| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is corA [H]
Identifier: 21675011
GI number: 21675011
Start: 2071671
End: 2072498
Strand: Reverse
Name: corA [H]
Synonym: CT2202
Alternate gene names: 21675011
Gene position: 2072498-2071671 (Counterclockwise)
Preceding gene: 21675012
Following gene: 21675010
Centisome position: 96.17
GC content: 57.61
Gene sequence:
>828_bases ATGTCCGTCAGCGATGCCGCAGAGTGCTTCGCCCTGAAAGAGAAATTCAAAGTGCTCTGGATCAATGTCGATGGCCTGCA CGAAACTGGCGTGATCGAAAAGCTCGGGGAGCTGTTCGGCATCGATCCGCTGACGCAGGAGGACATCCTGCACACTGGCC AGCGCCCGAAGGTTGAGGATTTCGAACGCTACCTCTTCCTGTCGCTCCAGATGCTCGACTTCAACCGCGAGACCGGCGAA ATCAGCCAGGAACAGCTGAGCATCGTGCTCGGCCCCGGCTGGCTCATCACCTTTCAGGAAAAGCCGGGCGACACGTTCGA CGCCCTCCGGCAGCGGATCGGCAGCAGCAACGCCAAAGTCAGAAAGCACGAGGCCGATTTTCTTGCTTACGCCCTCGTCG ATTCGGTTGTTGACCACTACTTCTCGATACTCGAAGAGATCGAGAACCGGATCGATATGCTGGACGCCGACCTGATGGCC ACCTTCAGCCAGGAGACCTTCAATGCCCTCAACGCGCTCAAGCGGGAGCTGATCATGTTCCGCAAAGCGGTCTGGCCGTT GCGGGAGATCATCGGCAGCGTCGCGAGAGACGACTTCGCCGTGGTGGGGGACCTGGTCGAGCACTATTTCCGGGATGTGT ATGACCACGTCATTCTCGTGATCGACACGGTCGAGGTGTTCCGGGAGATCGTCACCAGCATGCACGAAACCTGGCTGGCC GGCGTCAACAACCGGATGAACGAAATCATGAAGTTCCTCACCATGATCGCCACGATCTTCATGCCGCTGTCGTTCATTGC CGGGGTTTACGGCATGAACTTCAAATAA
Upstream 100 bases:
>100_bases GATCGGCCAGCCGCCGGGCTCGCTCATCCATATCGGCGAATAGAAGGTCGAGAAGGCTGAAATCACGGTCATCGGCTATG ACGAAAAGCAGACGGTCACG
Downstream 100 bases:
>100_bases ATGCCGGAACTGAACCTCTGGTGGGGCTACTACGCCGTGCTCGGCCTCATGGTGCTGATCGTTCTGGGTTTCATGAAATA TTACCGGTCGAGGAAATGGT
Product: CorA family transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSVSDAAECFALKEKFKVLWINVDGLHETGVIEKLGELFGIDPLTQEDILHTGQRPKVEDFERYLFLSLQMLDFNRETGE ISQEQLSIVLGPGWLITFQEKPGDTFDALRQRIGSSNAKVRKHEADFLAYALVDSVVDHYFSILEEIENRIDMLDADLMA TFSQETFNALNALKRELIMFRKAVWPLREIIGSVARDDFAVVGDLVEHYFRDVYDHVILVIDTVEVFREIVTSMHETWLA GVNNRMNEIMKFLTMIATIFMPLSFIAGVYGMNFK
Sequences:
>Translated_275_residues MSVSDAAECFALKEKFKVLWINVDGLHETGVIEKLGELFGIDPLTQEDILHTGQRPKVEDFERYLFLSLQMLDFNRETGE ISQEQLSIVLGPGWLITFQEKPGDTFDALRQRIGSSNAKVRKHEADFLAYALVDSVVDHYFSILEEIENRIDMLDADLMA TFSQETFNALNALKRELIMFRKAVWPLREIIGSVARDDFAVVGDLVEHYFRDVYDHVILVIDTVEVFREIVTSMHETWLA GVNNRMNEIMKFLTMIATIFMPLSFIAGVYGMNFK >Mature_274_residues SVSDAAECFALKEKFKVLWINVDGLHETGVIEKLGELFGIDPLTQEDILHTGQRPKVEDFERYLFLSLQMLDFNRETGEI SQEQLSIVLGPGWLITFQEKPGDTFDALRQRIGSSNAKVRKHEADFLAYALVDSVVDHYFSILEEIENRIDMLDADLMAT FSQETFNALNALKRELIMFRKAVWPLREIIGSVARDDFAVVGDLVEHYFRDVYDHVILVIDTVEVFREIVTSMHETWLAG VNNRMNEIMKFLTMIATIFMPLSFIAGVYGMNFK
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 31586; Mature: 31455
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSDAAECFALKEKFKVLWINVDGLHETGVIEKLGELFGIDPLTQEDILHTGQRPKVED CCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHH FERYLFLSLQMLDFNRETGEISQEQLSIVLGPGWLITFQEKPGDTFDALRQRIGSSNAKV HHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCHH RKHEADFLAYALVDSVVDHYFSILEEIENRIDMLDADLMATFSQETFNALNALKRELIMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKAVWPLREIIGSVARDDFAVVGDLVEHYFRDVYDHVILVIDTVEVFREIVTSMHETWLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVNNRMNEIMKFLTMIATIFMPLSFIAGVYGMNFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVSDAAECFALKEKFKVLWINVDGLHETGVIEKLGELFGIDPLTQEDILHTGQRPKVED CCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHH FERYLFLSLQMLDFNRETGEISQEQLSIVLGPGWLITFQEKPGDTFDALRQRIGSSNAKV HHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCHH RKHEADFLAYALVDSVVDHYFSILEEIENRIDMLDADLMATFSQETFNALNALKRELIMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKAVWPLREIIGSVARDDFAVVGDLVEHYFRDVYDHVILVIDTVEVFREIVTSMHETWLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVNNRMNEIMKFLTMIATIFMPLSFIAGVYGMNFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]