| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232880
Identifier: 38232880
GI number: 38232880
Start: 219574
End: 220833
Strand: Direct
Name: 38232880
Synonym: DIP0257
Alternate gene names: NA
Gene position: 219574-220833 (Clockwise)
Preceding gene: 38232879
Following gene: 38232881
Centisome position: 8.82
GC content: 54.52
Gene sequence:
>1260_bases ATGTCTTTGAAGGATTATGATGCCGCTCGTCTCGCGCAGGTGCGTGAGGAAGTCACCGCGAAGTATGCGGAGTTGAAGGC TAAGAATCTGTCCTTGGATCTCACTCGCGGTAAGCCTTCTGCGGAGCAGCTGGATTTGTCCAATGATCTGTTGTCGTTGC CGGGTGGGGATTTCCGCACGAAAGATGGTGTGGATTGTCGTAACTATGGTGGCCTGCTGGGTATTGCGGATATTCGTGAG CTGTGGGCTGAGGCGTTGGGTCTGCCTGCTGATCTGGTGGTGGCGCAGGATGGTTCCAGCTTGAACATCATGTTTGATCT GATTTCTTGGTCGTACACGTGGGGTAATAATGATTCGTCACGCCCGTGGTCGGCGGAGGAGAAGGTCAAGTGGTTGTGCC CTGTGCCGGGTTATGATCGTCATTTCACTATCACGGAGCATTTTGGTTTTGAGATGATCAATGTTCCGATGACGGATGAG GGTCCGGATATGGGTGTGGTCCGTGAGTTGGTGAAGGATCCGCAGGTGAAGGGTATGTGGACGGTGCCGGTGTTTGGTAA TCCCACGGGTGTGACGTTCTCTGAGCAGACGTGTCGTGAGCTTGCGGAGATGTCTACCGCGGCCCCTGATTTCCGTATTG TTTGGGATAATGCTTATGCGTTGCACACGCTTAGCGACGAGTTCCCAATTGTGCACAATGTTATTGAATTTGCGCAGGCT GCGGGCAATCCGAACCGCTTCTGGTTCATGAGCTCTACCTCCAAGATCACCCACGCTGGTTCCGGTGTGTCCTTCTTCGC TTCCTCCAAGGAGAACATTGAGTGGTATGCCAGCCACGCTAATGTGCGCGGTATCGGCCCGAACAAGCTCAACCAGCTGG CGCATGCTCAGTTCTTTGGTGATGTGGCGGGTCTTAAGGCGCATATGCTTAAGCATGCGGCGTCGTTGGCTCCGAAGTTT GAGCGTGTGCTCGAGATTCTCGACTCGCGTCTCAGTGAGTACGGTGTGGCTAAGTGGACGAGCCCTACTGGCGGCTACTT CATTTCTGTGGATGTGGTTCCTGGTACGGCATCGCGCGTGGTGGAGCTGGCCAAGGAGGCTGGTATTGCGTTGACTGGTG CTGGTTCTTCCTTCCCGCTGCACAACGACCCTAACAATGAGAACATCCGCTTGGCGCCGTCGTTGCCACCTGTGGCAGAG CTTGAGGTGGCTATGGATGGTTTTGCTACCTGTGTTCTCATGGCAGCCCTTGAGGTGTAA
Upstream 100 bases:
>100_bases TTGGGGGTACTCATTGAGCGGTCCCTTGTCTAAAGTCGTTGGGGTATGAGGTGGGCGTCGTTAAGCGGTGCCCACGGGAC CACGGACCGTAAGGATGCTT
Downstream 100 bases:
>100_bases TGCATGAATTTTGACGAGACGGCCGTGTGGCTTGATGGTGTATTCCCTGGTGAGCTCACGATTCATTCTGCACCCGCGGA GAGTTTTCGAGTAGGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSLKDYDAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRE LWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQA AGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKF ERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAE LEVAMDGFATCVLMAALEV
Sequences:
>Translated_419_residues MSLKDYDAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRE LWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQA AGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKF ERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAE LEVAMDGFATCVLMAALEV >Mature_418_residues SLKDYDAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIREL WAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEG PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA GNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFE RVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAEL EVAMDGFATCVLMAALEV
Specific function: Unknown
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: NA
Molecular weight: Translated: 45786; Mature: 45655
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKDYDAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCHHCCCCCCCCC KDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSS CCCCCHHHCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCC RPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMW CCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEE TVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQA EEEEECCCCCCEECHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHH AGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFG CCCCCEEEEEECCCCEEECCCCEEEEECCCCCCEEEEECCCEECCCHHHHHHHHHHHHHH DVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRV HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCHHHH VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLMAALEV HHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLKDYDAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCHHCCCCCCCCC KDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSS CCCCCHHHCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCC RPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMW CCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEE TVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQA EEEEECCCCCCEECHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHH AGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFG CCCCCEEEEEECCCCEEECCCCEEEEECCCCCCEEEEECCCEECCCHHHHHHHHHHHHHH DVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRV HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCHHHH VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLMAALEV HHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA