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The map label for this gene is yfhM [H]

Identifier: 38232929

GI number: 38232929

Start: 275218

End: 276156

Strand: Reverse

Name: yfhM [H]

Synonym: DIP0308

Alternate gene names: 38232929

Gene position: 276156-275218 (Counterclockwise)

Preceding gene: 38232930

Following gene: 38232924

Centisome position: 11.1

GC content: 60.38

Gene sequence:

>939_bases
ATGGCGGCGTTTTTTAGGCGCAGCAACCACTCCCCTAAGGTTCCACCGGTGCCGATCTCGCCACACGTTGTGGAACTCGA
AGGGCCATTTAGCCATATCATGCTCCATACCCGTGGCGTACGCCTGCATGCGGCAACTGCTGGCGACCCCACCAATCCCC
TGATAGTGCTGCTCCACGATTCCTTCGGCGGCTGGTTCGATTTCAAAGAATGCCTCGCCCCCCTTGCGGCGGCGGGTTTT
CATGTTGCCGCCATTGATTTCCGTGGCTACGGCCTCTCCGACAAGCCGCCTACGGGCTACGATCACTACCTCGCAACCGG
CGACATCGCCGGCTCGATCCGTACTTTGGGCCACGAGTCCGCGCACGTGATCGCCTGCAGTTCCGGTGCCGCGATTGCGT
GGCTGCTTGCTGCGAACTACCCGCGCCACGTCGCCTCGTTGACCACCATGGGCGCGATTCACCCCCTTGATATGCGCCGC
GCCATCATCGGCAGACCGTGGCTTTTTACCTATCCGGTCAGTATGACCACAATGTTTCGACTCCCCCGAGTCCTCAGTAA
GCGCCTGTGGCGTCTGAAGGATATGTGGGTTGAGCGCGACCTACGGCGGTGGACGTCGTTAAGCTTCCAAGCAAGCCCTA
AATTCGCGGACACACTAGCGCTGCGTCGCCTCGCCATGTCCATTGACTCCACTTTCCCCGCGGTAGCCAAAACCTCACGC
TATGTGGTCAATGTGCCGCCGCTGAAGTGGGCATCGCAGCATGTCACGGCCCCAACGCACGTGCTTGTCGACGCCACCCC
CTACGCCCGCTACCTCGCCCGACGTGCCGCATCACGCTGCACTGGGGACTTTGACACGTTCAGTATCCCCAGCACGCGAA
TGCGTCCGCATCTAGAAGACCCAGCAGCTTTTGTTGCCCAAGTGCTCAAACTTCTTTAG

Upstream 100 bases:

>100_bases
CCTCTACAGCTAGTGCACAGTTAAAGCCCCACGCTCATTGATCTAACAACGCCTCCGTTTTCGGGGCGTTGTTATGTTAT
TTAGAAGGAGCTACCCCGAT

Downstream 100 bases:

>100_bases
TTCACCACGCACTGCTGCGTGGCCACGGGGGTGTGCAGCGCACTGGTATCGCCTACCATATTGAGCACTTCTTTGGCGGT
GAGGGCATAGCCAATATCTG

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAAFFRRSNHSPKVPPVPISPHVVELEGPFSHIMLHTRGVRLHAATAGDPTNPLIVLLHDSFGGWFDFKECLAPLAAAGF
HVAAIDFRGYGLSDKPPTGYDHYLATGDIAGSIRTLGHESAHVIACSSGAAIAWLLAANYPRHVASLTTMGAIHPLDMRR
AIIGRPWLFTYPVSMTTMFRLPRVLSKRLWRLKDMWVERDLRRWTSLSFQASPKFADTLALRRLAMSIDSTFPAVAKTSR
YVVNVPPLKWASQHVTAPTHVLVDATPYARYLARRAASRCTGDFDTFSIPSTRMRPHLEDPAAFVAQVLKLL

Sequences:

>Translated_312_residues
MAAFFRRSNHSPKVPPVPISPHVVELEGPFSHIMLHTRGVRLHAATAGDPTNPLIVLLHDSFGGWFDFKECLAPLAAAGF
HVAAIDFRGYGLSDKPPTGYDHYLATGDIAGSIRTLGHESAHVIACSSGAAIAWLLAANYPRHVASLTTMGAIHPLDMRR
AIIGRPWLFTYPVSMTTMFRLPRVLSKRLWRLKDMWVERDLRRWTSLSFQASPKFADTLALRRLAMSIDSTFPAVAKTSR
YVVNVPPLKWASQHVTAPTHVLVDATPYARYLARRAASRCTGDFDTFSIPSTRMRPHLEDPAAFVAQVLKLL
>Mature_311_residues
AAFFRRSNHSPKVPPVPISPHVVELEGPFSHIMLHTRGVRLHAATAGDPTNPLIVLLHDSFGGWFDFKECLAPLAAAGFH
VAAIDFRGYGLSDKPPTGYDHYLATGDIAGSIRTLGHESAHVIACSSGAAIAWLLAANYPRHVASLTTMGAIHPLDMRRA
IIGRPWLFTYPVSMTTMFRLPRVLSKRLWRLKDMWVERDLRRWTSLSFQASPKFADTLALRRLAMSIDSTFPAVAKTSRY
VVNVPPLKWASQHVTAPTHVLVDATPYARYLARRAASRCTGDFDTFSIPSTRMRPHLEDPAAFVAQVLKLL

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=141, Percent_Identity=29.7872340425532, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17554012, Length=130, Percent_Identity=33.8461538461538, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34613; Mature: 34482

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFFRRSNHSPKVPPVPISPHVVELEGPFSHIMLHTRGVRLHAATAGDPTNPLIVLLHD
CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHEEEEEECCEEEEEECCCCCCCCEEEEEEC
SFGGWFDFKECLAPLAAAGFHVAAIDFRGYGLSDKPPTGYDHYLATGDIAGSIRTLGHES
CCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHCCCCC
AHVIACSSGAAIAWLLAANYPRHVASLTTMGAIHPLDMRRAIIGRPWLFTYPVSMTTMFR
CEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECHHHHHHHH
LPRVLSKRLWRLKDMWVERDLRRWTSLSFQASPKFADTLALRRLAMSIDSTFPAVAKTSR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCC
YVVNVPPLKWASQHVTAPTHVLVDATPYARYLARRAASRCTGDFDTFSIPSTRMRPHLED
EEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC
PAAFVAQVLKLL
HHHHHHHHHHHC
>Mature Secondary Structure 
AAFFRRSNHSPKVPPVPISPHVVELEGPFSHIMLHTRGVRLHAATAGDPTNPLIVLLHD
CCCCCCCCCCCCCCCCCCCCEEEEECCCHHEEEEEECCEEEEEECCCCCCCCEEEEEEC
SFGGWFDFKECLAPLAAAGFHVAAIDFRGYGLSDKPPTGYDHYLATGDIAGSIRTLGHES
CCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHCCCCC
AHVIACSSGAAIAWLLAANYPRHVASLTTMGAIHPLDMRRAIIGRPWLFTYPVSMTTMFR
CEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECHHHHHHHH
LPRVLSKRLWRLKDMWVERDLRRWTSLSFQASPKFADTLALRRLAMSIDSTFPAVAKTSR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCC
YVVNVPPLKWASQHVTAPTHVLVDATPYARYLARRAASRCTGDFDTFSIPSTRMRPHLED
EEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC
PAAFVAQVLKLL
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]