| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is dipZ [H]
Identifier: 38232731
GI number: 38232731
Start: 82259
End: 83899
Strand: Direct
Name: dipZ [H]
Synonym: DIP0101
Alternate gene names: 38232731
Gene position: 82259-83899 (Clockwise)
Preceding gene: 38232716
Following gene: 38232735
Centisome position: 3.31
GC content: 56.55
Gene sequence:
>1641_bases ATGTTTGAATTGGCCACAATTGGATTAATCGGTGGCATTGTCACCGGTATATCCCCATGTATCTTGCCGGTTTTGCCGGT GGTTCTCGCCGTGTCGGTGGGCCGCAGACCAACCCATGTGGTTGCTGGCCTAGCGCTCAGCTTTGCCACCATTACGCTGC TGGGCACTGTGATTTTAAGTTCTTTGGGTCTGCCTAAAGATGTATTGCGCTGGACGGGTATCGGCCTGCTGGTGATCGTC GGTTTGAGCATGATGATCCCTAAGCTGGGTGAGCTGGTCGAGGAACCATTTAGTCGCATTCCGCGCCCAACTTTCTTGCA GCAAAAGGCCCGCGACAAGGGTGGCTTTATGATCGGCCTGGCCCTAGGTGCAGTGTATGTTCCCTGCGCAGGTCCTATTC TGGCTGCTATTACCGTCGCCGGTGCGACGGGTGACATCGGTTGGCCAACGGTTGTGCTCACCGTGGCATTTGCCGTAGGT GCGAGCCTTCCGCTGCTGGTGTTTGCGCTGGCGGGTAACAAGATGGGTGAGAAGATCGACGCGATCCGTAAGCACATGAA GCTTGTTGGTGCGGTTATTTTGGCGCTGGCGTTGGCTATGGCGTTGAACATTCCTGAGCGTGTGCAGCGTGCGATCCCCG ACTGGACTGCTGGTGTGCAAAAGCAGATTAGTGAAAATGACACGGTTCGTGGTGCTTTGAGTTCCGGTGGTGGCTCCTTG GCTGCGTGCCGCGACGCCGACCCATCGATGCTGCATGACTGCGGTGAGGCACCGGAATTTGAGGGTTTGACCGGCTGGTT TAACACGGATAAGCCTGTGTCTACGCACAGCGGCCAGGTAACGCTTGTGGACTTTTGGGCCTACGCGTGCATCAACTGCC AGCGTGCGGGTGAGCACATCACCAAGCTTTACGACGCCTACCGCGATGCAGGCCTCCAAGTCGTAGGTGTACACGCCCCC GAATATGGCTTTGAGCACGAGCTTGCCAACGTGAAAGATGCTGCCAAGCGCGAAGGCATTAACTACCCAGTGGCCCAAGA CAACGACTTTGTCACATGGAAGAAGTACAACAACCGCTACTGGCCAGCCCGCTACCTAATCGACGCTCAGGGCAATGTGC GCCACATCCACGAAGGTGAGGGTGCATACAAGGAAACTGAACAACTGGTACGCGAACTCCTGCGTGAAGCAAACCCCCAA GTATCACTGCCGGAGCCAGTAGAAAAGGGCGTCGAAAAGCACGATGCGCAACTCACTCAGCGCCGCAACCCCGAAACCTA CCTCGGCTACGAGCGTGCCCGCTACTTCACCAACAGCAACTACGGCCCAGGTGAACGCACCCTCGAATTCAACGCACCAA AAGTCGGGCAATACACCCTCAGTGGAACCTGGGAGATTGCCTCCGACCACATCAACCCTGTTAAAGACGCTGCACTGTCC GTGAACATTCACGCAGCAACCGTGCAAACAGTTGTCTCCGGCACCGGAACCCTCGAAGTGACCTACCCCGATGGCCACAC CAAGGAATTTAAGGTGGCCGACGGCACCGTCAACGTGGTGGAACAAGACGAGCCTCTCGACGGAATCGTCACCGTGAAGC CATCCCAAGGCGTGAGCTTCTACTCGCTAACCTTCGGCTAA
Upstream 100 bases:
>100_bases TTTTCGCATTGTGAGCAATCCATAGCGGTGGGTGGCTCCGTATCAACTCACAGCAACGTTGAAAACCTAACCACCACTGC GATGAGGGAGTACGTAACAG
Downstream 100 bases:
>100_bases GCCGCATATGAAAAACGGCCAGATGAGTTGGGCACAATGTTGCTGTCCAACCCACCTGGCCGATTTTTATTAGGTGTGGC GTTGAGCGTTGCTCTGAATA
Product: hypothetical protein
Products: DsbDoxidized; DsbGreduced [C]
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MFELATIGLIGGIVTGISPCILPVLPVVLAVSVGRRPTHVVAGLALSFATITLLGTVILSSLGLPKDVLRWTGIGLLVIV GLSMMIPKLGELVEEPFSRIPRPTFLQQKARDKGGFMIGLALGAVYVPCAGPILAAITVAGATGDIGWPTVVLTVAFAVG ASLPLLVFALAGNKMGEKIDAIRKHMKLVGAVILALALAMALNIPERVQRAIPDWTAGVQKQISENDTVRGALSSGGGSL AACRDADPSMLHDCGEAPEFEGLTGWFNTDKPVSTHSGQVTLVDFWAYACINCQRAGEHITKLYDAYRDAGLQVVGVHAP EYGFEHELANVKDAAKREGINYPVAQDNDFVTWKKYNNRYWPARYLIDAQGNVRHIHEGEGAYKETEQLVRELLREANPQ VSLPEPVEKGVEKHDAQLTQRRNPETYLGYERARYFTNSNYGPGERTLEFNAPKVGQYTLSGTWEIASDHINPVKDAALS VNIHAATVQTVVSGTGTLEVTYPDGHTKEFKVADGTVNVVEQDEPLDGIVTVKPSQGVSFYSLTFG
Sequences:
>Translated_546_residues MFELATIGLIGGIVTGISPCILPVLPVVLAVSVGRRPTHVVAGLALSFATITLLGTVILSSLGLPKDVLRWTGIGLLVIV GLSMMIPKLGELVEEPFSRIPRPTFLQQKARDKGGFMIGLALGAVYVPCAGPILAAITVAGATGDIGWPTVVLTVAFAVG ASLPLLVFALAGNKMGEKIDAIRKHMKLVGAVILALALAMALNIPERVQRAIPDWTAGVQKQISENDTVRGALSSGGGSL AACRDADPSMLHDCGEAPEFEGLTGWFNTDKPVSTHSGQVTLVDFWAYACINCQRAGEHITKLYDAYRDAGLQVVGVHAP EYGFEHELANVKDAAKREGINYPVAQDNDFVTWKKYNNRYWPARYLIDAQGNVRHIHEGEGAYKETEQLVRELLREANPQ VSLPEPVEKGVEKHDAQLTQRRNPETYLGYERARYFTNSNYGPGERTLEFNAPKVGQYTLSGTWEIASDHINPVKDAALS VNIHAATVQTVVSGTGTLEVTYPDGHTKEFKVADGTVNVVEQDEPLDGIVTVKPSQGVSFYSLTFG >Mature_546_residues MFELATIGLIGGIVTGISPCILPVLPVVLAVSVGRRPTHVVAGLALSFATITLLGTVILSSLGLPKDVLRWTGIGLLVIV GLSMMIPKLGELVEEPFSRIPRPTFLQQKARDKGGFMIGLALGAVYVPCAGPILAAITVAGATGDIGWPTVVLTVAFAVG ASLPLLVFALAGNKMGEKIDAIRKHMKLVGAVILALALAMALNIPERVQRAIPDWTAGVQKQISENDTVRGALSSGGGSL AACRDADPSMLHDCGEAPEFEGLTGWFNTDKPVSTHSGQVTLVDFWAYACINCQRAGEHITKLYDAYRDAGLQVVGVHAP EYGFEHELANVKDAAKREGINYPVAQDNDFVTWKKYNNRYWPARYLIDAQGNVRHIHEGEGAYKETEQLVRELLREANPQ VSLPEPVEKGVEKHDAQLTQRRNPETYLGYERARYFTNSNYGPGERTLEFNAPKVGQYTLSGTWEIASDHINPVKDAALS VNIHAATVQTVVSGTGTLEVTYPDGHTKEFKVADGTVNVVEQDEPLDGIVTVKPSQGVSFYSLTFG
Specific function: Required To Facilitate The Formation Of Correct Disulfide Bonds In Some Periplasmic Proteins And For The Assembly Of The Periplasmic C-Type Cytochromes. Acts By Transferring Electrons From Cytoplasmic Thioredoxin To The Periplasm, Thereby Maintaining The
COG id: COG0785
COG function: function code O; Cytochrome c biogenesis protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=129, Percent_Identity=34.8837209302326, Blast_Score=83, Evalue=8e-16, Organism=Drosophila melanogaster, GI116007528, Length=129, Percent_Identity=32.5581395348837, Blast_Score=83, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 58834; Mature: 58834
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFELATIGLIGGIVTGISPCILPVLPVVLAVSVGRRPTHVVAGLALSFATITLLGTVILS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLGLPKDVLRWTGIGLLVIVGLSMMIPKLGELVEEPFSRIPRPTFLQQKARDKGGFMIGL HCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE ALGAVYVPCAGPILAAITVAGATGDIGWPTVVLTVAFAVGASLPLLVFALAGNKMGEKID HHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH AIRKHMKLVGAVILALALAMALNIPERVQRAIPDWTAGVQKQISENDTVRGALSSGGGSL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCE AACRDADPSMLHDCGEAPEFEGLTGWFNTDKPVSTHSGQVTLVDFWAYACINCQRAGEHI EEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH TKLYDAYRDAGLQVVGVHAPEYGFEHELANVKDAAKREGINYPVAQDNDFVTWKKYNNRY HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC WPARYLIDAQGNVRHIHEGEGAYKETEQLVRELLREANPQVSLPEPVEKGVEKHDAQLTQ CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH RRNPETYLGYERARYFTNSNYGPGERTLEFNAPKVGQYTLSGTWEIASDHINPVKDAALS CCCCCHHHCHHHHHHCCCCCCCCCCCEEEECCCCCCCEEECCEEEECCCCCCCHHHCEEE VNIHAATVQTVVSGTGTLEVTYPDGHTKEFKVADGTVNVVEQDEPLDGIVTVKPSQGVSF EEEEHHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCEE YSLTFG EEEECC >Mature Secondary Structure MFELATIGLIGGIVTGISPCILPVLPVVLAVSVGRRPTHVVAGLALSFATITLLGTVILS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLGLPKDVLRWTGIGLLVIVGLSMMIPKLGELVEEPFSRIPRPTFLQQKARDKGGFMIGL HCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE ALGAVYVPCAGPILAAITVAGATGDIGWPTVVLTVAFAVGASLPLLVFALAGNKMGEKID HHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH AIRKHMKLVGAVILALALAMALNIPERVQRAIPDWTAGVQKQISENDTVRGALSSGGGSL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCE AACRDADPSMLHDCGEAPEFEGLTGWFNTDKPVSTHSGQVTLVDFWAYACINCQRAGEHI EEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH TKLYDAYRDAGLQVVGVHAPEYGFEHELANVKDAAKREGINYPVAQDNDFVTWKKYNNRY HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC WPARYLIDAQGNVRHIHEGEGAYKETEQLVRELLREANPQVSLPEPVEKGVEKHDAQLTQ CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH RRNPETYLGYERARYFTNSNYGPGERTLEFNAPKVGQYTLSGTWEIASDHINPVKDAALS CCCCCHHHCHHHHHHCCCCCCCCCCCEEEECCCCCCCEEECCEEEECCCCCCCHHHCEEE VNIHAATVQTVVSGTGTLEVTYPDGHTKEFKVADGTVNVVEQDEPLDGIVTVKPSQGVSF EEEEHHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCEE YSLTFG EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]
Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]