| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21675092
Identifier: 21675092
GI number: 21675092
Start: 2153530
End: 2153829
Strand: Reverse
Name: 21675092
Synonym: CT2287
Alternate gene names: NA
Gene position: 2153829-2153530 (Counterclockwise)
Preceding gene: 21675093
Following gene: 21675088
Centisome position: 99.95
GC content: 40.0
Gene sequence:
>300_bases TTGATCATGAGTAAAGCAAAACCACCGAGAGAGCTTGGCGGGATCATAGCTGATGTTTTCTGTAAGATCGGCATGACGGA AGCCTATGATGAATACAAGACACTTCATGCTTGGAAAAACGTGGTCGGAGAAACTATTGCGAAGGTGACATCAGTAGAGA AAATGAAGGATGGAAATCTCTATGTGAAGGTAAAGAGCCCTTCGTGGAGAATGGAACTCAACTTCAGGAAAAGAGATATA ACGAAACGACTCAATAAAGCTGTTGGATATGAAATGATACGAACGATTATCTTTAAATAA
Upstream 100 bases:
>100_bases TTGCAACCAAAGGACAGGTGATCATCACCTCAACGGAGAAAAAAAAGGGGAAGGGTATAAGTTTTTTTTCTGTTGATGAT TACAAGAGTAGTAAGGAGCC
Downstream 100 bases:
>100_bases GATAAAATAGTAATCTTGAGAAAGAATTGAATAAAAGAATTATCAAAAAAAAGGGTCTGTAAGATAAAGTGTGTAAACGG TCATAGTTTCCTATCATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MIMSKAKPPRELGGIIADVFCKIGMTEAYDEYKTLHAWKNVVGETIAKVTSVEKMKDGNLYVKVKSPSWRMELNFRKRDI TKRLNKAVGYEMIRTIIFK
Sequences:
>Translated_99_residues MIMSKAKPPRELGGIIADVFCKIGMTEAYDEYKTLHAWKNVVGETIAKVTSVEKMKDGNLYVKVKSPSWRMELNFRKRDI TKRLNKAVGYEMIRTIIFK >Mature_99_residues MIMSKAKPPRELGGIIADVFCKIGMTEAYDEYKTLHAWKNVVGETIAKVTSVEKMKDGNLYVKVKSPSWRMELNFRKRDI TKRLNKAVGYEMIRTIIFK
Specific function: Unknown
COG id: COG5512
COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11457; Mature: 11457
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMSKAKPPRELGGIIADVFCKIGMTEAYDEYKTLHAWKNVVGETIAKVTSVEKMKDGNL CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YVKVKSPSWRMELNFRKRDITKRLNKAVGYEMIRTIIFK EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIMSKAKPPRELGGIIADVFCKIGMTEAYDEYKTLHAWKNVVGETIAKVTSVEKMKDGNL CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YVKVKSPSWRMELNFRKRDITKRLNKAVGYEMIRTIIFK EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA