Click here to switch to the map view.

The map label for this gene is aftA [H]

Identifier: 38232785

GI number: 38232785

Start: 133148

End: 135232

Strand: Reverse

Name: aftA [H]

Synonym: DIP0160

Alternate gene names: 38232785

Gene position: 135232-133148 (Counterclockwise)

Preceding gene: 38232786

Following gene: 38232784

Centisome position: 5.43

GC content: 56.12

Gene sequence:

>2085_bases
ATGTCAAGACCATGTGCCAAACTGTTATCTATGACTGAATCTGCCCCGAGTAAACATGCCTCCCCTTCAGGGGGTTCTTC
GCAGGTGCGTGCGCAAAGGAATACCACCCAGGGAGAGGCTTCAGACTCAGAGCTCACATCCGTGGTGATGTACGCCCCGG
ATCAGCTCTCTGCAAAAGCTACTCTGATTGCCATTGTGGCCACGATCTTTGGTAGCTCCATCTGTACTTTGGGCTTGTGG
TATCTCCTCAAGGTGGTCAAACTGCCACCGTTTGGTGGTTCGCAGGTCACCAAGGCGGGCGCTACCGTGGGTATCTTCCT
TACCCTGCTAGTAACCTGCATTTTTGTGCTGTGGTGGATGGCAGATGACAAGAGGGGCACCACGCGGCCGCGCTGGCGCA
CGTGGATCACCTATGCGGTGACCCATATGGCACCGGCTGGTTTGGTCATGGCAGCCATTGGTGTGCCGCTCTCTCCAAGC
CGCCTGTACTTGGAAGGCATTACGGTTGACCAGGGCTTCCGCACCCAGTTCCTTACCCGTCTGACGGCTACGCAGGGGCT
ACCGGATATGAACTATGCTGATCTTCCGGCGTATTACCCAGGTGCGTGGTTCTGGTTAGGTGCGCGGTTTGCGCAGCTTA
TTGGGTACCCGGGGTGGGCGATCTATCAGCCGTGGGCATTGTTGAGCATTGCGGTGACTGGCTGTGTGTTGGTGCCTGTG
TGGCAGCGATTGGTGGGCAGCTTGCCTGTTGCTACGGCAATTGCGCTGGTCACTACCGCTATTGCTCTAACACTGTGTGC
TTTTGAGCCTTATGCCTGTGTGATTGCTATGGGCATTCCTGCAGCACTGGTGATGGGGCGTCGTGCGCTATCAGGCCAGA
AGCTGGCCACCGTGGGTGTAGTGGTGTACTTGGGCGCTTCCGCTTCCACATACACCTTGTACACTGCGGTGATTGCGCTG
AGCTTGGTCACGGTTTCGGGCCTGTTCTTCGCATTCGTGCTTCGTTCGTGGCGGCCGATTCGTCAGATCATCGTTATCGG
CGTGTCCTCGATGGCTATCGCCTCGATTGTGTGGGGACCATACTTGTGGCTGCGGTTTACCGGCCATTACGAGGGCACCG
CAGCGGCCTCTCACTTCCTCCCACCTGAGGGAACCGTGGTGCCACTGCCAATGTTTGCCACCAGCTTTGTTGGCGTGCTG
TGCTTTATCGGCTTGATCTACCTGATCATGCGTGTGATGGATCCCGATGTGTGCGCTATGGGCGTCGGCTTGGCCGTAAT
GTACCTCTGGGTTATCGCCTCGATGTCTGTTGCGCTGAGCGGAACCACACTGCTGGGATTCCGCCTGGATTCGGTCATCA
CCATCATTCTGGGTACCGCAGGTGTGCTCGGTCTTGCCGAGTTGCGCCTTGTGGCAGTGCACCGCTTCTATCCTGTGCAG
TTTTCTACAAGCTTGTCCACGCGTATCAATGTGATCTGCGTGGTGGTCTTGGCGTTGGCGGGTATTCAGTATGCGCAGGC
AATTCCAGATCGTAACGCACACGCCATTGAGCTCGCGTACACCAACACCGATGGCGACGGTCACCGTGCTGACTTCTTGC
CACCGGATGCAACGCAGTACTACGCGGAAGTAGATCGTGTGATCCAAGAAAAGACCGGTAAGCCGGCGGCAGATACTGTG
GTGCTCACCGACGAGTTCAACTTCCTCACCTACTACCCATACCTCGGTTTCCAGGCGTTTACCTCGCACTATGCCAACCC
GTTGGGCGAGTTTGAAAAGCGCAATGCAGTTATCGAGAATTGGGCGTCGCAAAGCTGGGATTCCTTGAAGGACCCCCAAG
ACTTTGATCGTGCCGTATCGAACGTTCCATGGCGTAGCCCCGATGCATTCGTGCTGCGCGCCGATTCCACAGGCTCCTCG
GATTCAAAGGACGGCTGGAACTTCAACCTTGCTATCGACATCTTCCCAAGCAACCCCAACGTATGGTTCAAGGGTGTTCG
CTTTAACCCCGAGGTATTCCAAGGAGAAAATAGCCCATGGACTGTCACCCAAGTAGGACCATTCGTGGTGGTAACGCATG
ACTAA

Upstream 100 bases:

>100_bases
GTCTCACATCACTTTGTAGTGCCCCTTGTGACCGGAAAAGTACTCCGATCTGGTCATAAGGGGCACCATTTTTTGCGTTT
CTAGGTCGGCGCTGCTTGCC

Downstream 100 bases:

>100_bases
GCCTATGAACACTAACATCACCGGCATAAAGTGGGCGGCGATCCTTTCCGGCGTGATCGGCTTCGTCCTGTTCATCATCA
CCCCACTCATGCCCGTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MSRPCAKLLSMTESAPSKHASPSGGSSQVRAQRNTTQGEASDSELTSVVMYAPDQLSAKATLIAIVATIFGSSICTLGLW
YLLKVVKLPPFGGSQVTKAGATVGIFLTLLVTCIFVLWWMADDKRGTTRPRWRTWITYAVTHMAPAGLVMAAIGVPLSPS
RLYLEGITVDQGFRTQFLTRLTATQGLPDMNYADLPAYYPGAWFWLGARFAQLIGYPGWAIYQPWALLSIAVTGCVLVPV
WQRLVGSLPVATAIALVTTAIALTLCAFEPYACVIAMGIPAALVMGRRALSGQKLATVGVVVYLGASASTYTLYTAVIAL
SLVTVSGLFFAFVLRSWRPIRQIIVIGVSSMAIASIVWGPYLWLRFTGHYEGTAAASHFLPPEGTVVPLPMFATSFVGVL
CFIGLIYLIMRVMDPDVCAMGVGLAVMYLWVIASMSVALSGTTLLGFRLDSVITIILGTAGVLGLAELRLVAVHRFYPVQ
FSTSLSTRINVICVVVLALAGIQYAQAIPDRNAHAIELAYTNTDGDGHRADFLPPDATQYYAEVDRVIQEKTGKPAADTV
VLTDEFNFLTYYPYLGFQAFTSHYANPLGEFEKRNAVIENWASQSWDSLKDPQDFDRAVSNVPWRSPDAFVLRADSTGSS
DSKDGWNFNLAIDIFPSNPNVWFKGVRFNPEVFQGENSPWTVTQVGPFVVVTHD

Sequences:

>Translated_694_residues
MSRPCAKLLSMTESAPSKHASPSGGSSQVRAQRNTTQGEASDSELTSVVMYAPDQLSAKATLIAIVATIFGSSICTLGLW
YLLKVVKLPPFGGSQVTKAGATVGIFLTLLVTCIFVLWWMADDKRGTTRPRWRTWITYAVTHMAPAGLVMAAIGVPLSPS
RLYLEGITVDQGFRTQFLTRLTATQGLPDMNYADLPAYYPGAWFWLGARFAQLIGYPGWAIYQPWALLSIAVTGCVLVPV
WQRLVGSLPVATAIALVTTAIALTLCAFEPYACVIAMGIPAALVMGRRALSGQKLATVGVVVYLGASASTYTLYTAVIAL
SLVTVSGLFFAFVLRSWRPIRQIIVIGVSSMAIASIVWGPYLWLRFTGHYEGTAAASHFLPPEGTVVPLPMFATSFVGVL
CFIGLIYLIMRVMDPDVCAMGVGLAVMYLWVIASMSVALSGTTLLGFRLDSVITIILGTAGVLGLAELRLVAVHRFYPVQ
FSTSLSTRINVICVVVLALAGIQYAQAIPDRNAHAIELAYTNTDGDGHRADFLPPDATQYYAEVDRVIQEKTGKPAADTV
VLTDEFNFLTYYPYLGFQAFTSHYANPLGEFEKRNAVIENWASQSWDSLKDPQDFDRAVSNVPWRSPDAFVLRADSTGSS
DSKDGWNFNLAIDIFPSNPNVWFKGVRFNPEVFQGENSPWTVTQVGPFVVVTHD
>Mature_693_residues
SRPCAKLLSMTESAPSKHASPSGGSSQVRAQRNTTQGEASDSELTSVVMYAPDQLSAKATLIAIVATIFGSSICTLGLWY
LLKVVKLPPFGGSQVTKAGATVGIFLTLLVTCIFVLWWMADDKRGTTRPRWRTWITYAVTHMAPAGLVMAAIGVPLSPSR
LYLEGITVDQGFRTQFLTRLTATQGLPDMNYADLPAYYPGAWFWLGARFAQLIGYPGWAIYQPWALLSIAVTGCVLVPVW
QRLVGSLPVATAIALVTTAIALTLCAFEPYACVIAMGIPAALVMGRRALSGQKLATVGVVVYLGASASTYTLYTAVIALS
LVTVSGLFFAFVLRSWRPIRQIIVIGVSSMAIASIVWGPYLWLRFTGHYEGTAAASHFLPPEGTVVPLPMFATSFVGVLC
FIGLIYLIMRVMDPDVCAMGVGLAVMYLWVIASMSVALSGTTLLGFRLDSVITIILGTAGVLGLAELRLVAVHRFYPVQF
STSLSTRINVICVVVLALAGIQYAQAIPDRNAHAIELAYTNTDGDGHRADFLPPDATQYYAEVDRVIQEKTGKPAADTVV
LTDEFNFLTYYPYLGFQAFTSHYANPLGEFEKRNAVIENWASQSWDSLKDPQDFDRAVSNVPWRSPDAFVLRADSTGSSD
SKDGWNFNLAIDIFPSNPNVWFKGVRFNPEVFQGENSPWTVTQVGPFVVVTHD

Specific function: Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the addition of the first key arabinofuranosyl (Araf) residue from th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 85 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020959
- InterPro:   IPR020963 [H]

Pfam domain/function: PF12249 AftA_C; PF12250 AftA_N [H]

EC number: NA

Molecular weight: Translated: 75412; Mature: 75281

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPCAKLLSMTESAPSKHASPSGGSSQVRAQRNTTQGEASDSELTSVVMYAPDQLSAKA
CCCHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHEEEEECCCCCCHHH
TLIAIVATIFGSSICTLGLWYLLKVVKLPPFGGSQVTKAGATVGIFLTLLVTCIFVLWWM
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
ADDKRGTTRPRWRTWITYAVTHMAPAGLVMAAIGVPLSPSRLYLEGITVDQGFRTQFLTR
CCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHH
LTATQGLPDMNYADLPAYYPGAWFWLGARFAQLIGYPGWAIYQPWALLSIAVTGCVLVPV
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
WQRLVGSLPVATAIALVTTAIALTLCAFEPYACVIAMGIPAALVMGRRALSGQKLATVGV
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEE
VVYLGASASTYTLYTAVIALSLVTVSGLFFAFVLRSWRPIRQIIVIGVSSMAIASIVWGP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCC
YLWLRFTGHYEGTAAASHFLPPEGTVVPLPMFATSFVGVLCFIGLIYLIMRVMDPDVCAM
EEEEEEECCCCCCHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GVGLAVMYLWVIASMSVALSGTTLLGFRLDSVITIILGTAGVLGLAELRLVAVHRFYPVQ
HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEE
FSTSLSTRINVICVVVLALAGIQYAQAIPDRNAHAIELAYTNTDGDGHRADFLPPDATQY
ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH
YAEVDRVIQEKTGKPAADTVVLTDEFNFLTYYPYLGFQAFTSHYANPLGEFEKRNAVIEN
HHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHH
WASQSWDSLKDPQDFDRAVSNVPWRSPDAFVLRADSTGSSDSKDGWNFNLAIDIFPSNPN
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCC
VWFKGVRFNPEVFQGENSPWTVTQVGPFVVVTHD
EEEEEEECCCHHCCCCCCCEEEEECCCEEEEECC
>Mature Secondary Structure 
SRPCAKLLSMTESAPSKHASPSGGSSQVRAQRNTTQGEASDSELTSVVMYAPDQLSAKA
CCHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHEEEEECCCCCCHHH
TLIAIVATIFGSSICTLGLWYLLKVVKLPPFGGSQVTKAGATVGIFLTLLVTCIFVLWWM
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
ADDKRGTTRPRWRTWITYAVTHMAPAGLVMAAIGVPLSPSRLYLEGITVDQGFRTQFLTR
CCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHH
LTATQGLPDMNYADLPAYYPGAWFWLGARFAQLIGYPGWAIYQPWALLSIAVTGCVLVPV
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
WQRLVGSLPVATAIALVTTAIALTLCAFEPYACVIAMGIPAALVMGRRALSGQKLATVGV
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEE
VVYLGASASTYTLYTAVIALSLVTVSGLFFAFVLRSWRPIRQIIVIGVSSMAIASIVWGP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCC
YLWLRFTGHYEGTAAASHFLPPEGTVVPLPMFATSFVGVLCFIGLIYLIMRVMDPDVCAM
EEEEEEECCCCCCHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GVGLAVMYLWVIASMSVALSGTTLLGFRLDSVITIILGTAGVLGLAELRLVAVHRFYPVQ
HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEE
FSTSLSTRINVICVVVLALAGIQYAQAIPDRNAHAIELAYTNTDGDGHRADFLPPDATQY
ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH
YAEVDRVIQEKTGKPAADTVVLTDEFNFLTYYPYLGFQAFTSHYANPLGEFEKRNAVIEN
HHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHH
WASQSWDSLKDPQDFDRAVSNVPWRSPDAFVLRADSTGSSDSKDGWNFNLAIDIFPSNPN
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCC
VWFKGVRFNPEVFQGENSPWTVTQVGPFVVVTHD
EEEEEEECCCHHCCCCCCCEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA