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The map label for this gene is 38232801

Identifier: 38232801

GI number: 38232801

Start: 148133

End: 149326

Strand: Direct

Name: 38232801

Synonym: DIP0176

Alternate gene names: NA

Gene position: 148133-149326 (Clockwise)

Preceding gene: 38232798

Following gene: 38232804

Centisome position: 5.95

GC content: 60.97

Gene sequence:

>1194_bases
ATGGCGTTTGATGTGGCGCGCGTCCGTGGTGCGTACACCTCTATTACCGGTGGGTGGACGTATATGAATGCTCAGCAGCA
GGCTCAGATCCCTGAGCGGGTGGCTGCTGCTGTGGCGCGTGGCTTTCGTAATTCGCCGATTGTGGAGGATGTGGAGCCGG
CTTTTGGTTCTCATGCGCGGGAGCGACATGCTGGGCTTTTTGCTTCTGATGGGTATGAGCGTTCGGCGCGGGTGGCTATT
GCAGATTTGACGGGTACTTCGGCTGATGCGGTGATCCTTGGCCCTAACTTGGAGGTGCTGTTTTCTCAGTTTGCGGCGGC
GGTGTGGCCGTTGGTGCGTCGTGGTTCGTCGGTGGTGATGGCGCATGGTTGTTCGCCGGCGATGACGGTGGGCGCAAAGA
CGCGGTGGGCGCAGCCGGATTTGGGTACGGGTGAGATTCCGGCGTGGCAGTTCGGTTCGCTTGTCGACGGCTCCACGCGC
CTGGTGGCTCTTCGCGCCGCGGATCCCCAGGTGGGCACGATTAACCCCATCCGAGAGATCTCTGAGTACGTTCATGGGGC
TTCTCGCGCATGGCTGCTTGTCGACGCCTCCTCCTTGGCCGGTCATCGTCCCATCACAATGGAGGCATTGGGTGCGGACA
TTGTGGCTCTCGATTGCTCTGCCTTCGGCGGTCCCCAGGTTGCTGCGCTGGCTTTCCGCGATGCCACGATGTTCCCGCGT
CTCGACGCCGACCTGCTCAACAGCAGTGTCGCTCCGGGTCTTGCTGCTGGTGTGTCGGCTGCGGTGGATCATATTGCGGA
TTTGGATGAGTCGGTGCGTGGTACGCGTCGTAACCGTCTTGTGGATAGCATTGAGTCCGCTGGCCTCTATTTGGGCCGCT
TGGGTACCTATTTGGCGGATTCTTTGGATTCGTTGCCTAAGACGCACGTGTTTGGTGTGACTGGCGAGGCCGCCGCGGGT
TCAGACGCCGACCGCATCCCCCATGTGACCTTCTGCATCGATGGCGTGCCGGCTGACCTGATCTATCACCGCTTACTGAG
CAACCGCATCGTGGGGGCGTTGTCCGCCTCCTCGCCGCTTCTCGATGCCATGGGTGCCGAGGACACCCACGGCACCATCA
GTTTGGCTTTGGCGCCGTTTAACACCACTCACGACGTTGACCAGCTGATGCGAGTGGTCGCGAGCTTCGCCTAA

Upstream 100 bases:

>100_bases
GTTCCTGCACAAATGTTAAGCCTAGCTGGCTTTGTGCGGGGATTGAATCTGACAGGCATACTAACTAGGTTCAATTATCA
AAACTAGAGGGAGTTGAGTG

Downstream 100 bases:

>100_bases
ACCTCGAGGACGAGCTTTCCGGTTACCTCCCCATTTTTGAGCATCTCATGGGCCCGCTGGGCCTGCTCTAGGGGGAGCGT
GGCGTGGATGTGGTGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Aminotransferase; Cysteine Desulfurase; Cysteine Desulfurase Catalytic Subunit CsdA; Selenocysteine Lyase; Cysteine Desulfurase-Like Protein; Aminotransferase/Cysteine Desulfurase; Cysteine Desulphurase-Like Protein

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MAFDVARVRGAYTSITGGWTYMNAQQQAQIPERVAAAVARGFRNSPIVEDVEPAFGSHARERHAGLFASDGYERSARVAI
ADLTGTSADAVILGPNLEVLFSQFAAAVWPLVRRGSSVVMAHGCSPAMTVGAKTRWAQPDLGTGEIPAWQFGSLVDGSTR
LVALRAADPQVGTINPIREISEYVHGASRAWLLVDASSLAGHRPITMEALGADIVALDCSAFGGPQVAALAFRDATMFPR
LDADLLNSSVAPGLAAGVSAAVDHIADLDESVRGTRRNRLVDSIESAGLYLGRLGTYLADSLDSLPKTHVFGVTGEAAAG
SDADRIPHVTFCIDGVPADLIYHRLLSNRIVGALSASSPLLDAMGAEDTHGTISLALAPFNTTHDVDQLMRVVASFA

Sequences:

>Translated_397_residues
MAFDVARVRGAYTSITGGWTYMNAQQQAQIPERVAAAVARGFRNSPIVEDVEPAFGSHARERHAGLFASDGYERSARVAI
ADLTGTSADAVILGPNLEVLFSQFAAAVWPLVRRGSSVVMAHGCSPAMTVGAKTRWAQPDLGTGEIPAWQFGSLVDGSTR
LVALRAADPQVGTINPIREISEYVHGASRAWLLVDASSLAGHRPITMEALGADIVALDCSAFGGPQVAALAFRDATMFPR
LDADLLNSSVAPGLAAGVSAAVDHIADLDESVRGTRRNRLVDSIESAGLYLGRLGTYLADSLDSLPKTHVFGVTGEAAAG
SDADRIPHVTFCIDGVPADLIYHRLLSNRIVGALSASSPLLDAMGAEDTHGTISLALAPFNTTHDVDQLMRVVASFA
>Mature_396_residues
AFDVARVRGAYTSITGGWTYMNAQQQAQIPERVAAAVARGFRNSPIVEDVEPAFGSHARERHAGLFASDGYERSARVAIA
DLTGTSADAVILGPNLEVLFSQFAAAVWPLVRRGSSVVMAHGCSPAMTVGAKTRWAQPDLGTGEIPAWQFGSLVDGSTRL
VALRAADPQVGTINPIREISEYVHGASRAWLLVDASSLAGHRPITMEALGADIVALDCSAFGGPQVAALAFRDATMFPRL
DADLLNSSVAPGLAAGVSAAVDHIADLDESVRGTRRNRLVDSIESAGLYLGRLGTYLADSLDSLPKTHVFGVTGEAAAGS
DADRIPHVTFCIDGVPADLIYHRLLSNRIVGALSASSPLLDAMGAEDTHGTISLALAPFNTTHDVDQLMRVVASFA

Specific function: Unknown

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41697; Mature: 41566

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDVARVRGAYTSITGGWTYMNAQQQAQIPERVAAAVARGFRNSPIVEDVEPAFGSHAR
CCCCHHHHCCCHHEECCCEEEECCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHCHHHH
ERHAGLFASDGYERSARVAIADLTGTSADAVILGPNLEVLFSQFAAAVWPLVRRGSSVVM
HHHCCCEECCCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEE
AHGCSPAMTVGAKTRWAQPDLGTGEIPAWQFGSLVDGSTRLVALRAADPQVGTINPIREI
EECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH
SEYVHGASRAWLLVDASSLAGHRPITMEALGADIVALDCSAFGGPQVAALAFRDATMFPR
HHHHCCCCCEEEEEECHHHCCCCCEEHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCC
LDADLLNSSVAPGLAAGVSAAVDHIADLDESVRGTRRNRLVDSIESAGLYLGRLGTYLAD
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SLDSLPKTHVFGVTGEAAAGSDADRIPHVTFCIDGVPADLIYHRLLSNRIVGALSASSPL
HHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHEEECCCCCCH
LDAMGAEDTHGTISLALAPFNTTHDVDQLMRVVASFA
HHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFDVARVRGAYTSITGGWTYMNAQQQAQIPERVAAAVARGFRNSPIVEDVEPAFGSHAR
CCCHHHHCCCHHEECCCEEEECCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHCHHHH
ERHAGLFASDGYERSARVAIADLTGTSADAVILGPNLEVLFSQFAAAVWPLVRRGSSVVM
HHHCCCEECCCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEE
AHGCSPAMTVGAKTRWAQPDLGTGEIPAWQFGSLVDGSTRLVALRAADPQVGTINPIREI
EECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH
SEYVHGASRAWLLVDASSLAGHRPITMEALGADIVALDCSAFGGPQVAALAFRDATMFPR
HHHHCCCCCEEEEEECHHHCCCCCEEHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCC
LDADLLNSSVAPGLAAGVSAAVDHIADLDESVRGTRRNRLVDSIESAGLYLGRLGTYLAD
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SLDSLPKTHVFGVTGEAAAGSDADRIPHVTFCIDGVPADLIYHRLLSNRIVGALSASSPL
HHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHEEECCCCCCH
LDAMGAEDTHGTISLALAPFNTTHDVDQLMRVVASFA
HHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA