCGGTACTACCAAGAATCCATGGCAGGCTCTGTCAAGGGATAA

Upstream 100 bases:

>100_bases
GTGCAGTGATCGGTATCCTCACCTTCATTGTCTTGTCTGTCGTCGCCTTGATCACGTACCGCCGAAGCGGTTCGTACCGT
AACGAGGAAGGATTCCAGTG

Downstream 100 bases:

>100_bases
AAACTAGCTTCATCAACGCCGTACTTGGCTTCTACCTAGAAGTCCTCGGGTACGGCGTTGTTGTGTGAAAAAGGCGTGAT
TAGGTGGAAACAAAACGTAA

Product: putative sugar ABC transport system membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSTHKVAIKGSQRRIRRLTDIAVHLFLSILAILWVIPIIWVVAESFNKNSAPYTSTFFPEEYGFDNYIKLFTDHSVLNFP
KMFMNTLIIACFTCVISVVFVLFVSYSLSRLRFRFRKVYMNIALVLGMFPGIMAVVAIYFILKAVGLTQGWTTNLALIIV
YSAGAGMGFYVMKGFMDTIPISLDEAALLDGCTRWQVFTKIILPISKPMIVYQSIVAFLTPWLDFVLAKAIARTQENYTV
SLGLWKMLEKEYIYDWFARFAAGAVCVSIPITILFIVMQRYYQESMAGSVKG

Sequences:

>Translated_292_residues
MSTHKVAIKGSQRRIRRLTDIAVHLFLSILAILWVIPIIWVVAESFNKNSAPYTSTFFPEEYGFDNYIKLFTDHSVLNFP
KMFMNTLIIACFTCVISVVFVLFVSYSLSRLRFRFRKVYMNIALVLGMFPGIMAVVAIYFILKAVGLTQGWTTNLALIIV
YSAGAGMGFYVMKGFMDTIPISLDEAALLDGCTRWQVFTKIILPISKPMIVYQSIVAFLTPWLDFVLAKAIARTQENYTV
SLGLWKMLEKEYIYDWFARFAAGAVCVSIPITILFIVMQRYYQESMAGSVKG
>Mature_291_residues
STHKVAIKGSQRRIRRLTDIAVHLFLSILAILWVIPIIWVVAESFNKNSAPYTSTFFPEEYGFDNYIKLFTDHSVLNFPK
MFMNTLIIACFTCVISVVFVLFVSYSLSRLRFRFRKVYMNIALVLGMFPGIMAVVAIYFILKAVGLTQGWTTNLALIIVY
SAGAGMGFYVMKGFMDTIPISLDEAALLDGCTRWQVFTKIILPISKPMIVYQSIVAFLTPWLDFVLAKAIARTQENYTVS
LGLWKMLEKEYIYDWFARFAAGAVCVSIPITILFIVMQRYYQESMAGSVKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=271, Percent_Identity=30.2583025830258, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=26.5957446808511, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33212; Mature: 33081

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHKVAIKGSQRRIRRLTDIAVHLFLSILAILWVIPIIWVVAESFNKNSAPYTSTFFPE
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EYGFDNYIKLFTDHSVLNFPKMFMNTLIIACFTCVISVVFVLFVSYSLSRLRFRFRKVYM
HCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIALVLGMFPGIMAVVAIYFILKAVGLTQGWTTNLALIIVYSAGAGMGFYVMKGFMDTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCC
ISLDEAALLDGCTRWQVFTKIILPISKPMIVYQSIVAFLTPWLDFVLAKAIARTQENYTV
CCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SLGLWKMLEKEYIYDWFARFAAGAVCVSIPITILFIVMQRYYQESMAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STHKVAIKGSQRRIRRLTDIAVHLFLSILAILWVIPIIWVVAESFNKNSAPYTSTFFPE
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EYGFDNYIKLFTDHSVLNFPKMFMNTLIIACFTCVISVVFVLFVSYSLSRLRFRFRKVYM
HCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIALVLGMFPGIMAVVAIYFILKAVGLTQGWTTNLALIIVYSAGAGMGFYVMKGFMDTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCC
ISLDEAALLDGCTRWQVFTKIILPISKPMIVYQSIVAFLTPWLDFVLAKAIARTQENYTV
CCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SLGLWKMLEKEYIYDWFARFAAGAVCVSIPITILFIVMQRYYQESMAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]