| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232746
Identifier: 38232746
GI number: 38232746
Start: 96976
End: 97758
Strand: Reverse
Name: 38232746
Synonym: DIP0117
Alternate gene names: NA
Gene position: 97758-96976 (Counterclockwise)
Preceding gene: 38232748
Following gene: 38232745
Centisome position: 3.93
GC content: 57.6
Gene sequence:
>783_bases ATGGCAGTTGTCCAGCATCACCTGCCGCTTTCTGCCCGCCTGCCAGCCCGTGGAATCTTCGAGGACGACTGGCGCGATCG GCCGTCGAAACGCCACCCCTATCCCGTCATCCTGATCCACGGAACGGGAGTCACCAAAGGCGATTGGATGGAGCTCGGGC ACGCGCTTCGCAGCCTCGGCTACGCCGTGTGGGCACCGGATTTTGGGATGCGCTCCACCGCAGCCGTAGCGGAATCCGCG GCCCAAGTAGGCGCATATATCGACGCCGTTTTGACCGTCACCAAGGCCAAGAAAGCGATTGTGGTGGGGCATTCGCAAGG CGGAATTTTGGCACGCTATTGGATGCACAACCTCGACGGCGCAAACAAAGTAAGCCACCTCATTTCACTTGCGGTCCCCC ACCACGGCACCTCCCACGGCGGAATGATGAGCCCGCTGGGGCGCACACCGCGTGGTACCGCAGTGATCGATTCCCTTATC ACCGGATTTTTTGGAGCTAGTGGTTTTGAAATGCTGCACGATAGCGAGCTCATTGCGCAGCTCAATGAGCATGGCGACAC CCTGCCGTACGTGTATTACAGCTGCATTGCCACCCGTTCCGACACCATTATCCAGCCGGTAGAATCCTGCTTCCTCCATG GAAAACTTGTGCGCAATATTTATGCGCAAGCAGTATCTAAGCACGCGATCATTTTGCACGAGGACATGCCCCACGATCCG CGAGTACGGCGCCTCGTCATTGCAGAGATAGAAAGAGTGGAAAGGCTAACTATCCCCAGCTAA
Upstream 100 bases:
>100_bases ACATTGCATTATCCTTTCAAGGCTTGTTGATAAATCACTATTATTGGTGTGGTTACACTAACAGTAAAGGCACACGCACT GATAGTACAAGGAGAAAACC
Downstream 100 bases:
>100_bases GGATAGGGTTTCAATCCTTGTTCGCTACTGAAAATAGCAGCACAATGAAGCCCAAGCGACACCGAGTCGCACCATAAAAT CAAGGTAGGCAACGATGACG
Product: putative lipase
Products: NA
Alternate protein names: Triacylglycerol Lipase; Secreted Lipase; Alpha/Beta Hydrolase Fold-Like Protein
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAVVQHHLPLSARLPARGIFEDDWRDRPSKRHPYPVILIHGTGVTKGDWMELGHALRSLGYAVWAPDFGMRSTAAVAESA AQVGAYIDAVLTVTKAKKAIVVGHSQGGILARYWMHNLDGANKVSHLISLAVPHHGTSHGGMMSPLGRTPRGTAVIDSLI TGFFGASGFEMLHDSELIAQLNEHGDTLPYVYYSCIATRSDTIIQPVESCFLHGKLVRNIYAQAVSKHAIILHEDMPHDP RVRRLVIAEIERVERLTIPS
Sequences:
>Translated_260_residues MAVVQHHLPLSARLPARGIFEDDWRDRPSKRHPYPVILIHGTGVTKGDWMELGHALRSLGYAVWAPDFGMRSTAAVAESA AQVGAYIDAVLTVTKAKKAIVVGHSQGGILARYWMHNLDGANKVSHLISLAVPHHGTSHGGMMSPLGRTPRGTAVIDSLI TGFFGASGFEMLHDSELIAQLNEHGDTLPYVYYSCIATRSDTIIQPVESCFLHGKLVRNIYAQAVSKHAIILHEDMPHDP RVRRLVIAEIERVERLTIPS >Mature_259_residues AVVQHHLPLSARLPARGIFEDDWRDRPSKRHPYPVILIHGTGVTKGDWMELGHALRSLGYAVWAPDFGMRSTAAVAESAA QVGAYIDAVLTVTKAKKAIVVGHSQGGILARYWMHNLDGANKVSHLISLAVPHHGTSHGGMMSPLGRTPRGTAVIDSLIT GFFGASGFEMLHDSELIAQLNEHGDTLPYVYYSCIATRSDTIIQPVESCFLHGKLVRNIYAQAVSKHAIILHEDMPHDPR VRRLVIAEIERVERLTIPS
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28540; Mature: 28409
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVQHHLPLSARLPARGIFEDDWRDRPSKRHPYPVILIHGTGVTKGDWMELGHALRSLG CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC YAVWAPDFGMRSTAAVAESAAQVGAYIDAVLTVTKAKKAIVVGHSQGGILARYWMHNLDG CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEHHHHHHCCCC ANKVSHLISLAVPHHGTSHGGMMSPLGRTPRGTAVIDSLITGFFGASGFEMLHDSELIAQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LNEHGDTLPYVYYSCIATRSDTIIQPVESCFLHGKLVRNIYAQAVSKHAIILHEDMPHDP HHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCH RVRRLVIAEIERVERLTIPS HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AVVQHHLPLSARLPARGIFEDDWRDRPSKRHPYPVILIHGTGVTKGDWMELGHALRSLG CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC YAVWAPDFGMRSTAAVAESAAQVGAYIDAVLTVTKAKKAIVVGHSQGGILARYWMHNLDG CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEHHHHHHCCCC ANKVSHLISLAVPHHGTSHGGMMSPLGRTPRGTAVIDSLITGFFGASGFEMLHDSELIAQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LNEHGDTLPYVYYSCIATRSDTIIQPVESCFLHGKLVRNIYAQAVSKHAIILHEDMPHDP HHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCH RVRRLVIAEIERVERLTIPS HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA