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The map label for this gene is cobQ [H]

Identifier: 38232885

GI number: 38232885

Start: 224581

End: 225333

Strand: Reverse

Name: cobQ [H]

Synonym: DIP0262

Alternate gene names: 38232885

Gene position: 225333-224581 (Counterclockwise)

Preceding gene: 38232886

Following gene: 38232878

Centisome position: 9.05

GC content: 61.49

Gene sequence:

>753_bases
ATGAGCGAATTAACCATCGGTTTAATCCTGCCGGACGTGTTGGGCACCTACGGTGACGACGGCAACGCCCTCGTCCTGCG
CCAGCGCGCCCGCCTGCGTGGTATCTCCGCGGAGATCCACACGGTTCGCCTCGGCGAAGCCGTTCCCGAGGGTCTCGATC
TCTACTGCCTCGGCGGCGGCGAAGACACCGCCCAGATCTTGGCAGCAGAACACCTCAACAATGACCGGGGTCTGCGCCGT
GCCGCTGATTCCGGCCGCCCAATTTTGGGCATTTGCGCAGGTCTGCAGGTGTTGGGGCGTTCCTTCCGCGCCTCCGGAAA
GATCGTCGAGGGCGTAGGGCTTATCGACGCCACCACTGCGTCCCTAGCCAAACGCACCATCGGGGAACTTCAGTCCACTC
CTACCGCAGCGGGCTTTACTGCAGAGCTCACCGAACCGCTGACTGGTTTTGAAAACCACATGGGCGCCACCATCTTAGGC
CCTGATGCCCAACCGCTGGGTGCTGTAACTCGAGGTGTAGGCAACACGGATCTGCACGGTATTACTACCGCCTCGGTATC
TGATGAACAGGTGTCTTATGAAGGCGCTGTGCAGGGCAATGTGGTGTGCACCTATATGCATGGCCCAGCTTTGGCCCGCA
ACCCGCAGCTTGCGGACCTGCTGCTGGCAAAAGCGATGGGCATTGCCCTTGCTGATCTTGCCCCCTTGGACCTGCCGGTC
GTCGACCAGCTGCGCAAGGAGCGCCTAGCGTAG

Upstream 100 bases:

>100_bases
ATCAAGGCCTGCCCGGCGGGGCGCGTCGAAGTCCTAGCCAACTACACCGCATTCCGCGATCTCAAGCGCGCCATCACCGC
CGCAACCAAGGAGGCTTAAC

Downstream 100 bases:

>100_bases
GTTTCCTACAGCGTCAGTCTGCCGCTCAGCGCACGCGACAGTGTAAGTTCGTCAACGAACTCCAAGTCGCCGCCGAGTGG
CATGCCAGAGGCAAGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSELTIGLILPDVLGTYGDDGNALVLRQRARLRGISAEIHTVRLGEAVPEGLDLYCLGGGEDTAQILAAEHLNNDRGLRR
AADSGRPILGICAGLQVLGRSFRASGKIVEGVGLIDATTASLAKRTIGELQSTPTAAGFTAELTEPLTGFENHMGATILG
PDAQPLGAVTRGVGNTDLHGITTASVSDEQVSYEGAVQGNVVCTYMHGPALARNPQLADLLLAKAMGIALADLAPLDLPV
VDQLRKERLA

Sequences:

>Translated_250_residues
MSELTIGLILPDVLGTYGDDGNALVLRQRARLRGISAEIHTVRLGEAVPEGLDLYCLGGGEDTAQILAAEHLNNDRGLRR
AADSGRPILGICAGLQVLGRSFRASGKIVEGVGLIDATTASLAKRTIGELQSTPTAAGFTAELTEPLTGFENHMGATILG
PDAQPLGAVTRGVGNTDLHGITTASVSDEQVSYEGAVQGNVVCTYMHGPALARNPQLADLLLAKAMGIALADLAPLDLPV
VDQLRKERLA
>Mature_249_residues
SELTIGLILPDVLGTYGDDGNALVLRQRARLRGISAEIHTVRLGEAVPEGLDLYCLGGGEDTAQILAAEHLNNDRGLRRA
ADSGRPILGICAGLQVLGRSFRASGKIVEGVGLIDATTASLAKRTIGELQSTPTAAGFTAELTEPLTGFENHMGATILGP
DAQPLGAVTRGVGNTDLHGITTASVSDEQVSYEGAVQGNVVCTYMHGPALARNPQLADLLLAKAMGIALADLAPLDLPVV
DQLRKERLA

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG3442

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 25992; Mature: 25861

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTIGLILPDVLGTYGDDGNALVLRQRARLRGISAEIHTVRLGEAVPEGLDLYCLGGG
CCCEEEEEEEHHHHHCCCCCCCEEEEECHHHHCCCCCEEEEEEECCCCCCCCEEEEECCC
EDTAQILAAEHLNNDRGLRRAADSGRPILGICAGLQVLGRSFRASGKIVEGVGLIDATTA
CCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHH
SLAKRTIGELQSTPTAAGFTAELTEPLTGFENHMGATILGPDAQPLGAVTRGVGNTDLHG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCC
ITTASVSDEQVSYEGAVQGNVVCTYMHGPALARNPQLADLLLAKAMGIALADLAPLDLPV
EEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
VDQLRKERLA
HHHHHHHHCC
>Mature Secondary Structure 
SELTIGLILPDVLGTYGDDGNALVLRQRARLRGISAEIHTVRLGEAVPEGLDLYCLGGG
CCEEEEEEEHHHHHCCCCCCCEEEEECHHHHCCCCCEEEEEEECCCCCCCCEEEEECCC
EDTAQILAAEHLNNDRGLRRAADSGRPILGICAGLQVLGRSFRASGKIVEGVGLIDATTA
CCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHH
SLAKRTIGELQSTPTAAGFTAELTEPLTGFENHMGATILGPDAQPLGAVTRGVGNTDLHG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCC
ITTASVSDEQVSYEGAVQGNVVCTYMHGPALARNPQLADLLLAKAMGIALADLAPLDLPV
EEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
VDQLRKERLA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]