| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21675061
Identifier: 21675061
GI number: 21675061
Start: 2116113
End: 2117273
Strand: Direct
Name: 21675061
Synonym: CT2253
Alternate gene names: NA
Gene position: 2116113-2117273 (Clockwise)
Preceding gene: 21675046
Following gene: 21675062
Centisome position: 98.2
GC content: 52.28
Gene sequence:
>1161_bases ATGAGCACAGTTCCTGCTTCCATTCCGGTATTGCAGTGGGCAGCCAGCAGGGCTTGGCTCAGTGATACCGAGCTGAAAAA ACGGTTCAGGAAATGGCCGCTGTGGTTGAAAGGCGAAGCTTCGCCAACTTTGAAACAGTTGGAAGATTTCGCAAAGCTCA CGCATACACCGTTTGGGTATTTTTTCCTACCTGAACCACCAGAGGTGACCTTGCCTGTTCCGGATTTTCGCACTCATCGT GATAACCATTTACGCGAACCAAGCACGGCATTGCTCGACACGATTTATCTGTGCCAGCAACGACAGGAGTGGTTTCGCGA GTATGCCCTAATGCAGGGATTACAGCCATTACGGTTTGTCGGCAGCGCAACACTATCGGACAATCCCGATGCTGTTGCAG CACGCATGCGTCAGGAGCTATCGCTCTCTGTTGATGAACGTCAAGCCCTTCCGACATGGACCGAGGCACTGCGTCAGCTT ATCGCAAAAGCGGAAGAGGCCGGCGTGCTTGTCATGGCCAGTTCCATTGTCGAAAGCAACAATCACAGGAAACTGGATAC GCAAGAGTTCCGCGGTTTTGCGCTGACCGATAACGTGGCACCACTGATTTTTCTGAATGCCGCAGACAGCAAAGCGGCAC AAATGTTCACGCTTGCGCACGAACTGGCGCACATCTGGCTTGCCGAAAGCGGCCTGTCCAATCCGGAAGCAGGCCTGCTT CCCGAACAGCAGATCGAGCGGTGGTGCAACCGTGTCGCTGCCGAATTGCTGGTTCCACACGAGAAACTGCATGACGTTCA TAATCTTCATAATCCCGGCATTACTGTTGACAAGGAAATTCAACGGCTGGCCCGGTTTTTCAAGGTTAGTACACTTGTGG TTTTACGACGTCTTTTCGAAGCGGAATTAATCGACAGAGCGACAATGAACCAATGCTACCAAAAGGAGCTTGATCACATT CTTTCGCCTGAAGGACGCAAAAGCACCGGTGGCGATTTTTACCGAACCCTTGGAGCACGCACCGGGAAGCGCTTTGCACG AGCGATACTCTCCAGTACGCTGGAAGGGCACACCCTGTTCAGGGATGCTTTCCGTCTTTTGGGCGTACAAAAGTCGGCAA CCTTTTACAAAGCTGCGCATGAACTGGGAGTGATGCCATGA
Upstream 100 bases:
>100_bases TGTTATGATCACAATATTCAGTAATATATATGAATAATAAGGCTAATAAGGCATCTTTCAGCCAGACATACATCTGGGAC AAGTCGAGGAGATAGTAACA
Downstream 100 bases:
>100_bases CCTATCTACTCGATGCCAATGTCTTCATCCAGGCAAAAAACCTGCATTATGGTCTTGATTTCTGTCCTGCTTTCTGGGAA TGGTTGATCGAAAGCAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSTVPASIPVLQWAASRAWLSDTELKKRFRKWPLWLKGEASPTLKQLEDFAKLTHTPFGYFFLPEPPEVTLPVPDFRTHR DNHLREPSTALLDTIYLCQQRQEWFREYALMQGLQPLRFVGSATLSDNPDAVAARMRQELSLSVDERQALPTWTEALRQL IAKAEEAGVLVMASSIVESNNHRKLDTQEFRGFALTDNVAPLIFLNAADSKAAQMFTLAHELAHIWLAESGLSNPEAGLL PEQQIERWCNRVAAELLVPHEKLHDVHNLHNPGITVDKEIQRLARFFKVSTLVVLRRLFEAELIDRATMNQCYQKELDHI LSPEGRKSTGGDFYRTLGARTGKRFARAILSSTLEGHTLFRDAFRLLGVQKSATFYKAAHELGVMP
Sequences:
>Translated_386_residues MSTVPASIPVLQWAASRAWLSDTELKKRFRKWPLWLKGEASPTLKQLEDFAKLTHTPFGYFFLPEPPEVTLPVPDFRTHR DNHLREPSTALLDTIYLCQQRQEWFREYALMQGLQPLRFVGSATLSDNPDAVAARMRQELSLSVDERQALPTWTEALRQL IAKAEEAGVLVMASSIVESNNHRKLDTQEFRGFALTDNVAPLIFLNAADSKAAQMFTLAHELAHIWLAESGLSNPEAGLL PEQQIERWCNRVAAELLVPHEKLHDVHNLHNPGITVDKEIQRLARFFKVSTLVVLRRLFEAELIDRATMNQCYQKELDHI LSPEGRKSTGGDFYRTLGARTGKRFARAILSSTLEGHTLFRDAFRLLGVQKSATFYKAAHELGVMP >Mature_385_residues STVPASIPVLQWAASRAWLSDTELKKRFRKWPLWLKGEASPTLKQLEDFAKLTHTPFGYFFLPEPPEVTLPVPDFRTHRD NHLREPSTALLDTIYLCQQRQEWFREYALMQGLQPLRFVGSATLSDNPDAVAARMRQELSLSVDERQALPTWTEALRQLI AKAEEAGVLVMASSIVESNNHRKLDTQEFRGFALTDNVAPLIFLNAADSKAAQMFTLAHELAHIWLAESGLSNPEAGLLP EQQIERWCNRVAAELLVPHEKLHDVHNLHNPGITVDKEIQRLARFFKVSTLVVLRRLFEAELIDRATMNQCYQKELDHIL SPEGRKSTGGDFYRTLGARTGKRFARAILSSTLEGHTLFRDAFRLLGVQKSATFYKAAHELGVMP
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43832; Mature: 43701
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVPASIPVLQWAASRAWLSDTELKKRFRKWPLWLKGEASPTLKQLEDFAKLTHTPFGY CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCE FFLPEPPEVTLPVPDFRTHRDNHLREPSTALLDTIYLCQQRQEWFREYALMQGLQPLRFV EECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GSATLSDNPDAVAARMRQELSLSVDERQALPTWTEALRQLIAKAEEAGVLVMASSIVESN CCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHCC NHRKLDTQEFRGFALTDNVAPLIFLNAADSKAAQMFTLAHELAHIWLAESGLSNPEAGLL CCCCCCHHHHCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PEQQIERWCNRVAAELLVPHEKLHDVHNLHNPGITVDKEIQRLARFFKVSTLVVLRRLFE CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AELIDRATMNQCYQKELDHILSPEGRKSTGGDFYRTLGARTGKRFARAILSSTLEGHTLF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH RDAFRLLGVQKSATFYKAAHELGVMP HHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure STVPASIPVLQWAASRAWLSDTELKKRFRKWPLWLKGEASPTLKQLEDFAKLTHTPFGY CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCE FFLPEPPEVTLPVPDFRTHRDNHLREPSTALLDTIYLCQQRQEWFREYALMQGLQPLRFV EECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GSATLSDNPDAVAARMRQELSLSVDERQALPTWTEALRQLIAKAEEAGVLVMASSIVESN CCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHCC NHRKLDTQEFRGFALTDNVAPLIFLNAADSKAAQMFTLAHELAHIWLAESGLSNPEAGLL CCCCCCHHHHCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PEQQIERWCNRVAAELLVPHEKLHDVHNLHNPGITVDKEIQRLARFFKVSTLVVLRRLFE CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AELIDRATMNQCYQKELDHILSPEGRKSTGGDFYRTLGARTGKRFARAILSSTLEGHTLF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH RDAFRLLGVQKSATFYKAAHELGVMP HHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA