| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is tyrA [H]
Identifier: 38232868
GI number: 38232868
Start: 208253
End: 209263
Strand: Reverse
Name: tyrA [H]
Synonym: DIP0245
Alternate gene names: 38232868
Gene position: 209263-208253 (Counterclockwise)
Preceding gene: 38232877
Following gene: 38232867
Centisome position: 8.41
GC content: 57.86
Gene sequence:
>1011_bases GTGACTATCAATGAGGTTTCTCGTCCTGTCTGTGTCCTTGGCCTTGGTTTGATTGGGGGTTCGCTGCTGCGTGCATTGCG GCACAAAGGTGTTCCGGCGTTTGGTTTTAATCGTTCGCCTTCTGCTGCGCGTATCGCAACAAAGGAGGGGTTTGATGTGA GCTCTAGTCTTATTCAGACTCTAGAGCGTGCTGAGGCTGAAAATGCGTTGATTGTGTTGGCTACGCCGATGCCTGCTATT GCGTCGTTGTTGGATGCGTTGCAGGAGCATGCGCCGAGTTGTGGGTTTACGGATGTGGTGAGCGTGAAGGAGGCGGTGTA TGACCTTGTAAAGTCGCGGGGTTTGCAGTCGCGTTATGTGGGGGGTCATCCGATGGCGGGGACGGCGAATAGTGGTTGGG AGGCTTCGTACCCTGAGTTGTTTGTGCGTGCCCCGTGGGTGGTTACGTATGATTTTGCCCCGGAGGCGGATGCCGAGTGG GTGGGTTTGTGGACTGATGTGGTGAATATGGCGGGCACGGTGGGTGCGGAGGTGATTCCTGCGCGTGTGGAGGCCCATGA TGCGGCGGTGGCTCGTATTTCGCATTTGCCGCATGTGTTTGCGGAGGCTTTGGCGATTGTGGGCGATAATGGTGGCGCGT TGGCGCTTTCGTTGGCGGCGGGTAGTTTCCGCGATTCGACGCGGGTGGCAGGTTCTGCCCCGTCGCTGGTGCGGGCTATG TGTGAGACGAACGCCCAGGCGTTGCTTGGGGCTCTTGATGAGGCTCTTACGTTGCTTAACGACGCTCGCGCGCACCTCAC GGAGGCGCACCCCAACCTTGAGGAGCTTATCGACGCCGGCTATCGCTCCCGTGTGCGCTTCGAAGCACGTTCTGGGGGTA ATGCTTCTGAGTCTGTTGGCCCTACCAAGATTTCCAATCGGCCCGTTTTTCGTTTCCATCCCGGTTCGGACGGTTGGATT GCCCAGCTCAAGCAGGCTGAAGGGTTGGGGGCGCGGATCGAAATATTCTAA
Upstream 100 bases:
>100_bases GAAGGCGCGTACTTGCCATGTGGCGTTGACGCGGGCTACGGTCACAGCAAAATTAGACTTCATACCGCATAACCGTAGTC GGGTATGTAAGACTTGTCAG
Downstream 100 bases:
>100_bases ATTTATGTGATCTTCATTACTAAATGTCGCATACTCTTGCATTTTTACTTTTCCCCATAAAAGAATCTGTTTGCCAGTAG ATATTCAATAAAATATCTTA
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTINEVSRPVCVLGLGLIGGSLLRALRHKGVPAFGFNRSPSAARIATKEGFDVSSSLIQTLERAEAENALIVLATPMPAI ASLLDALQEHAPSCGFTDVVSVKEAVYDLVKSRGLQSRYVGGHPMAGTANSGWEASYPELFVRAPWVVTYDFAPEADAEW VGLWTDVVNMAGTVGAEVIPARVEAHDAAVARISHLPHVFAEALAIVGDNGGALALSLAAGSFRDSTRVAGSAPSLVRAM CETNAQALLGALDEALTLLNDARAHLTEAHPNLEELIDAGYRSRVRFEARSGGNASESVGPTKISNRPVFRFHPGSDGWI AQLKQAEGLGARIEIF
Sequences:
>Translated_336_residues MTINEVSRPVCVLGLGLIGGSLLRALRHKGVPAFGFNRSPSAARIATKEGFDVSSSLIQTLERAEAENALIVLATPMPAI ASLLDALQEHAPSCGFTDVVSVKEAVYDLVKSRGLQSRYVGGHPMAGTANSGWEASYPELFVRAPWVVTYDFAPEADAEW VGLWTDVVNMAGTVGAEVIPARVEAHDAAVARISHLPHVFAEALAIVGDNGGALALSLAAGSFRDSTRVAGSAPSLVRAM CETNAQALLGALDEALTLLNDARAHLTEAHPNLEELIDAGYRSRVRFEARSGGNASESVGPTKISNRPVFRFHPGSDGWI AQLKQAEGLGARIEIF >Mature_335_residues TINEVSRPVCVLGLGLIGGSLLRALRHKGVPAFGFNRSPSAARIATKEGFDVSSSLIQTLERAEAENALIVLATPMPAIA SLLDALQEHAPSCGFTDVVSVKEAVYDLVKSRGLQSRYVGGHPMAGTANSGWEASYPELFVRAPWVVTYDFAPEADAEWV GLWTDVVNMAGTVGAEVIPARVEAHDAAVARISHLPHVFAEALAIVGDNGGALALSLAAGSFRDSTRVAGSAPSLVRAMC ETNAQALLGALDEALTLLNDARAHLTEAHPNLEELIDAGYRSRVRFEARSGGNASESVGPTKISNRPVFRFHPGSDGWIA QLKQAEGLGARIEIF
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 35515; Mature: 35383
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINEVSRPVCVLGLGLIGGSLLRALRHKGVPAFGFNRSPSAARIATKEGFDVSSSLIQT CCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH LERAEAENALIVLATPMPAIASLLDALQEHAPSCGFTDVVSVKEAVYDLVKSRGLQSRYV HHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC GGHPMAGTANSGWEASYPELFVRAPWVVTYDFAPEADAEWVGLWTDVVNMAGTVGAEVIP CCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHH ARVEAHDAAVARISHLPHVFAEALAIVGDNGGALALSLAAGSFRDSTRVAGSAPSLVRAM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH CETNAQALLGALDEALTLLNDARAHLTEAHPNLEELIDAGYRSRVRFEARSGGNASESVG HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHEEEEEECCCCCCCCCCC PTKISNRPVFRFHPGSDGWIAQLKQAEGLGARIEIF CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure TINEVSRPVCVLGLGLIGGSLLRALRHKGVPAFGFNRSPSAARIATKEGFDVSSSLIQT CCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH LERAEAENALIVLATPMPAIASLLDALQEHAPSCGFTDVVSVKEAVYDLVKSRGLQSRYV HHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC GGHPMAGTANSGWEASYPELFVRAPWVVTYDFAPEADAEWVGLWTDVVNMAGTVGAEVIP CCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHH ARVEAHDAAVARISHLPHVFAEALAIVGDNGGALALSLAAGSFRDSTRVAGSAPSLVRAM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH CETNAQALLGALDEALTLLNDARAHLTEAHPNLEELIDAGYRSRVRFEARSGGNASESVG HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHEEEEEECCCCCCCCCCC PTKISNRPVFRFHPGSDGWIAQLKQAEGLGARIEIF CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA