| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232904
Identifier: 38232904
GI number: 38232904
Start: 250325
End: 251878
Strand: Reverse
Name: 38232904
Synonym: DIP0283
Alternate gene names: NA
Gene position: 251878-250325 (Counterclockwise)
Preceding gene: 38232905
Following gene: 38232903
Centisome position: 10.12
GC content: 57.59
Gene sequence:
>1554_bases ATGAGAACTGGGTTGTGGATTTTTTCGGTGGTGGCGATCGCCGCGGTGGCGGTGGGCATTCCTTATGCCATGTTGTTGAA AGCGGCAGGGACGGGCACTGCGGCGGTCGCACCGATCATCCTCAGCAGCACAATTGCATTGTGTGCAACTTTGTTGGCGG TGGGTATTGGCACGGTGGGTGCGTTGGCGGCAGCGCAGTTTTCTCGTACAGTAGTATTGCTTCTCGACGTCATCCTGCTG TTCCAGCTCACCATCCCGCATTTTGTTATCGGTGCTGGTTGGAAGACGATCATGGGACGCACGGGTATTCACCTGTGCTC GCAGTGTAATTTTTCGGGCCTTGGGCCGTTGTTGTTCACGTTCACGGTGGCGTTTACCCCGTTGGCATATTTTGTGCAGC GCACGGCGTTGCGCTCGGTGTCGTCGCGTGAGGTGGATGCGGCTCGGGTGGCGGGCCTTCATGGGTGGGCGTTGTTTCGC GCGGTGTATCAGCCGCGGTTGGTGTTGTTTGCCCCTGCGCTTGCAGTGTTTATTTTTAGTGCGGCGTTGTCGGATCCGGT AACGCCGAATGTGATGGCGCCGCGGGCGTCGTTAGCGGCAACACGGGTGTGGTTCCAAGGCGATCAGGCGGGGACTGCGC TGGCGCTTACGTTGCCGGTGGCTGGTGCGGTGGTCGTTGCGGGGCTGGTGTATGCACGGCTGTTGCGTAGTAATCCGGCG TTGGTGGAGTTGCTTCATTTTGCTGGCAATTCTTCCGGCCAGCCACATCGTGCGGTGGGTGCGCAAGTGCGTGCCCCGCA GGCGGTGTTGTGCTTCTTGGGTGCAGTTGCGGGATTATTTGTGCTGGTGGCGGCCTTTCGTGGTTTTGTGCATGGTTCTG AGACGCCGATGGGCAATGCGGTGGTCAATACGGTGGGGTTGGCGTTTTTGGTGTTGTTGTGTTCGTTGTTGTTGTCGGCG GTTGCGTTGGGGGCGCGGCGTTCGTGTGGCCTGCGGTGGGGTTGGTTGGGCCGGCGTGGTATTGATGCTGTGTTTGCGTT GTTGGCGTTGTCGCCGGGGGCTGCGATTGGTTGTGGTTTGCAGATTGCGTTGAATCATCCGGGAGTGTACGGGCCGTGGG CGTCGTTAAGTTTGGTGTTGTTGGCGTGTCTGCCGAGTTCGCTGGCTATGACGTATTTTTTGATGGTTTATATCGGTCCG TTGATGTCGCGTTCGGAGTATATGGTGTCGTTGTTGCAGGGTGTTGGCCCACTGCGGGCGGTGGCGTCGATTGTGTTGCC GCGTTCGACGAATGTGGTGATTTTGGGCTTTTTGATGGTGTTTTCTAATGCGTCGGTACTAGCGGTGCCGTTGTTGTGGG TGAGTTCGCCGGATACTCCCCTTTTGATGTTGCGGCTTTTCACGCTTCTCGACGCCGCCAATTACCCGGCGGCGCTGTAC ATCAGCATGACTGTGTCTCTTTTTATCGTGTCCCTTGCTGGGGCGATCGTTGTGAGTATTAATGGCGTGGGTTTGGCTGC CTTCGCTAGGAAACAGGTGGCATCATGGCGTTAA
Upstream 100 bases:
>100_bases CTACGCGTTTGAAGGATTCGCATGGCATTGTTGCGGTGGATCCGGCGGTTGCCGATTCTGAGCGTGATCGGTGGATGAGT TGGTTTTCGGAGCAGCGGGC
Downstream 100 bases:
>100_bases TACATATTCAGGGTCTTAGTGTGACCAGCCGCGGGGCGCGCCTTTTGGATGATGTTTCTTTGGAGGCGGATCCTGGTGAG CTCATTGTGGTTCTTGGGCG
Product: putative transport system permease (iron)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILL FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR
Sequences:
>Translated_517_residues MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILL FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR >Mature_517_residues MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILL FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53949; Mature: 53949
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVG CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAAQFSRTVVLLLDVILLFQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHH FTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFRAVYQPRLVLFAPALAVFIFS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA HHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHH LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNA HHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH VVNTVGLAFLVLLCSLLLSAVALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGL HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCE QIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGPLMSRSEYMVSLLQGVGPLRA EEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH VASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY HHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEH ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVG CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAAQFSRTVVLLLDVILLFQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHH FTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFRAVYQPRLVLFAPALAVFIFS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA HHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHH LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNA HHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH VVNTVGLAFLVLLCSLLLSAVALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGL HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCE QIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGPLMSRSEYMVSLLQGVGPLRA EEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH VASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY HHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEH ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA