| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is idnK [H]
Identifier: 38232877
GI number: 38232877
Start: 218276
End: 218779
Strand: Reverse
Name: idnK [H]
Synonym: DIP0254
Alternate gene names: 38232877
Gene position: 218779-218276 (Counterclockwise)
Preceding gene: 38232878
Following gene: 38232868
Centisome position: 8.79
GC content: 56.55
Gene sequence:
>504_bases GTGAGCACGGCTGTGAAGGTTGTTGTGATGGGTGTGTCTGGGTCGGGTAAGACGACGGTGGGCACGTTGTTGGCTGAGCG GTTGGGGGTGGAGTATCGCGATGGTGATGATCTTCATTCGCAGGCCAATATTGAGAAGATGGCGAGTAGTATTCCGCTTA ACGACGACGACCGCTGGCCGTGGTTGGCGCAGGTGGGCGAATGGTTGGCGGCTCAGCTGGCTGGGGGTGTGATTGGTTGT AGTGCGTTGAAGCGTAGCTACCGTGATGTGTTGCGTCGGGAATGCCCTGAGGTGGTGTTTGTGCACGTGTATGGTTCCCG CGAGGTGTTGTTGGAGCGTATGAATCATCGCGAGGGGCATTTTATGCCGGCGTCGTTGCTGGATTCGCAGTTTGCTACGT TGCAGCCTTTGGAAAATGACGAAGTCGGCCACGTTTTTGATGTGACCGACTCCCCTGCTCAGATTGCTGATGCCGCAGCT AGGTGGCTCAGCGAGCGTAGTTAG
Upstream 100 bases:
>100_bases ATACTTTAGAAATGACTAATTTTAGTGCTGTGGATGATGTGGTTGAGGCGTTTGATACGGCTGCTGATTCTCAGGTTTCT GGAAAGGTGGTCGTTGCGCT
Downstream 100 bases:
>100_bases AAGGCAAAGCTGACTCCGTAGAAGACGAGGACGAATACAAAGCCCACGGCTCCAACGAGCGCTTGGTTGAGTGTCCAGGT GCGCAGGGTCGTGGCAACGT
Product: putative transferase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSTAVKVVVMGVSGSGKTTVGTLLAERLGVEYRDGDDLHSQANIEKMASSIPLNDDDRWPWLAQVGEWLAAQLAGGVIGC SALKRSYRDVLRRECPEVVFVHVYGSREVLLERMNHREGHFMPASLLDSQFATLQPLENDEVGHVFDVTDSPAQIADAAA RWLSERS
Sequences:
>Translated_167_residues MSTAVKVVVMGVSGSGKTTVGTLLAERLGVEYRDGDDLHSQANIEKMASSIPLNDDDRWPWLAQVGEWLAAQLAGGVIGC SALKRSYRDVLRRECPEVVFVHVYGSREVLLERMNHREGHFMPASLLDSQFATLQPLENDEVGHVFDVTDSPAQIADAAA RWLSERS >Mature_166_residues STAVKVVVMGVSGSGKTTVGTLLAERLGVEYRDGDDLHSQANIEKMASSIPLNDDDRWPWLAQVGEWLAAQLAGGVIGCS ALKRSYRDVLRRECPEVVFVHVYGSREVLLERMNHREGHFMPASLLDSQFATLQPLENDEVGHVFDVTDSPAQIADAAAR WLSERS
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=157, Percent_Identity=45.859872611465, Blast_Score=132, Evalue=2e-31, Organism=Escherichia coli, GI1790719, Length=137, Percent_Identity=47.4452554744526, Blast_Score=133, Evalue=7e-33, Organism=Escherichia coli, GI87082265, Length=150, Percent_Identity=44.6666666666667, Blast_Score=122, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25146487, Length=171, Percent_Identity=45.0292397660819, Blast_Score=139, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6320454, Length=149, Percent_Identity=41.6107382550336, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18380; Mature: 18249
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVKVVVMGVSGSGKTTVGTLLAERLGVEYRDGDDLHSQANIEKMASSIPLNDDDRWP CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC WLAQVGEWLAAQLAGGVIGCSALKRSYRDVLRRECPEVVFVHVYGSREVLLERMNHREGH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCC FMPASLLDSQFATLQPLENDEVGHVFDVTDSPAQIADAAARWLSERS CCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure STAVKVVVMGVSGSGKTTVGTLLAERLGVEYRDGDDLHSQANIEKMASSIPLNDDDRWP CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC WLAQVGEWLAAQLAGGVIGCSALKRSYRDVLRRECPEVVFVHVYGSREVLLERMNHREGH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCC FMPASLLDSQFATLQPLENDEVGHVFDVTDSPAQIADAAARWLSERS CCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]