| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232751
Identifier: 38232751
GI number: 38232751
Start: 101789
End: 102787
Strand: Reverse
Name: 38232751
Synonym: DIP0123
Alternate gene names: NA
Gene position: 102787-101789 (Counterclockwise)
Preceding gene: 38232756
Following gene: 38232748
Centisome position: 4.13
GC content: 62.06
Gene sequence:
>999_bases ATGCCGAACCGCAGAACACTGAGGAACACGCCGTCCTTTACTAAGCCCACTTCCCCGGCTGCCTCATGTTTGCACCTCAT CCGCCACCTCCAACCAGTCACACGGGCAACACTGGTCAACGGATCAGGTAAATCCCAACCAACCGTCACCCGCGCAGTCG CCGCACTCATGGAAGCGCACCTCGTTCGCGAACGCCCCGACCTCTCCATCCCTCAAGGACCAGGGCGCCCCACCATCCCC ATCGAACTCGCACCTTCACCTTGGGTTCACATCGGCGTCGCAGTAGGCACCCGCGCCACCTACATCGGCGCATACAACAC CCGAGGCATCGCCCTACGGGAAAAGATGATTGAGATCCGGCCGGCGTCGACAAGCATCGATACCTACATCGACGCCATCA CAACCGCCATCACCGAGCTCACCACACTCTCCGAACTGCCACTAGCCAGCATCGGAATCTCCAGCTCCGGCCGAGTATCC CCCACCGGACTCGTCACCGCAGCCAACCTCGGATGGGACCGCCTCGACATCGTCAGCGCACTCTACAAACGAATCCCCGT CCCCATCGCCGTCACCAGCGTGATCACCGCCATCGCCGGCGCGGAACAACAAGCACAAGACCCCAACCATCCCAGCACCA CCCTCATCTTCTACGCCGACGACTCCACCGGTGCAGCACTACAAACCCCCGACAGCATCACCACCGTTCCCATCGACACC TCCTCAGAGGACGTCGCACTGCTCAGCGAAGCAGCCGTCCACCTCGTCGCAGAACACGCCCCCAACAGCATCGTGCTCGC AGGCTCCGCGTTCTCCAACCCCGACGACGCCCGGACCGTAGGCAAAGCACTACGTTCTTCCCCCACCAACCCCAACATAG AAATCCGCGTCTTCCCCACCCACCTGGACAACGCACGCGCCGCCGCCCGAGCAGTAGCCCTCGATCACCTCATCGAAGAC CCACTCGGACTGGCAAAGCGCATCCTCGCATCCTGTTAA
Upstream 100 bases:
>100_bases GCATTTAAAGCATATTTGCAGTTCAAAACATCTATTTATCAAACTTTTGAACACCGTCTAATTTAGACAAGCTGGTCTAC GAACCCCTAAAATTTGACAC
Downstream 100 bases:
>100_bases CGGAAGCGAACATCCTCCACACTCAGCGGAGCACCCAACTCCCCATGCTGAACCGCCACCTCAACATACCGGCCAGCATG GGGAATAAACCCAGCCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MPNRRTLRNTPSFTKPTSPAASCLHLIRHLQPVTRATLVNGSGKSQPTVTRAVAALMEAHLVRERPDLSIPQGPGRPTIP IELAPSPWVHIGVAVGTRATYIGAYNTRGIALREKMIEIRPASTSIDTYIDAITTAITELTTLSELPLASIGISSSGRVS PTGLVTAANLGWDRLDIVSALYKRIPVPIAVTSVITAIAGAEQQAQDPNHPSTTLIFYADDSTGAALQTPDSITTVPIDT SSEDVALLSEAAVHLVAEHAPNSIVLAGSAFSNPDDARTVGKALRSSPTNPNIEIRVFPTHLDNARAAARAVALDHLIED PLGLAKRILASC
Sequences:
>Translated_332_residues MPNRRTLRNTPSFTKPTSPAASCLHLIRHLQPVTRATLVNGSGKSQPTVTRAVAALMEAHLVRERPDLSIPQGPGRPTIP IELAPSPWVHIGVAVGTRATYIGAYNTRGIALREKMIEIRPASTSIDTYIDAITTAITELTTLSELPLASIGISSSGRVS PTGLVTAANLGWDRLDIVSALYKRIPVPIAVTSVITAIAGAEQQAQDPNHPSTTLIFYADDSTGAALQTPDSITTVPIDT SSEDVALLSEAAVHLVAEHAPNSIVLAGSAFSNPDDARTVGKALRSSPTNPNIEIRVFPTHLDNARAAARAVALDHLIED PLGLAKRILASC >Mature_331_residues PNRRTLRNTPSFTKPTSPAASCLHLIRHLQPVTRATLVNGSGKSQPTVTRAVAALMEAHLVRERPDLSIPQGPGRPTIPI ELAPSPWVHIGVAVGTRATYIGAYNTRGIALREKMIEIRPASTSIDTYIDAITTAITELTTLSELPLASIGISSSGRVSP TGLVTAANLGWDRLDIVSALYKRIPVPIAVTSVITAIAGAEQQAQDPNHPSTTLIFYADDSTGAALQTPDSITTVPIDTS SEDVALLSEAAVHLVAEHAPNSIVLAGSAFSNPDDARTVGKALRSSPTNPNIEIRVFPTHLDNARAAARAVALDHLIEDP LGLAKRILASC
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 35042; Mature: 34911
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRRTLRNTPSFTKPTSPAASCLHLIRHLQPVTRATLVNGSGKSQPTVTRAVAALMEAH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHEEECCCCCCCHHHHHHHHHHHHHH LVRERPDLSIPQGPGRPTIPIELAPSPWVHIGVAVGTRATYIGAYNTRGIALREKMIEIR HHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHEEC PASTSIDTYIDAITTAITELTTLSELPLASIGISSSGRVSPTGLVTAANLGWDRLDIVSA CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHH LYKRIPVPIAVTSVITAIAGAEQQAQDPNHPSTTLIFYADDSTGAALQTPDSITTVPIDT HHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCC SSEDVALLSEAAVHLVAEHAPNSIVLAGSAFSNPDDARTVGKALRSSPTNPNIEIRVFPT CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEC HLDNARAAARAVALDHLIEDPLGLAKRILASC CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure PNRRTLRNTPSFTKPTSPAASCLHLIRHLQPVTRATLVNGSGKSQPTVTRAVAALMEAH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHEEECCCCCCCHHHHHHHHHHHHHH LVRERPDLSIPQGPGRPTIPIELAPSPWVHIGVAVGTRATYIGAYNTRGIALREKMIEIR HHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHEEC PASTSIDTYIDAITTAITELTTLSELPLASIGISSSGRVSPTGLVTAANLGWDRLDIVSA CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHH LYKRIPVPIAVTSVITAIAGAEQQAQDPNHPSTTLIFYADDSTGAALQTPDSITTVPIDT HHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCC SSEDVALLSEAAVHLVAEHAPNSIVLAGSAFSNPDDARTVGKALRSSPTNPNIEIRVFPT CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEC HLDNARAAARAVALDHLIEDPLGLAKRILASC CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]