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The map label for this gene is osmF [H]

Identifier: 38232782

GI number: 38232782

Start: 128138

End: 129046

Strand: Direct

Name: osmF [H]

Synonym: DIP0157

Alternate gene names: 38232782

Gene position: 128138-129046 (Clockwise)

Preceding gene: 38232781

Following gene: 38232789

Centisome position: 5.15

GC content: 57.1

Gene sequence:

>909_bases
ATGCGTCTTAACATCAGAAGAATCATCGCAGCCACCGTCACCGCCGGAGCTCTCGCGCTTTCTTCCTGTGGATCCATCGA
ATCCATCGAGGGCGGAAGCCACCACAACTCCGACACCATCGTGGTGGGATCGCAGGATTACTACTCCAACGAAATCATCG
CAGAGATTTACTCGCAGGCCCTCGAGGCCAAGGGCTACACCGTGGACCGCCAGTTCCGAATCGGGCAGCGCGAGGTCTAC
GTCGACGAAATCGAATCTGGGCGTATCGACGTCTTCCCCGAATACACCGGCCCACTCCTTCAACACTGGAAACCAGACAC
TGAAGCCCGCGAGAAAACAGAGGTGTATCAGCAGCTCAAAGAAGCACTGCCTGAGCACCTTGTAGCCCTTGACCAGTCAG
CGGCCACCGATCAAGACTCCTATGTGGTCACCGAGGAATTCGCCAAAAAACACCACGTGAACTCCATCGCTGACCTTGCC
GAAGCTGCCAAAAAACAACCCCTCACACTCGGCGCCAACTCTGAGGCCCAAGATCGCCCCAACGGCCCCAAAGGGCTAGA
AAAAACCTACGGTGTGTCCGTCGGCTTTACTCCCATCGAGGATTCTGGCGGACCGCTAACCGTCAAAGCACTACGCGACA
ACTCCATCCAGTTGGCCATCATCTACAGTGCGGACCCGTCGATAAGCACGAACCACCTGACCAACCTCGAAGACCCCAAG
GGGCAATTCCTCGCCTCCCACGTGGTCACCATCGCACACGACGATGTCCCCCTCGGTGCCGCAACCGTGCTCAACAAGGT
CAATGCCACGCTGACAACCGAGCAACTCCGCGAACTCAACGCCCGCTCCGTCAACGAGCAACTACCCAGCTCCGTGATCG
CCAAAGACTGGATCAAACAGCACCTATAA

Upstream 100 bases:

>100_bases
AAAAACGATCTCGGGGTAGTGCGCATGAAGCGCCCCATTACGACCATCGCTGAGCTGCAGCGCCGCAAGCTCGCCACCAC
CTCTGAAGAAAGCCAGCCTC

Downstream 100 bases:

>100_bases
AACCCGAAAAATAGGGGCAGCTAGCGCGGAACACCATGCGTGACTAGCTGCCCTGTTTGCGTGGACACATGAGCGGCGCT
CAACGTCTCAGCAATGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRLNIRRIIAATVTAGALALSSCGSIESIEGGSHHNSDTIVVGSQDYYSNEIIAEIYSQALEAKGYTVDRQFRIGQREVY
VDEIESGRIDVFPEYTGPLLQHWKPDTEAREKTEVYQQLKEALPEHLVALDQSAATDQDSYVVTEEFAKKHHVNSIADLA
EAAKKQPLTLGANSEAQDRPNGPKGLEKTYGVSVGFTPIEDSGGPLTVKALRDNSIQLAIIYSADPSISTNHLTNLEDPK
GQFLASHVVTIAHDDVPLGAATVLNKVNATLTTEQLRELNARSVNEQLPSSVIAKDWIKQHL

Sequences:

>Translated_302_residues
MRLNIRRIIAATVTAGALALSSCGSIESIEGGSHHNSDTIVVGSQDYYSNEIIAEIYSQALEAKGYTVDRQFRIGQREVY
VDEIESGRIDVFPEYTGPLLQHWKPDTEAREKTEVYQQLKEALPEHLVALDQSAATDQDSYVVTEEFAKKHHVNSIADLA
EAAKKQPLTLGANSEAQDRPNGPKGLEKTYGVSVGFTPIEDSGGPLTVKALRDNSIQLAIIYSADPSISTNHLTNLEDPK
GQFLASHVVTIAHDDVPLGAATVLNKVNATLTTEQLRELNARSVNEQLPSSVIAKDWIKQHL
>Mature_302_residues
MRLNIRRIIAATVTAGALALSSCGSIESIEGGSHHNSDTIVVGSQDYYSNEIIAEIYSQALEAKGYTVDRQFRIGQREVY
VDEIESGRIDVFPEYTGPLLQHWKPDTEAREKTEVYQQLKEALPEHLVALDQSAATDQDSYVVTEEFAKKHHVNSIADLA
EAAKKQPLTLGANSEAQDRPNGPKGLEKTYGVSVGFTPIEDSGGPLTVKALRDNSIQLAIIYSADPSISTNHLTNLEDPK
GQFLASHVVTIAHDDVPLGAATVLNKVNATLTTEQLRELNARSVNEQLPSSVIAKDWIKQHL

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=276, Percent_Identity=26.8115942028986, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33011; Mature: 33011

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNIRRIIAATVTAGALALSSCGSIESIEGGSHHNSDTIVVGSQDYYSNEIIAEIYSQA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
LEAKGYTVDRQFRIGQREVYVDEIESGRIDVFPEYTGPLLQHWKPDTEAREKTEVYQQLK
HHHCCCEECCEEECCCCEEEEEHHCCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH
EALPEHLVALDQSAATDQDSYVVTEEFAKKHHVNSIADLAEAAKKQPLTLGANSEAQDRP
HHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
NGPKGLEKTYGVSVGFTPIEDSGGPLTVKALRDNSIQLAIIYSADPSISTNHLTNLEDPK
CCCCCCHHHCCCEECCEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCC
GQFLASHVVTIAHDDVPLGAATVLNKVNATLTTEQLRELNARSVNEQLPSSVIAKDWIKQ
HHHHHHHEEEEECCCCCCCHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HL
CC
>Mature Secondary Structure
MRLNIRRIIAATVTAGALALSSCGSIESIEGGSHHNSDTIVVGSQDYYSNEIIAEIYSQA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
LEAKGYTVDRQFRIGQREVYVDEIESGRIDVFPEYTGPLLQHWKPDTEAREKTEVYQQLK
HHHCCCEECCEEECCCCEEEEEHHCCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH
EALPEHLVALDQSAATDQDSYVVTEEFAKKHHVNSIADLAEAAKKQPLTLGANSEAQDRP
HHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
NGPKGLEKTYGVSVGFTPIEDSGGPLTVKALRDNSIQLAIIYSADPSISTNHLTNLEDPK
CCCCCCHHHCCCEECCEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCC
GQFLASHVVTIAHDDVPLGAATVLNKVNATLTTEQLRELNARSVNEQLPSSVIAKDWIKQ
HHHHHHHEEEEECCCCCCCHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]