| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674956
Identifier: 21674956
GI number: 21674956
Start: 2030384
End: 2031529
Strand: Reverse
Name: 21674956
Synonym: CT2147
Alternate gene names: NA
Gene position: 2031529-2030384 (Counterclockwise)
Preceding gene: 21674958
Following gene: 21674955
Centisome position: 94.27
GC content: 52.18
Gene sequence:
>1146_bases ATGACCAATGCGTTTAAAGGTATTCCAGAGGAGCTGCTCAAACCTCATGCTTCTCCTTGTGTTTCGATCTTCATGCCTAC CAGTCGAACCTTTCCTGATAATACACAGGACCCTGTTCGGTTCAAGAATCTTGTTTCTAGGGCCGAAGCCGATGGCATTG CTTTCAGCACAAAACGTGAGATGGCTCCTTTGATCGAACGATTACGCCTTTTACAGGATGATGCTTCTTTCTGGAATCAT ACGCTTGACGGTTTAGCTGTTTTCATCTCTCCTGATTATTTCAGGATATTTCGTCTTCAGCAAAGTGTGCTTGAACAGGC TCATGTTACCGATGCTTTTTATATCAGGCCGTTGATCAGGATTTATCAGATTGTCGAGCGTTTTCAGGTACTTGCGCTGA CCCGAAGTGAGGTGAAACTTTATGAGGGTACCCGAGACCATCTTGATGAAATCGAGCTTGCGCCAGAGGTACCGAAAACG ATGACGGATGCACTCGGTACGGAAATTACCCCACCGCATATGACGATTGCTTCGTATGGCGGAACCGGTACCGCCATGCG TCACGGGCACTCGTCAAGAAAGGACGAAGAGGCGCTGGATAACGAACGCTTTTTCCGGGCTGTTGATCAGGGGATCAACG AATACCACTCCAGTTCCTCCGGTCTGCCGCTTGTGCTGGTGGCTCTTCCGGAGCATCAGGGGCTGTTCAGATCGATCAGC CGCAATCAGCGTCTGGTTGCCGAGGGAATAGAGATTGATCCGGCGGCGCTTGGTCTTGAAGCCATGCGTCAAAAGGCCTG GCAGGTAATGGAGCCTTACCGGGAGCGGAAGATCGATCAGATGATCGCCCGTTTCAGAGAGGCTGAAGGTGGCAAGCTTG GGTCAGACAATCCGTATGCTATCGCAATCGCCGCCGTGGCGGGAAACGTCTCGCATCTCTTGCTTGATGGGCAGAAATTC TGGCCTGGCCAGATCGATCCTGTTTCAGGTGACATTCTGCTCGACGAGGCCTCACAGGCTTCCGGCCGTGATGTGTTTGA AGAGCTGGGCGCTGCGGTACTTGCCCGAGGAGGTGAGGTTCTCGTACTGCCATCGGAAAGAATGCCCTCTGCCTCGGGTG TTGCGGCTATATTCCGGCACGATTAG
Upstream 100 bases:
>100_bases TTCTCCAGTTTCTGAACTTCAGCCTCATTCTCGTTGTTATCCTTCAGTTACCCATAGCTTTTGACTGCCTGTGACCAACG CGCAATAATGGAGGTGAACC
Downstream 100 bases:
>100_bases TAAGATTGTCGTGTCGGTAAGATAATGCCGGCAGAAAACGGGAGCGTCGGGTTGCTGAGCCCTTGTTCCTGTTTACGCCA TTGACCACTTATATTGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTNAFKGIPEELLKPHASPCVSIFMPTSRTFPDNTQDPVRFKNLVSRAEADGIAFSTKREMAPLIERLRLLQDDASFWNH TLDGLAVFISPDYFRIFRLQQSVLEQAHVTDAFYIRPLIRIYQIVERFQVLALTRSEVKLYEGTRDHLDEIELAPEVPKT MTDALGTEITPPHMTIASYGGTGTAMRHGHSSRKDEEALDNERFFRAVDQGINEYHSSSSGLPLVLVALPEHQGLFRSIS RNQRLVAEGIEIDPAALGLEAMRQKAWQVMEPYRERKIDQMIARFREAEGGKLGSDNPYAIAIAAVAGNVSHLLLDGQKF WPGQIDPVSGDILLDEASQASGRDVFEELGAAVLARGGEVLVLPSERMPSASGVAAIFRHD
Sequences:
>Translated_381_residues MTNAFKGIPEELLKPHASPCVSIFMPTSRTFPDNTQDPVRFKNLVSRAEADGIAFSTKREMAPLIERLRLLQDDASFWNH TLDGLAVFISPDYFRIFRLQQSVLEQAHVTDAFYIRPLIRIYQIVERFQVLALTRSEVKLYEGTRDHLDEIELAPEVPKT MTDALGTEITPPHMTIASYGGTGTAMRHGHSSRKDEEALDNERFFRAVDQGINEYHSSSSGLPLVLVALPEHQGLFRSIS RNQRLVAEGIEIDPAALGLEAMRQKAWQVMEPYRERKIDQMIARFREAEGGKLGSDNPYAIAIAAVAGNVSHLLLDGQKF WPGQIDPVSGDILLDEASQASGRDVFEELGAAVLARGGEVLVLPSERMPSASGVAAIFRHD >Mature_380_residues TNAFKGIPEELLKPHASPCVSIFMPTSRTFPDNTQDPVRFKNLVSRAEADGIAFSTKREMAPLIERLRLLQDDASFWNHT LDGLAVFISPDYFRIFRLQQSVLEQAHVTDAFYIRPLIRIYQIVERFQVLALTRSEVKLYEGTRDHLDEIELAPEVPKTM TDALGTEITPPHMTIASYGGTGTAMRHGHSSRKDEEALDNERFFRAVDQGINEYHSSSSGLPLVLVALPEHQGLFRSISR NQRLVAEGIEIDPAALGLEAMRQKAWQVMEPYRERKIDQMIARFREAEGGKLGSDNPYAIAIAAVAGNVSHLLLDGQKFW PGQIDPVSGDILLDEASQASGRDVFEELGAAVLARGGEVLVLPSERMPSASGVAAIFRHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42378; Mature: 42246
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAFKGIPEELLKPHASPCVSIFMPTSRTFPDNTQDPVRFKNLVSRAEADGIAFSTKRE CCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECHHHH MAPLIERLRLLQDDASFWNHTLDGLAVFISPDYFRIFRLQQSVLEQAHVTDAFYIRPLIR HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH IYQIVERFQVLALTRSEVKLYEGTRDHLDEIELAPEVPKTMTDALGTEITPPHMTIASYG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECC GTGTAMRHGHSSRKDEEALDNERFFRAVDQGINEYHSSSSGLPLVLVALPEHQGLFRSIS CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH RNQRLVAEGIEIDPAALGLEAMRQKAWQVMEPYRERKIDQMIARFREAEGGKLGSDNPYA CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE IAIAAVAGNVSHLLLDGQKFWPGQIDPVSGDILLDEASQASGRDVFEELGAAVLARGGEV EEEEEHHCCHHEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCE LVLPSERMPSASGVAAIFRHD EEECCCCCCCCCCEEEHEECC >Mature Secondary Structure TNAFKGIPEELLKPHASPCVSIFMPTSRTFPDNTQDPVRFKNLVSRAEADGIAFSTKRE CCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECHHHH MAPLIERLRLLQDDASFWNHTLDGLAVFISPDYFRIFRLQQSVLEQAHVTDAFYIRPLIR HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH IYQIVERFQVLALTRSEVKLYEGTRDHLDEIELAPEVPKTMTDALGTEITPPHMTIASYG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECC GTGTAMRHGHSSRKDEEALDNERFFRAVDQGINEYHSSSSGLPLVLVALPEHQGLFRSIS CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH RNQRLVAEGIEIDPAALGLEAMRQKAWQVMEPYRERKIDQMIARFREAEGGKLGSDNPYA CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE IAIAAVAGNVSHLLLDGQKFWPGQIDPVSGDILLDEASQASGRDVFEELGAAVLARGGEV EEEEEHHCCHHEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCE LVLPSERMPSASGVAAIFRHD EEECCCCCCCCCCEEEHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA