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The map label for this gene is nusG [H]

Identifier: 38233045

GI number: 38233045

Start: 395838

End: 396629

Strand: Direct

Name: nusG [H]

Synonym: DIP0431

Alternate gene names: 38233045

Gene position: 395838-396629 (Clockwise)

Preceding gene: 38233044

Following gene: 38233046

Centisome position: 15.91

GC content: 54.42

Gene sequence:

>792_bases
ATGAGCGAAGAAAACAGCTTTGCAGAAGCCTTTGATGAGGCCGTACAGAACACGATTTCCGCTGAGGCTGAAGAGTTCAC
CGCTGACGGTGAACTCGAAGTTGTGGAGGAAACTGCCCAAGAGGCAGATCTCACCGGCGGCGAGAAGAATGAAGACGCTG
AGTACAAGGCGCGTCTGCGCAAGTACACCCGTGAGCTCAAGAAGCTCCCAGGTGCTTGGTACATCATTCAGTGCTATTCG
GGATACGAGAACAAGGTAAAGACCAACCTTGATATGCGCGCCCAGACCCTCGAGGTTGAAGATTCCATCTTCGATGTCGT
TGTTCCTATCGAGCAGGCAATCGAGCTTCGCGACGGAAAGCGCAAGCTGGTTAAGCGCAAGCTGCTGCCGGGCTACGTTT
TGGTTCGTATGGACATCAACGATCGCTCATGGTCCGTTGTTCGCGACACCCCAGGTGTGACCAGCTTCGTTGGCAACGAG
GGCAACGCCACCCCAGTGAAGCACCGTGACGTCGCTAAGTTCCTCATGCCGCAGGAGGCTACCGAGTCTGAGGCTGTTAA
CGCTGAGGGTGAGAAGGTCGTCGCTATGCCAACCGATTCCACCAAGCCAAAGACCGCTGTGGACTTCGAGGTTGGCGAGG
CTGTCACCATTTTGTCCGGTGCTTTTGCCTCTGTTTCCGCAACCATTTCGGGCATTGACCACGAGAACGCAAAGATTCAG
GCACTGGTATCGATCTTTGGCCGCGAAACCCCAGTTGAATTGGCCTTCGATCAGGTTGAGAAGATCAGCTAA

Upstream 100 bases:

>100_bases
TAAGTAGGTAAGCTACTAAAAAGGTTTTATATCCCGCAGATCCTCGGATCGGCGGGATAATTTATTGGGTAGACTTCTGG
AAAAACGAGGAGAATGACGG

Downstream 100 bases:

>100_bases
CATCCTGTAGTGTTGTTGCTCGCGTGTTTTCTCACGCGTATTCATACATTTCCCGGTGGCCGAGTTACGTTTAGGGGCTC
GGCATCCGGACAGTCACATA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSEENSFAEAFDEAVQNTISAEAEEFTADGELEVVEETAQEADLTGGEKNEDAEYKARLRKYTRELKKLPGAWYIIQCYS
GYENKVKTNLDMRAQTLEVEDSIFDVVVPIEQAIELRDGKRKLVKRKLLPGYVLVRMDINDRSWSVVRDTPGVTSFVGNE
GNATPVKHRDVAKFLMPQEATESEAVNAEGEKVVAMPTDSTKPKTAVDFEVGEAVTILSGAFASVSATISGIDHENAKIQ
ALVSIFGRETPVELAFDQVEKIS

Sequences:

>Translated_263_residues
MSEENSFAEAFDEAVQNTISAEAEEFTADGELEVVEETAQEADLTGGEKNEDAEYKARLRKYTRELKKLPGAWYIIQCYS
GYENKVKTNLDMRAQTLEVEDSIFDVVVPIEQAIELRDGKRKLVKRKLLPGYVLVRMDINDRSWSVVRDTPGVTSFVGNE
GNATPVKHRDVAKFLMPQEATESEAVNAEGEKVVAMPTDSTKPKTAVDFEVGEAVTILSGAFASVSATISGIDHENAKIQ
ALVSIFGRETPVELAFDQVEKIS
>Mature_262_residues
SEENSFAEAFDEAVQNTISAEAEEFTADGELEVVEETAQEADLTGGEKNEDAEYKARLRKYTRELKKLPGAWYIIQCYSG
YENKVKTNLDMRAQTLEVEDSIFDVVVPIEQAIELRDGKRKLVKRKLLPGYVLVRMDINDRSWSVVRDTPGVTSFVGNEG
NATPVKHRDVAKFLMPQEATESEAVNAEGEKVVAMPTDSTKPKTAVDFEVGEAVTILSGAFASVSATISGIDHENAKIQA
LVSIFGRETPVELAFDQVEKIS

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusG family [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=190, Percent_Identity=37.8947368421053, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 29044; Mature: 28913

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEENSFAEAFDEAVQNTISAEAEEFTADGELEVVEETAQEADLTGGEKNEDAEYKARLR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KYTRELKKLPGAWYIIQCYSGYENKVKTNLDMRAQTLEVEDSIFDVVVPIEQAIELRDGK
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHEEEEHHHHHHHHHHCHHHHHHHCCHH
RKLVKRKLLPGYVLVRMDINDRSWSVVRDTPGVTSFVGNEGNATPVKHRDVAKFLMPQEA
HHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCCEECCCCCCCCCCCHHHHHHHHCCCCC
TESEAVNAEGEKVVAMPTDSTKPKTAVDFEVGEAVTILSGAFASVSATISGIDHENAKIQ
CCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCHHHH
ALVSIFGRETPVELAFDQVEKIS
HHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SEENSFAEAFDEAVQNTISAEAEEFTADGELEVVEETAQEADLTGGEKNEDAEYKARLR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KYTRELKKLPGAWYIIQCYSGYENKVKTNLDMRAQTLEVEDSIFDVVVPIEQAIELRDGK
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHEEEEHHHHHHHHHHCHHHHHHHCCHH
RKLVKRKLLPGYVLVRMDINDRSWSVVRDTPGVTSFVGNEGNATPVKHRDVAKFLMPQEA
HHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCCEECCCCCCCCCCCHHHHHHHHCCCCC
TESEAVNAEGEKVVAMPTDSTKPKTAVDFEVGEAVTILSGAFASVSATISGIDHENAKIQ
CCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCHHHH
ALVSIFGRETPVELAFDQVEKIS
HHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]